RNA–Protein interactions for RNA: ENST00000327968.6

DDX53-201, Transcript of DEAD-box helicase 53, humanhuman

APPRIS P1 BASIC

Gene DDX53, Length 3,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53-201ENST00000327968 NISCHQ9Y2I1 1504 aa19.53■□□□□ 0.72
DDX53-201ENST00000327968 CCDC180Q9P1Z9 1646 aa17.26■□□□□ 0.35
DDX53-201ENST00000327968 ZCCHC6Q5VYS8 1495 aaKnown RBP16.45■□□□□ 0.22
DDX53-201ENST00000327968 DCAF1Q9Y4B6 1507 aa16.37■□□□□ 0.21
DDX53-201ENST00000327968 SHROOM4Q9ULL8 1493 aa16.34■□□□□ 0.21
DDX53-201ENST00000327968 SUPT5HO00267 1087 aaKnown RBP16.32■□□□□ 0.2
DDX53-201ENST00000327968 MYO15BQ96JP2 1530 aa16.22■□□□□ 0.19
DDX53-201ENST00000327968 PCGF6Q9BYE7 350 aa16.05■□□□□ 0.16
DDX53-201ENST00000327968 PPARGC1BQ86YN6 1023 aaKnown RBP16.04■□□□□ 0.16
DDX53-201ENST00000327968 NACADO15069 1562 aa15.98■□□□□ 0.15
DDX53-201ENST00000327968 HRCP23327 699 aa15.92■□□□□ 0.14
DDX53-201ENST00000327968 ABCC9O60706 1549 aa15.87■□□□□ 0.13
DDX53-201ENST00000327968 RB1CC1Q8TDY2 1594 aa15.79■□□□□ 0.12
DDX53-201ENST00000327968 DCAF8L2P0C7V8 631 aa15.77■□□□□ 0.11
DDX53-201ENST00000327968 EHMT2Q96KQ7 1210 aa15.55■□□□□ 0.08
DDX53-201ENST00000327968 LOC105371045A0A1W2PR82 267 aa15.54■□□□□ 0.08
DDX53-201ENST00000327968 CHIC1Q5VXU3 224 aa15.54■□□□□ 0.08
DDX53-201ENST00000327968 SCRIBQ14160 1630 aa15.53■□□□□ 0.08
DDX53-201ENST00000327968 UNC13AQ9UPW8 1703 aa15.48■□□□□ 0.07
DDX53-201ENST00000327968 BICRAQ9NZM4 1560 aa15.29■□□□□ 0.04
DDX53-201ENST00000327968 FAM9AQ8IZU1 332 aaPredicted RBP15.26■□□□□ 0.03
DDX53-201ENST00000327968 SCAF1Q9H7N4 1312 aaKnown RBP15.18■□□□□ 0.02
DDX53-201ENST00000327968 TRIM26Q12899 539 aaPredicted RBP15.15■□□□□ 0.02
DDX53-201ENST00000327968 BAZ1AQ9NRL2 1556 aaPredicted RBP15.11■□□□□ 0.01
DDX53-201ENST00000327968 PELP1Q8IZL8 1130 aaKnown RBP15.11■□□□□ 0.01
DDX53-201ENST00000327968 TTBK1Q5TCY1 1321 aaPredicted RBP15.08■□□□□ 0
DDX53-201ENST00000327968 RSF1Q96T23 1441 aaPredicted RBP15.05■□□□□ -0
DDX53-201ENST00000327968 SMARCA4P51532 1647 aa15.04■□□□□ -0
DDX53-201ENST00000327968 CECR2Q9BXF3 1484 aa15□□□□□ -0.01
DDX53-201ENST00000327968 PEG3Q9GZU2 1588 aa15□□□□□ -0.01
DDX53-201ENST00000327968 MROH2BQ7Z745 1585 aa14.99□□□□□ -0.01
DDX53-201ENST00000327968 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.9□□□□□ -0.02
DDX53-201ENST00000327968 ZEB1P37275 1124 aaPredicted RBP14.89□□□□□ -0.03
DDX53-201ENST00000327968 YTHDC1Q96MU7 727 aaKnown RBP14.88□□□□□ -0.03
DDX53-201ENST00000327968 WIZO95785 1651 aa14.87□□□□□ -0.03
DDX53-201ENST00000327968 NEUROD1Q13562 356 aa14.85□□□□□ -0.03
DDX53-201ENST00000327968 GTF3C3Q9Y5Q9 886 aa14.85□□□□□ -0.03
DDX53-201ENST00000327968 TOP2AP11388 1531 aaKnown RBP14.85□□□□□ -0.03
DDX53-201ENST00000327968 CCER1Q8TC90 406 aaPredicted RBP14.84□□□□□ -0.03
DDX53-201ENST00000327968 TRIM41Q8WV44 630 aa14.84□□□□□ -0.03
DDX53-201ENST00000327968 SMARCA2P51531 1590 aa14.82□□□□□ -0.04
DDX53-201ENST00000327968 PABPN1Q86U42 306 aaKnown RBP eCLIP14.81□□□□□ -0.04
DDX53-201ENST00000327968 EIF4G1Q04637 1599 aaKnown RBP14.78□□□□□ -0.04
DDX53-201ENST00000327968 ACIN1Q9UKV3 1341 aaKnown RBP14.75□□□□□ -0.05
DDX53-201ENST00000327968 HMGXB3Q12766 1538 aa14.74□□□□□ -0.05
DDX53-201ENST00000327968 ATAD2BQ9ULI0 1458 aa14.73□□□□□ -0.05
DDX53-201ENST00000327968 CENPBP07199 599 aaPredicted RBP14.68□□□□□ -0.06
DDX53-201ENST00000327968 NCAPD3P42695 1498 aa14.68□□□□□ -0.06
DDX53-201ENST00000327968 DIEXFQ68CQ4 756 aaKnown RBP14.67□□□□□ -0.06
DDX53-201ENST00000327968 BAZ1BQ9UIG0 1483 aaKnown RBP14.61□□□□□ -0.07
DDX53-201ENST00000327968 CCDC88BA6NC98 1476 aa14.56□□□□□ -0.08
DDX53-201ENST00000327968 CC2D2AQ9P2K1 1620 aa14.54□□□□□ -0.08
DDX53-201ENST00000327968 PRDM2Q13029 1718 aa14.45□□□□□ -0.1
DDX53-201ENST00000327968 RANGAP1P46060 587 aaPredicted RBP14.4□□□□□ -0.1
DDX53-201ENST00000327968 MYT1Q01538 1121 aa14.39□□□□□ -0.11
DDX53-201ENST00000327968 HNRNPUL2Q1KMD3 747 aaKnown RBP14.36□□□□□ -0.11
DDX53-201ENST00000327968 CFTRP13569 1480 aa14.32□□□□□ -0.12
DDX53-201ENST00000327968 MIER1Q8N108 512 aa14.32□□□□□ -0.12
DDX53-201ENST00000327968 ZNF316A6NFI3 1004 aaPredicted RBP14.27□□□□□ -0.13
DDX53-201ENST00000327968 UBTFP17480 764 aaKnown RBP14.26□□□□□ -0.13
DDX53-201ENST00000327968 BIVM-ERCC5R4GMW8 1640 aa14.23□□□□□ -0.13
DDX53-201ENST00000327968 LAMC3Q9Y6N6 1575 aa14.23□□□□□ -0.13
DDX53-201ENST00000327968 CADPSQ9ULU8 1353 aa14.2□□□□□ -0.14
DDX53-201ENST00000327968 BCANQ96GW7 911 aa14.19□□□□□ -0.14
DDX53-201ENST00000327968 TOP2BQ02880 1626 aa14.18□□□□□ -0.14
DDX53-201ENST00000327968 ABCC8Q09428 1581 aa14.16□□□□□ -0.14
DDX53-201ENST00000327968 WRNQ14191 1432 aaPredicted RBP eCLIP14.15□□□□□ -0.14
DDX53-201ENST00000327968 SYNJ1O43426 1573 aa14.13□□□□□ -0.15
DDX53-201ENST00000327968 EEA1Q15075 1411 aa14.1□□□□□ -0.15
DDX53-201ENST00000327968 CUX1P39880 1505 aa14.05□□□□□ -0.16
DDX53-201ENST00000327968 FANCD2Q9BXW9 1451 aa14.03□□□□□ -0.16
DDX53-201ENST00000327968 DNMBPQ6XZF7 1577 aa14.03□□□□□ -0.16
DDX53-201ENST00000327968 APLP2Q06481 763 aa14.01□□□□□ -0.17
DDX53-201ENST00000327968 PDS5BQ9NTI5 1447 aa13.99□□□□□ -0.17
DDX53-201ENST00000327968 ITGAEP38570 1179 aa13.99□□□□□ -0.17
DDX53-201ENST00000327968 CEP164Q9UPV0 1460 aa13.97□□□□□ -0.17
DDX53-201ENST00000327968 SUPT16HQ9Y5B9 1047 aaKnown RBP13.96□□□□□ -0.17
DDX53-201ENST00000327968 KIF21AQ7Z4S6 1674 aa13.96□□□□□ -0.18
DDX53-201ENST00000327968 NESP48681 1621 aa13.95□□□□□ -0.18
DDX53-201ENST00000327968 KIF21BO75037 1637 aa13.94□□□□□ -0.18
DDX53-201ENST00000327968 WDR97A6NE52 1622 aa13.92□□□□□ -0.18
DDX53-201ENST00000327968 TOPBP1Q92547 1522 aa13.91□□□□□ -0.18
DDX53-201ENST00000327968 BCL11AQ9H165 835 aa13.91□□□□□ -0.18
DDX53-201ENST00000327968 DNAJC5BQ9UF47 199 aa13.89□□□□□ -0.19
DDX53-201ENST00000327968 KCNH8Q96L42 1107 aa13.88□□□□□ -0.19
DDX53-201ENST00000327968 TSHZ2Q9NRE2 1034 aa13.88□□□□□ -0.19
DDX53-201ENST00000327968 URB2Q14146 1524 aaKnown RBP13.87□□□□□ -0.19
DDX53-201ENST00000327968 CEP162Q5TB80 1403 aa13.87□□□□□ -0.19
DDX53-201ENST00000327968 CSRNP3Q8WYN3 585 aa13.87□□□□□ -0.19
DDX53-201ENST00000327968 FGD5Q6ZNL6 1462 aa13.86□□□□□ -0.19
DDX53-201ENST00000327968 SOGA1O94964 1423 aa13.86□□□□□ -0.19
DDX53-201ENST00000327968 WDR62O43379 1518 aa13.86□□□□□ -0.19
DDX53-201ENST00000327968 ANP32EQ9BTT0 268 aa13.86□□□□□ -0.19
DDX53-201ENST00000327968 MRC2Q9UBG0 1479 aa13.85□□□□□ -0.19
DDX53-201ENST00000327968 ERICH3Q5RHP9 1530 aa13.85□□□□□ -0.19
DDX53-201ENST00000327968 ABCA10Q8WWZ4 1543 aa13.85□□□□□ -0.19
DDX53-201ENST00000327968 FKBP8Q14318 412 aa13.84□□□□□ -0.19
DDX53-201ENST00000327968 POLA1P09884 1462 aaPredicted RBP13.82□□□□□ -0.2
DDX53-201ENST00000327968 KIF27Q86VH2 1401 aa13.81□□□□□ -0.2
DDX53-201ENST00000327968 THOC2Q8NI27 1593 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms