RNA–Protein interactions for RNA: ENST00000624680.1

AP003499.3-201, humanhuman

BASIC

Gene AP003499.3, Length 857 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003499.3-201ENST00000624680 AEBP2Q6ZN18 517 aaPredicted RBP26.13■■□□□ 1.77
AP003499.3-201ENST00000624680 CHIC1Q5VXU3 224 aa25.67■■□□□ 1.7
AP003499.3-201ENST00000624680 PHF23Q9BUL5 403 aaPredicted RBP22.61■■□□□ 1.21
AP003499.3-201ENST00000624680 SENP3Q9H4L4 574 aaPredicted RBP22.13■■□□□ 1.13
AP003499.3-201ENST00000624680 PLPPR3Q6T4P5 718 aa20.92■□□□□ 0.94
AP003499.3-201ENST00000624680 NISCHQ9Y2I1 1504 aa20.64■□□□□ 0.9
AP003499.3-201ENST00000624680 FOXD1Q16676 465 aa20.53■□□□□ 0.88
AP003499.3-201ENST00000624680 PPP6R1Q9UPN7 881 aa19.9■□□□□ 0.78
AP003499.3-201ENST00000624680 ADRA2BP18089 450 aa19.89■□□□□ 0.77
AP003499.3-201ENST00000624680 PIAS4Q8N2W9 510 aaPredicted RBP19.4■□□□□ 0.7
AP003499.3-201ENST00000624680 MSH5O43196 834 aa18.84■□□□□ 0.61
AP003499.3-201ENST00000624680 ABCC9O60706 1549 aa18.56■□□□□ 0.56
AP003499.3-201ENST00000624680 CCDC180Q9P1Z9 1646 aa18.51■□□□□ 0.55
AP003499.3-201ENST00000624680 PPP4R3CPQ6ZMV5 832 aa18.47■□□□□ 0.55
AP003499.3-201ENST00000624680 KCNA4P22459 653 aa18.25■□□□□ 0.51
AP003499.3-201ENST00000624680 SCAF1Q9H7N4 1312 aaKnown RBP18.17■□□□□ 0.5
AP003499.3-201ENST00000624680 NCBP3Q53F19 620 aaKnown RBP18.02■□□□□ 0.48
AP003499.3-201ENST00000624680 MAPK8IP2Q13387 824 aaPredicted RBP18■□□□□ 0.47
AP003499.3-201ENST00000624680 CNKSR2Q8WXI2 1034 aa17.9■□□□□ 0.46
AP003499.3-201ENST00000624680 NPM3O75607 178 aaKnown RBP17.78■□□□□ 0.44
AP003499.3-201ENST00000624680 DMRT2Q9Y5R5 561 aa17.7■□□□□ 0.42
AP003499.3-201ENST00000624680 DCAF8L2P0C7V8 631 aa17.65■□□□□ 0.42
AP003499.3-201ENST00000624680 RB1CC1Q8TDY2 1594 aa17.65■□□□□ 0.42
AP003499.3-201ENST00000624680 NACADO15069 1562 aa17.51■□□□□ 0.39
AP003499.3-201ENST00000624680 RNF216Q9NWF9 866 aaPredicted RBP17.51■□□□□ 0.39
AP003499.3-201ENST00000624680 SLC4A1APQ9BWU0 796 aaKnown RBP17.4■□□□□ 0.38
AP003499.3-201ENST00000624680 HOXD11P31277 338 aaPredicted RBP17.39■□□□□ 0.37
AP003499.3-201ENST00000624680 DNAJC5BQ9UF47 199 aa17.38■□□□□ 0.37
AP003499.3-201ENST00000624680 PABPN1Q86U42 306 aaKnown RBP eCLIP17.33■□□□□ 0.36
AP003499.3-201ENST00000624680 UNC13AQ9UPW8 1703 aa17.26■□□□□ 0.35
AP003499.3-201ENST00000624680 MYO15BQ96JP2 1530 aa17.21■□□□□ 0.34
AP003499.3-201ENST00000624680 EHMT2Q96KQ7 1210 aa17.11■□□□□ 0.33
AP003499.3-201ENST00000624680 BICRAQ9NZM4 1560 aa17.07■□□□□ 0.32
AP003499.3-201ENST00000624680 ZCCHC6Q5VYS8 1495 aaKnown RBP17.07■□□□□ 0.32
AP003499.3-201ENST00000624680 DCAF1Q9Y4B6 1507 aa17.01■□□□□ 0.31
AP003499.3-201ENST00000624680 DCAF8L1A6NGE4 600 aa16.93■□□□□ 0.3
AP003499.3-201ENST00000624680 SCRIBQ14160 1630 aa16.91■□□□□ 0.3
AP003499.3-201ENST00000624680 POTEDQ86YR6 584 aa16.87■□□□□ 0.29
AP003499.3-201ENST00000624680 CSRNP3Q8WYN3 585 aa16.83■□□□□ 0.28
AP003499.3-201ENST00000624680 SHROOM4Q9ULL8 1493 aa16.81■□□□□ 0.28
AP003499.3-201ENST00000624680 ZBTB22O15209 634 aa16.79■□□□□ 0.28
AP003499.3-201ENST00000624680 SLC4A2P04920 1241 aa16.75■□□□□ 0.27
AP003499.3-201ENST00000624680 CC2D2AQ9P2K1 1620 aa16.74■□□□□ 0.27
AP003499.3-201ENST00000624680 FOXD4L1Q9NU39 408 aa16.72■□□□□ 0.27
AP003499.3-201ENST00000624680 CECR2Q9BXF3 1484 aa16.7■□□□□ 0.26
AP003499.3-201ENST00000624680 EIF4G1Q04637 1599 aaKnown RBP16.68■□□□□ 0.26
AP003499.3-201ENST00000624680 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.58■□□□□ 0.24
AP003499.3-201ENST00000624680 MYCNP04198 464 aaPredicted RBP16.41■□□□□ 0.22
AP003499.3-201ENST00000624680 U3KPZ7 1027 aaPredicted RBP16.34■□□□□ 0.21
AP003499.3-201ENST00000624680 RNF39Q9H2S5 420 aa16.17■□□□□ 0.18
AP003499.3-201ENST00000624680 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.16■□□□□ 0.18
AP003499.3-201ENST00000624680 HNRNPUL2Q1KMD3 747 aaKnown RBP16.16■□□□□ 0.18
AP003499.3-201ENST00000624680 NCAPD3P42695 1498 aa16.16■□□□□ 0.18
AP003499.3-201ENST00000624680 ATXN8OSP0DMR3 200 aa16.12■□□□□ 0.17
AP003499.3-201ENST00000624680 SAMD1Q6SPF0 538 aaPredicted RBP16.12■□□□□ 0.17
AP003499.3-201ENST00000624680 ATAD2BQ9ULI0 1458 aa16.11■□□□□ 0.17
AP003499.3-201ENST00000624680 SMARCA4P51532 1647 aa16.1■□□□□ 0.17
AP003499.3-201ENST00000624680 SMARCA2P51531 1590 aa16.09■□□□□ 0.17
AP003499.3-201ENST00000624680 ERCC6Q03468 1493 aa16.05■□□□□ 0.16
AP003499.3-201ENST00000624680 BAZ1AQ9NRL2 1556 aaPredicted RBP16.04■□□□□ 0.16
AP003499.3-201ENST00000624680 HMGXB3Q12766 1538 aa16■□□□□ 0.15
AP003499.3-201ENST00000624680 BAZ1BQ9UIG0 1483 aaKnown RBP15.99■□□□□ 0.15
AP003499.3-201ENST00000624680 C1QBPQ07021 282 aaKnown RBP15.98■□□□□ 0.15
AP003499.3-201ENST00000624680 ATF5Q9Y2D1 282 aaPredicted RBP15.98■□□□□ 0.15
AP003499.3-201ENST00000624680 DNAJC5Q9H3Z4 198 aa15.97■□□□□ 0.15
AP003499.3-201ENST00000624680 APLP2Q06481 763 aa15.96■□□□□ 0.15
AP003499.3-201ENST00000624680 CUX2O14529 1486 aa15.94■□□□□ 0.14
AP003499.3-201ENST00000624680 NESP48681 1621 aa15.93■□□□□ 0.14
AP003499.3-201ENST00000624680 MROH2BQ7Z745 1585 aa15.92■□□□□ 0.14
AP003499.3-201ENST00000624680 PEG3Q9GZU2 1588 aa15.89■□□□□ 0.13
AP003499.3-201ENST00000624680 SPINK5Q9NQ38 1064 aaPredicted RBP15.84■□□□□ 0.13
AP003499.3-201ENST00000624680 LAMC3Q9Y6N6 1575 aa15.8■□□□□ 0.12
AP003499.3-201ENST00000624680 CAPN15O75808 1086 aa15.76■□□□□ 0.11
AP003499.3-201ENST00000624680 WIZO95785 1651 aa15.76■□□□□ 0.11
AP003499.3-201ENST00000624680 PDS5BQ9NTI5 1447 aa15.75■□□□□ 0.11
AP003499.3-201ENST00000624680 KIF21AQ7Z4S6 1674 aa15.73■□□□□ 0.11
AP003499.3-201ENST00000624680 TRHP20396 242 aaPredicted RBP15.73■□□□□ 0.11
AP003499.3-201ENST00000624680 ZNF219Q9P2Y4 722 aaPredicted RBP15.71■□□□□ 0.11
AP003499.3-201ENST00000624680 THOC2Q8NI27 1593 aaKnown RBP15.7■□□□□ 0.1
AP003499.3-201ENST00000624680 CADPSQ9ULU8 1353 aa15.7■□□□□ 0.1
AP003499.3-201ENST00000624680 CACNB1Q02641 598 aaPredicted RBP15.63■□□□□ 0.09
AP003499.3-201ENST00000624680 RSF1Q96T23 1441 aaPredicted RBP15.6■□□□□ 0.09
AP003499.3-201ENST00000624680 MRC2Q9UBG0 1479 aa15.58■□□□□ 0.08
AP003499.3-201ENST00000624680 CEP164Q9UPV0 1460 aa15.53■□□□□ 0.08
AP003499.3-201ENST00000624680 POLA2Q14181 598 aa15.52■□□□□ 0.08
AP003499.3-201ENST00000624680 TOP2AP11388 1531 aaKnown RBP15.52■□□□□ 0.07
AP003499.3-201ENST00000624680 FANCD2Q9BXW9 1451 aa15.52■□□□□ 0.07
AP003499.3-201ENST00000624680 WDR62O43379 1518 aa15.5■□□□□ 0.07
AP003499.3-201ENST00000624680 ABCB7O75027 752 aa15.49■□□□□ 0.07
AP003499.3-201ENST00000624680 CFTRP13569 1480 aa15.48■□□□□ 0.07
AP003499.3-201ENST00000624680 DSG3P32926 999 aa15.45■□□□□ 0.06
AP003499.3-201ENST00000624680 TRIM41Q8WV44 630 aa15.38■□□□□ 0.05
AP003499.3-201ENST00000624680 PRDM2Q13029 1718 aa15.37■□□□□ 0.05
AP003499.3-201ENST00000624680 CCDC88BA6NC98 1476 aa15.37■□□□□ 0.05
AP003499.3-201ENST00000624680 URB2Q14146 1524 aaKnown RBP15.36■□□□□ 0.05
AP003499.3-201ENST00000624680 OSCARQ8IYS5 282 aa15.33■□□□□ 0.04
AP003499.3-201ENST00000624680 MKRN4PQ13434 485 aaPredicted RBP15.29■□□□□ 0.04
AP003499.3-201ENST00000624680 FBLN2P98095 1184 aa15.28■□□□□ 0.04
AP003499.3-201ENST00000624680 ZBTB12Q9Y330 459 aaPredicted RBP15.25■□□□□ 0.03
AP003499.3-201ENST00000624680 IFT140Q96RY7 1462 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms