RNA–Protein interactions for RNA: ENST00000504610.2

AP002884.3-201, humanhuman

TSL 2 BASIC

Gene AP002884.3, Length 2,749 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002884.3-201ENST00000504610 NISCHQ9Y2I1 1504 aa20.63■□□□□ 0.89
AP002884.3-201ENST00000504610 DCAF8L2P0C7V8 631 aa17.83■□□□□ 0.44
AP002884.3-201ENST00000504610 CCDC180Q9P1Z9 1646 aa17.75■□□□□ 0.43
AP002884.3-201ENST00000504610 ABCC9O60706 1549 aa17.62■□□□□ 0.41
AP002884.3-201ENST00000504610 SHROOM4Q9ULL8 1493 aa17.43■□□□□ 0.38
AP002884.3-201ENST00000504610 ZCCHC6Q5VYS8 1495 aaKnown RBP17.25■□□□□ 0.35
AP002884.3-201ENST00000504610 SCRIBQ14160 1630 aa16.85■□□□□ 0.29
AP002884.3-201ENST00000504610 PABPN1Q86U42 306 aaKnown RBP eCLIP16.78■□□□□ 0.28
AP002884.3-201ENST00000504610 DCAF1Q9Y4B6 1507 aa16.69■□□□□ 0.26
AP002884.3-201ENST00000504610 NACADO15069 1562 aa16.65■□□□□ 0.26
AP002884.3-201ENST00000504610 RB1CC1Q8TDY2 1594 aa16.64■□□□□ 0.25
AP002884.3-201ENST00000504610 SUPT5HO00267 1087 aaKnown RBP16.63■□□□□ 0.25
AP002884.3-201ENST00000504610 UNC13AQ9UPW8 1703 aa16.48■□□□□ 0.23
AP002884.3-201ENST00000504610 MYO15BQ96JP2 1530 aa16.47■□□□□ 0.23
AP002884.3-201ENST00000504610 CECR2Q9BXF3 1484 aa16.35■□□□□ 0.21
AP002884.3-201ENST00000504610 BICRAQ9NZM4 1560 aa16.31■□□□□ 0.2
AP002884.3-201ENST00000504610 MROH2BQ7Z745 1585 aa16.13■□□□□ 0.17
AP002884.3-201ENST00000504610 RSF1Q96T23 1441 aaPredicted RBP16.08■□□□□ 0.16
AP002884.3-201ENST00000504610 WIZO95785 1651 aa16.01■□□□□ 0.15
AP002884.3-201ENST00000504610 DNAJC5BQ9UF47 199 aa15.96■□□□□ 0.15
AP002884.3-201ENST00000504610 SMARCA4P51532 1647 aa15.89■□□□□ 0.13
AP002884.3-201ENST00000504610 BAZ1AQ9NRL2 1556 aaPredicted RBP15.86■□□□□ 0.13
AP002884.3-201ENST00000504610 EIF4G1Q04637 1599 aaKnown RBP15.84■□□□□ 0.13
AP002884.3-201ENST00000504610 ATAD2BQ9ULI0 1458 aa15.73■□□□□ 0.11
AP002884.3-201ENST00000504610 CC2D2AQ9P2K1 1620 aa15.71■□□□□ 0.11
AP002884.3-201ENST00000504610 PELP1Q8IZL8 1130 aaKnown RBP15.7■□□□□ 0.1
AP002884.3-201ENST00000504610 BAZ1BQ9UIG0 1483 aaKnown RBP15.65■□□□□ 0.1
AP002884.3-201ENST00000504610 CCDC88BA6NC98 1476 aa15.61■□□□□ 0.09
AP002884.3-201ENST00000504610 EHMT2Q96KQ7 1210 aa15.59■□□□□ 0.09
AP002884.3-201ENST00000504610 TOP2AP11388 1531 aaKnown RBP15.57■□□□□ 0.08
AP002884.3-201ENST00000504610 CHIC1Q5VXU3 224 aa15.56■□□□□ 0.08
AP002884.3-201ENST00000504610 HRCP23327 699 aa15.55■□□□□ 0.08
AP002884.3-201ENST00000504610 SMARCA2P51531 1590 aa15.53■□□□□ 0.08
AP002884.3-201ENST00000504610 FAM9AQ8IZU1 332 aaPredicted RBP15.49■□□□□ 0.07
AP002884.3-201ENST00000504610 NCAPD3P42695 1498 aa15.48■□□□□ 0.07
AP002884.3-201ENST00000504610 PEG3Q9GZU2 1588 aa15.48■□□□□ 0.07
AP002884.3-201ENST00000504610 NESP48681 1621 aa15.44■□□□□ 0.06
AP002884.3-201ENST00000504610 ABCC8Q09428 1581 aa15.43■□□□□ 0.06
AP002884.3-201ENST00000504610 TRIM41Q8WV44 630 aa15.37■□□□□ 0.05
AP002884.3-201ENST00000504610 HMGXB3Q12766 1538 aa15.35■□□□□ 0.05
AP002884.3-201ENST00000504610 MYT1Q01538 1121 aa15.31■□□□□ 0.04
AP002884.3-201ENST00000504610 LOC105371045A0A1W2PR82 267 aa15.27■□□□□ 0.04
AP002884.3-201ENST00000504610 CADPSQ9ULU8 1353 aa15.21■□□□□ 0.02
AP002884.3-201ENST00000504610 CFTRP13569 1480 aa15.16■□□□□ 0.02
AP002884.3-201ENST00000504610 RUSC2Q8N2Y8 1516 aa15.12■□□□□ 0.01
AP002884.3-201ENST00000504610 WRNQ14191 1432 aaPredicted RBP eCLIP15.12■□□□□ 0.01
AP002884.3-201ENST00000504610 SYNJ1O43426 1573 aa15.12■□□□□ 0.01
AP002884.3-201ENST00000504610 SOGA1O94964 1423 aa15.1■□□□□ 0.01
AP002884.3-201ENST00000504610 FANCD2Q9BXW9 1451 aa15.09■□□□□ 0.01
AP002884.3-201ENST00000504610 RANGAP1P46060 587 aaPredicted RBP15.08■□□□□ 0
AP002884.3-201ENST00000504610 CUX1P39880 1505 aa15.04■□□□□ -0
AP002884.3-201ENST00000504610 KIF21AQ7Z4S6 1674 aa15.03■□□□□ -0
AP002884.3-201ENST00000504610 ERCC6Q03468 1493 aa14.99□□□□□ -0.01
AP002884.3-201ENST00000504610 RAD54L2Q9Y4B4 1467 aa14.98□□□□□ -0.01
AP002884.3-201ENST00000504610 PCGF6Q9BYE7 350 aa14.96□□□□□ -0.01
AP002884.3-201ENST00000504610 CEP164Q9UPV0 1460 aa14.96□□□□□ -0.02
AP002884.3-201ENST00000504610 URB2Q14146 1524 aaKnown RBP14.95□□□□□ -0.02
AP002884.3-201ENST00000504610 LAMC3Q9Y6N6 1575 aa14.93□□□□□ -0.02
AP002884.3-201ENST00000504610 PDS5BQ9NTI5 1447 aa14.92□□□□□ -0.02
AP002884.3-201ENST00000504610 FGD5Q6ZNL6 1462 aa14.91□□□□□ -0.02
AP002884.3-201ENST00000504610 TDRD9Q8NDG6 1382 aaKnown RBP14.9□□□□□ -0.02
AP002884.3-201ENST00000504610 TRIM26Q12899 539 aaPredicted RBP14.9□□□□□ -0.02
AP002884.3-201ENST00000504610 TOPBP1Q92547 1522 aa14.88□□□□□ -0.03
AP002884.3-201ENST00000504610 TOP2BQ02880 1626 aa14.86□□□□□ -0.03
AP002884.3-201ENST00000504610 POLA1P09884 1462 aaPredicted RBP14.85□□□□□ -0.03
AP002884.3-201ENST00000504610 PRDM2Q13029 1718 aa14.85□□□□□ -0.03
AP002884.3-201ENST00000504610 UBTFP17480 764 aaKnown RBP14.83□□□□□ -0.04
AP002884.3-201ENST00000504610 CUX2O14529 1486 aa14.83□□□□□ -0.04
AP002884.3-201ENST00000504610 PPARGC1BQ86YN6 1023 aaKnown RBP14.83□□□□□ -0.04
AP002884.3-201ENST00000504610 CSRNP3Q8WYN3 585 aa14.82□□□□□ -0.04
AP002884.3-201ENST00000504610 TTBK1Q5TCY1 1321 aaPredicted RBP14.8□□□□□ -0.04
AP002884.3-201ENST00000504610 AQRO60306 1485 aaKnown RBP eCLIP14.79□□□□□ -0.04
AP002884.3-201ENST00000504610 ZNF608Q9ULD9 1512 aaPredicted RBP14.78□□□□□ -0.04
AP002884.3-201ENST00000504610 BIVM-ERCC5R4GMW8 1640 aa14.78□□□□□ -0.04
AP002884.3-201ENST00000504610 ZEB1P37275 1124 aaPredicted RBP14.77□□□□□ -0.04
AP002884.3-201ENST00000504610 DNMBPQ6XZF7 1577 aa14.76□□□□□ -0.05
AP002884.3-201ENST00000504610 MRC2Q9UBG0 1479 aa14.76□□□□□ -0.05
AP002884.3-201ENST00000504610 FBLN2P98095 1184 aa14.75□□□□□ -0.05
AP002884.3-201ENST00000504610 RAPGEF2Q9Y4G8 1499 aa14.73□□□□□ -0.05
AP002884.3-201ENST00000504610 SCAF1Q9H7N4 1312 aaKnown RBP14.7□□□□□ -0.06
AP002884.3-201ENST00000504610 THOC2Q8NI27 1593 aaKnown RBP14.69□□□□□ -0.06
AP002884.3-201ENST00000504610 KIF27Q86VH2 1401 aa14.68□□□□□ -0.06
AP002884.3-201ENST00000504610 P3H3Q8IVL6 736 aa14.67□□□□□ -0.06
AP002884.3-201ENST00000504610 IGF1RP08069 1367 aa14.67□□□□□ -0.06
AP002884.3-201ENST00000504610 WDR62O43379 1518 aa14.63□□□□□ -0.07
AP002884.3-201ENST00000504610 TARBP1Q13395 1621 aaKnown RBP14.6□□□□□ -0.07
AP002884.3-201ENST00000504610 GAPVD1Q14C86 1478 aa14.6□□□□□ -0.07
AP002884.3-201ENST00000504610 CARMIL1Q5VZK9 1371 aa14.6□□□□□ -0.07
AP002884.3-201ENST00000504610 ABCA10Q8WWZ4 1543 aa14.59□□□□□ -0.07
AP002884.3-201ENST00000504610 ARID3CA6NKF2 412 aa14.55□□□□□ -0.08
AP002884.3-201ENST00000504610 EIF4G3O43432 1585 aaKnown RBP14.52□□□□□ -0.08
AP002884.3-201ENST00000504610 CEP162Q5TB80 1403 aa14.52□□□□□ -0.09
AP002884.3-201ENST00000504610 GOLGA3Q08378 1498 aa14.52□□□□□ -0.09
AP002884.3-201ENST00000504610 PRXQ9BXM0 1461 aa14.52□□□□□ -0.09
AP002884.3-201ENST00000504610 WDR97A6NE52 1622 aa14.51□□□□□ -0.09
AP002884.3-201ENST00000504610 SNAPC4Q5SXM2 1469 aa14.5□□□□□ -0.09
AP002884.3-201ENST00000504610 IFT140Q96RY7 1462 aa14.5□□□□□ -0.09
AP002884.3-201ENST00000504610 CHMP7Q8WUX9 453 aaPredicted RBP14.5□□□□□ -0.09
AP002884.3-201ENST00000504610 ATP1B4Q9UN42 357 aaPredicted RBP14.5□□□□□ -0.09
AP002884.3-201ENST00000504610 EEA1Q15075 1411 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms