RNA–Protein interactions for RNA: ENST00000619009.4

BARD1-213, Transcript of BRCA1 associated RING domain 1, humanhuman

TSL 1 (best) BASIC

Gene BARD1, Length 3,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BARD1-213ENST00000619009 NISCHQ9Y2I1 1504 aa18.94■□□□□ 0.62
BARD1-213ENST00000619009 DCAF8L2P0C7V8 631 aa17.56■□□□□ 0.4
BARD1-213ENST00000619009 SHROOM4Q9ULL8 1493 aa16.97■□□□□ 0.31
BARD1-213ENST00000619009 SUPT5HO00267 1087 aaKnown RBP16.59■□□□□ 0.25
BARD1-213ENST00000619009 PPARGC1BQ86YN6 1023 aaKnown RBP16.34■□□□□ 0.21
BARD1-213ENST00000619009 HRCP23327 699 aa16.33■□□□□ 0.2
BARD1-213ENST00000619009 ABCC9O60706 1549 aa16.23■□□□□ 0.19
BARD1-213ENST00000619009 PCGF6Q9BYE7 350 aa16.11■□□□□ 0.17
BARD1-213ENST00000619009 MYO15BQ96JP2 1530 aa16.03■□□□□ 0.16
BARD1-213ENST00000619009 CCDC180Q9P1Z9 1646 aa15.83■□□□□ 0.12
BARD1-213ENST00000619009 PABPN1Q86U42 306 aaKnown RBP eCLIP15.79■□□□□ 0.12
BARD1-213ENST00000619009 EHMT2Q96KQ7 1210 aa15.78■□□□□ 0.12
BARD1-213ENST00000619009 ZCCHC6Q5VYS8 1495 aaKnown RBP15.77■□□□□ 0.11
BARD1-213ENST00000619009 CHIC1Q5VXU3 224 aa15.74■□□□□ 0.11
BARD1-213ENST00000619009 SCAF1Q9H7N4 1312 aaKnown RBP15.68■□□□□ 0.1
BARD1-213ENST00000619009 LOC105371045A0A1W2PR82 267 aa15.6■□□□□ 0.09
BARD1-213ENST00000619009 FAM9AQ8IZU1 332 aaPredicted RBP15.53■□□□□ 0.08
BARD1-213ENST00000619009 SCRIBQ14160 1630 aa15.52■□□□□ 0.08
BARD1-213ENST00000619009 PELP1Q8IZL8 1130 aaKnown RBP15.51■□□□□ 0.07
BARD1-213ENST00000619009 DCAF1Q9Y4B6 1507 aa15.32■□□□□ 0.04
BARD1-213ENST00000619009 TRIM26Q12899 539 aaPredicted RBP15.31■□□□□ 0.04
BARD1-213ENST00000619009 TRIM41Q8WV44 630 aa15.26■□□□□ 0.03
BARD1-213ENST00000619009 NEUROD1Q13562 356 aa15.2■□□□□ 0.02
BARD1-213ENST00000619009 RANGAP1P46060 587 aaPredicted RBP15.12■□□□□ 0.01
BARD1-213ENST00000619009 RB1CC1Q8TDY2 1594 aa15.12■□□□□ 0.01
BARD1-213ENST00000619009 ZEB1P37275 1124 aaPredicted RBP15.09■□□□□ 0.01
BARD1-213ENST00000619009 CECR2Q9BXF3 1484 aa15.09■□□□□ 0.01
BARD1-213ENST00000619009 NACADO15069 1562 aa15.09■□□□□ 0.01
BARD1-213ENST00000619009 ACIN1Q9UKV3 1341 aaKnown RBP15.07■□□□□ 0
BARD1-213ENST00000619009 GTF3C3Q9Y5Q9 886 aa15.07■□□□□ 0
BARD1-213ENST00000619009 TTBK1Q5TCY1 1321 aaPredicted RBP15.06■□□□□ 0
BARD1-213ENST00000619009 RSF1Q96T23 1441 aaPredicted RBP15□□□□□ -0.01
BARD1-213ENST00000619009 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.92□□□□□ -0.02
BARD1-213ENST00000619009 UBTFP17480 764 aaKnown RBP14.84□□□□□ -0.03
BARD1-213ENST00000619009 MROH2BQ7Z745 1585 aa14.84□□□□□ -0.03
BARD1-213ENST00000619009 CCER1Q8TC90 406 aaPredicted RBP14.8□□□□□ -0.04
BARD1-213ENST00000619009 DIEXFQ68CQ4 756 aaKnown RBP14.78□□□□□ -0.04
BARD1-213ENST00000619009 MYT1Q01538 1121 aa14.76□□□□□ -0.05
BARD1-213ENST00000619009 CENPBP07199 599 aaPredicted RBP14.75□□□□□ -0.05
BARD1-213ENST00000619009 YTHDC1Q96MU7 727 aaKnown RBP14.75□□□□□ -0.05
BARD1-213ENST00000619009 WIZO95785 1651 aa14.66□□□□□ -0.06
BARD1-213ENST00000619009 ATP1B4Q9UN42 357 aaPredicted RBP14.62□□□□□ -0.07
BARD1-213ENST00000619009 BAZ1AQ9NRL2 1556 aaPredicted RBP14.62□□□□□ -0.07
BARD1-213ENST00000619009 BAZ1BQ9UIG0 1483 aaKnown RBP14.55□□□□□ -0.08
BARD1-213ENST00000619009 MIER1Q8N108 512 aa14.51□□□□□ -0.09
BARD1-213ENST00000619009 APLP2Q06481 763 aa14.5□□□□□ -0.09
BARD1-213ENST00000619009 CCDC88BA6NC98 1476 aa14.5□□□□□ -0.09
BARD1-213ENST00000619009 DNAJC5BQ9UF47 199 aa14.47□□□□□ -0.09
BARD1-213ENST00000619009 CSRNP3Q8WYN3 585 aa14.44□□□□□ -0.1
BARD1-213ENST00000619009 SMARCA4P51532 1647 aa14.43□□□□□ -0.1
BARD1-213ENST00000619009 BICRAQ9NZM4 1560 aa14.43□□□□□ -0.1
BARD1-213ENST00000619009 ABCC8Q09428 1581 aa14.42□□□□□ -0.1
BARD1-213ENST00000619009 ATAD2BQ9ULI0 1458 aa14.41□□□□□ -0.1
BARD1-213ENST00000619009 ZNF316A6NFI3 1004 aaPredicted RBP14.39□□□□□ -0.11
BARD1-213ENST00000619009 P3H3Q8IVL6 736 aa14.38□□□□□ -0.11
BARD1-213ENST00000619009 BCL11AQ9H165 835 aa14.37□□□□□ -0.11
BARD1-213ENST00000619009 UNC13AQ9UPW8 1703 aa14.36□□□□□ -0.11
BARD1-213ENST00000619009 FBLN2P98095 1184 aa14.34□□□□□ -0.11
BARD1-213ENST00000619009 SOGA1O94964 1423 aa14.31□□□□□ -0.12
BARD1-213ENST00000619009 WRNQ14191 1432 aaPredicted RBP eCLIP14.3□□□□□ -0.12
BARD1-213ENST00000619009 TOP2AP11388 1531 aaKnown RBP14.29□□□□□ -0.12
BARD1-213ENST00000619009 ITGAEP38570 1179 aa14.29□□□□□ -0.12
BARD1-213ENST00000619009 SUPT16HQ9Y5B9 1047 aaKnown RBP14.28□□□□□ -0.12
BARD1-213ENST00000619009 ARID3CA6NKF2 412 aa14.27□□□□□ -0.12
BARD1-213ENST00000619009 TSHZ2Q9NRE2 1034 aa14.26□□□□□ -0.13
BARD1-213ENST00000619009 EIF4G1Q04637 1599 aaKnown RBP14.26□□□□□ -0.13
BARD1-213ENST00000619009 SMARCA2P51531 1590 aa14.24□□□□□ -0.13
BARD1-213ENST00000619009 HNRNPUL2Q1KMD3 747 aaKnown RBP14.24□□□□□ -0.13
BARD1-213ENST00000619009 ANP32EQ9BTT0 268 aa14.21□□□□□ -0.13
BARD1-213ENST00000619009 RUSC2Q8N2Y8 1516 aa14.19□□□□□ -0.14
BARD1-213ENST00000619009 BCANQ96GW7 911 aa14.11□□□□□ -0.15
BARD1-213ENST00000619009 KCNH8Q96L42 1107 aa14.11□□□□□ -0.15
BARD1-213ENST00000619009 CADPSQ9ULU8 1353 aa14.1□□□□□ -0.15
BARD1-213ENST00000619009 NESP48681 1621 aa14.1□□□□□ -0.15
BARD1-213ENST00000619009 NCAPD3P42695 1498 aa14.09□□□□□ -0.15
BARD1-213ENST00000619009 CC2D2AQ9P2K1 1620 aa14.09□□□□□ -0.15
BARD1-213ENST00000619009 CEP162Q5TB80 1403 aa14.06□□□□□ -0.16
BARD1-213ENST00000619009 TDRD9Q8NDG6 1382 aaKnown RBP14.05□□□□□ -0.16
BARD1-213ENST00000619009 CUX2O14529 1486 aa14.01□□□□□ -0.17
BARD1-213ENST00000619009 ERCC6Q03468 1493 aa13.99□□□□□ -0.17
BARD1-213ENST00000619009 FAM50AQ14320 339 aaKnown RBP13.98□□□□□ -0.17
BARD1-213ENST00000619009 KIF27Q86VH2 1401 aa13.96□□□□□ -0.17
BARD1-213ENST00000619009 CLIP1P30622 1438 aa13.95□□□□□ -0.18
BARD1-213ENST00000619009 FANCD2Q9BXW9 1451 aa13.95□□□□□ -0.18
BARD1-213ENST00000619009 CHMP7Q8WUX9 453 aaPredicted RBP13.93□□□□□ -0.18
BARD1-213ENST00000619009 RAD54L2Q9Y4B4 1467 aa13.91□□□□□ -0.18
BARD1-213ENST00000619009 MSH5O43196 834 aa13.91□□□□□ -0.18
BARD1-213ENST00000619009 GOLGA3Q08378 1498 aa13.91□□□□□ -0.18
BARD1-213ENST00000619009 SYNJ1O43426 1573 aa13.89□□□□□ -0.19
BARD1-213ENST00000619009 RAPGEF2Q9Y4G8 1499 aa13.89□□□□□ -0.19
BARD1-213ENST00000619009 RBM19Q9Y4C8 960 aaKnown RBP13.89□□□□□ -0.19
BARD1-213ENST00000619009 PDS5BQ9NTI5 1447 aa13.88□□□□□ -0.19
BARD1-213ENST00000619009 CARMIL1Q5VZK9 1371 aa13.88□□□□□ -0.19
BARD1-213ENST00000619009 FKBP8Q14318 412 aa13.88□□□□□ -0.19
BARD1-213ENST00000619009 TNIKQ9UKE5 1360 aa13.87□□□□□ -0.19
BARD1-213ENST00000619009 CFTRP13569 1480 aa13.87□□□□□ -0.19
BARD1-213ENST00000619009 PRKCSHP14314 528 aaPredicted RBP13.86□□□□□ -0.19
BARD1-213ENST00000619009 EEA1Q15075 1411 aa13.86□□□□□ -0.19
BARD1-213ENST00000619009 CEP164Q9UPV0 1460 aa13.85□□□□□ -0.19
BARD1-213ENST00000619009 HMGXB3Q12766 1538 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms