RNA–Protein interactions for RNA: ENST00000610540.4

CAB39L-212, Transcript of calcium binding protein 39 like, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAB39L, Length 3,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39L-212ENST00000610540 NISCHQ9Y2I1 1504 aa22.22■■□□□ 1.15
CAB39L-212ENST00000610540 CCDC180Q9P1Z9 1646 aa19.44■□□□□ 0.7
CAB39L-212ENST00000610540 ZCCHC6Q5VYS8 1495 aaKnown RBP18.88■□□□□ 0.61
CAB39L-212ENST00000610540 DCAF1Q9Y4B6 1507 aa18.65■□□□□ 0.58
CAB39L-212ENST00000610540 MYO15BQ96JP2 1530 aa18.29■□□□□ 0.52
CAB39L-212ENST00000610540 ABCC9O60706 1549 aa17.8■□□□□ 0.44
CAB39L-212ENST00000610540 NACADO15069 1562 aa17.76■□□□□ 0.43
CAB39L-212ENST00000610540 SHROOM4Q9ULL8 1493 aa17.7■□□□□ 0.42
CAB39L-212ENST00000610540 SCRIBQ14160 1630 aa17.5■□□□□ 0.39
CAB39L-212ENST00000610540 UNC13AQ9UPW8 1703 aa17.49■□□□□ 0.39
CAB39L-212ENST00000610540 RB1CC1Q8TDY2 1594 aa17.38■□□□□ 0.37
CAB39L-212ENST00000610540 RSF1Q96T23 1441 aaPredicted RBP17.32■□□□□ 0.36
CAB39L-212ENST00000610540 EIF4G1Q04637 1599 aaKnown RBP17.25■□□□□ 0.35
CAB39L-212ENST00000610540 BAZ1AQ9NRL2 1556 aaPredicted RBP17.16■□□□□ 0.34
CAB39L-212ENST00000610540 BICRAQ9NZM4 1560 aa17.16■□□□□ 0.34
CAB39L-212ENST00000610540 MROH2BQ7Z745 1585 aa17.14■□□□□ 0.33
CAB39L-212ENST00000610540 CECR2Q9BXF3 1484 aa17.1■□□□□ 0.33
CAB39L-212ENST00000610540 SUPT5HO00267 1087 aaKnown RBP17.08■□□□□ 0.33
CAB39L-212ENST00000610540 PEG3Q9GZU2 1588 aa17.07■□□□□ 0.32
CAB39L-212ENST00000610540 WIZO95785 1651 aa17.06■□□□□ 0.32
CAB39L-212ENST00000610540 SMARCA4P51532 1647 aa17.04■□□□□ 0.32
CAB39L-212ENST00000610540 CHIC1Q5VXU3 224 aa17.04■□□□□ 0.32
CAB39L-212ENST00000610540 DCAF8L2P0C7V8 631 aa17.01■□□□□ 0.31
CAB39L-212ENST00000610540 TOP2AP11388 1531 aaKnown RBP16.93■□□□□ 0.3
CAB39L-212ENST00000610540 SMARCA2P51531 1590 aa16.83■□□□□ 0.28
CAB39L-212ENST00000610540 CCDC88BA6NC98 1476 aa16.63■□□□□ 0.25
CAB39L-212ENST00000610540 ATAD2BQ9ULI0 1458 aa16.51■□□□□ 0.23
CAB39L-212ENST00000610540 HMGXB3Q12766 1538 aa16.5■□□□□ 0.23
CAB39L-212ENST00000610540 PRDM2Q13029 1718 aa16.43■□□□□ 0.22
CAB39L-212ENST00000610540 ABCC8Q09428 1581 aa16.37■□□□□ 0.21
CAB39L-212ENST00000610540 BIVM-ERCC5R4GMW8 1640 aa16.37■□□□□ 0.21
CAB39L-212ENST00000610540 NCAPD3P42695 1498 aa16.35■□□□□ 0.21
CAB39L-212ENST00000610540 SYNJ1O43426 1573 aa16.31■□□□□ 0.2
CAB39L-212ENST00000610540 BAZ1BQ9UIG0 1483 aaKnown RBP16.26■□□□□ 0.19
CAB39L-212ENST00000610540 TOP2BQ02880 1626 aa16.26■□□□□ 0.19
CAB39L-212ENST00000610540 KIF21BO75037 1637 aa16.22■□□□□ 0.19
CAB39L-212ENST00000610540 EEA1Q15075 1411 aa16.2■□□□□ 0.18
CAB39L-212ENST00000610540 LOC105371045A0A1W2PR82 267 aa16.19■□□□□ 0.18
CAB39L-212ENST00000610540 WRNQ14191 1432 aaPredicted RBP eCLIP16.15■□□□□ 0.18
CAB39L-212ENST00000610540 TRIM41Q8WV44 630 aa16.15■□□□□ 0.18
CAB39L-212ENST00000610540 PABPN1Q86U42 306 aaKnown RBP eCLIP16.14■□□□□ 0.17
CAB39L-212ENST00000610540 CFTRP13569 1480 aa16.11■□□□□ 0.17
CAB39L-212ENST00000610540 SOGA1O94964 1423 aa16.08■□□□□ 0.16
CAB39L-212ENST00000610540 RUSC2Q8N2Y8 1516 aa16.07■□□□□ 0.16
CAB39L-212ENST00000610540 CUX1P39880 1505 aa16.03■□□□□ 0.16
CAB39L-212ENST00000610540 TNIKQ9UKE5 1360 aa16■□□□□ 0.15
CAB39L-212ENST00000610540 ERICH3Q5RHP9 1530 aa15.99■□□□□ 0.15
CAB39L-212ENST00000610540 CC2D2AQ9P2K1 1620 aa15.98■□□□□ 0.15
CAB39L-212ENST00000610540 HRCP23327 699 aa15.97■□□□□ 0.15
CAB39L-212ENST00000610540 GOLGA3Q08378 1498 aa15.92■□□□□ 0.14
CAB39L-212ENST00000610540 PRXQ9BXM0 1461 aa15.92■□□□□ 0.14
CAB39L-212ENST00000610540 WDR97A6NE52 1622 aa15.91■□□□□ 0.14
CAB39L-212ENST00000610540 CEP164Q9UPV0 1460 aa15.89■□□□□ 0.14
CAB39L-212ENST00000610540 CEP162Q5TB80 1403 aa15.87■□□□□ 0.13
CAB39L-212ENST00000610540 TRIM26Q12899 539 aaPredicted RBP15.86■□□□□ 0.13
CAB39L-212ENST00000610540 RAPGEF2Q9Y4G8 1499 aa15.78■□□□□ 0.12
CAB39L-212ENST00000610540 CSRNP3Q8WYN3 585 aa15.75■□□□□ 0.11
CAB39L-212ENST00000610540 CADPSQ9ULU8 1353 aa15.75■□□□□ 0.11
CAB39L-212ENST00000610540 LAMC3Q9Y6N6 1575 aa15.74■□□□□ 0.11
CAB39L-212ENST00000610540 PCGF6Q9BYE7 350 aa15.74■□□□□ 0.11
CAB39L-212ENST00000610540 DNMBPQ6XZF7 1577 aa15.73■□□□□ 0.11
CAB39L-212ENST00000610540 ARAP1Q96P48 1450 aa15.68■□□□□ 0.1
CAB39L-212ENST00000610540 ABCA5Q8WWZ7 1642 aa15.66■□□□□ 0.1
CAB39L-212ENST00000610540 ABCA10Q8WWZ4 1543 aa15.64■□□□□ 0.09
CAB39L-212ENST00000610540 VPS8Q8N3P4 1428 aa15.64■□□□□ 0.09
CAB39L-212ENST00000610540 FAM9AQ8IZU1 332 aaPredicted RBP15.63■□□□□ 0.09
CAB39L-212ENST00000610540 FGD5Q6ZNL6 1462 aa15.61■□□□□ 0.09
CAB39L-212ENST00000610540 CUL7Q14999 1698 aa15.61■□□□□ 0.09
CAB39L-212ENST00000610540 CLIP1P30622 1438 aa15.6■□□□□ 0.09
CAB39L-212ENST00000610540 FANCD2Q9BXW9 1451 aa15.59■□□□□ 0.09
CAB39L-212ENST00000610540 MAP3K1Q13233 1512 aa15.59■□□□□ 0.09
CAB39L-212ENST00000610540 TOPBP1Q92547 1522 aa15.59■□□□□ 0.09
CAB39L-212ENST00000610540 KIF27Q86VH2 1401 aa15.58■□□□□ 0.09
CAB39L-212ENST00000610540 KIF21AQ7Z4S6 1674 aa15.58■□□□□ 0.08
CAB39L-212ENST00000610540 TARBP1Q13395 1621 aaKnown RBP15.57■□□□□ 0.08
CAB39L-212ENST00000610540 CTTNBP2Q8WZ74 1663 aa15.57■□□□□ 0.08
CAB39L-212ENST00000610540 CFAP43Q8NDM7 1665 aa15.55■□□□□ 0.08
CAB39L-212ENST00000610540 URB2Q14146 1524 aaKnown RBP15.54■□□□□ 0.08
CAB39L-212ENST00000610540 IGF1RP08069 1367 aa15.53■□□□□ 0.08
CAB39L-212ENST00000610540 POLA1P09884 1462 aaPredicted RBP15.53■□□□□ 0.08
CAB39L-212ENST00000610540 ARHGAP35Q9NRY4 1499 aa15.53■□□□□ 0.08
CAB39L-212ENST00000610540 CUX2O14529 1486 aa15.49■□□□□ 0.07
CAB39L-212ENST00000610540 SAMD9Q5K651 1589 aa15.49■□□□□ 0.07
CAB39L-212ENST00000610540 NESP48681 1621 aa15.49■□□□□ 0.07
CAB39L-212ENST00000610540 LRRIQ1Q96JM4 1722 aa15.46■□□□□ 0.07
CAB39L-212ENST00000610540 PBRM1Q86U86 1689 aa15.43■□□□□ 0.06
CAB39L-212ENST00000610540 EFCAB5A4FU69 1503 aa15.42■□□□□ 0.06
CAB39L-212ENST00000610540 RRBP1Q9P2E9 1410 aaKnown RBP15.41■□□□□ 0.06
CAB39L-212ENST00000610540 TIAM1Q13009 1591 aa15.4■□□□□ 0.06
CAB39L-212ENST00000610540 AQRO60306 1485 aaKnown RBP eCLIP15.39■□□□□ 0.05
CAB39L-212ENST00000610540 WDR62O43379 1518 aa15.36■□□□□ 0.05
CAB39L-212ENST00000610540 ZEB1P37275 1124 aaPredicted RBP15.36■□□□□ 0.05
CAB39L-212ENST00000610540 PPARGC1BQ86YN6 1023 aaKnown RBP15.36■□□□□ 0.05
CAB39L-212ENST00000610540 RAD54L2Q9Y4B4 1467 aa15.35■□□□□ 0.05
CAB39L-212ENST00000610540 PCF11O94913 1555 aaKnown RBP15.33■□□□□ 0.05
CAB39L-212ENST00000610540 SNAPC4Q5SXM2 1469 aa15.32■□□□□ 0.04
CAB39L-212ENST00000610540 THOC2Q8NI27 1593 aaKnown RBP15.32■□□□□ 0.04
CAB39L-212ENST00000610540 ADAMTS12P58397 1594 aa15.31■□□□□ 0.04
CAB39L-212ENST00000610540 CARMIL1Q5VZK9 1371 aa15.29■□□□□ 0.04
CAB39L-212ENST00000610540 PDS5BQ9NTI5 1447 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms