RNA–Protein interactions for RNA: ENST00000493214.2

LINC02006-203, Transcript of long intergenic non-protein coding RNA 2006, humanhuman

TSL 2 BASIC

Gene LINC02006, Length 812 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02006-203ENST00000493214 AEBP2Q6ZN18 517 aaPredicted RBP25.8■■□□□ 1.72
LINC02006-203ENST00000493214 CHIC1Q5VXU3 224 aa24.35■■□□□ 1.49
LINC02006-203ENST00000493214 SENP3Q9H4L4 574 aaPredicted RBP21.85■■□□□ 1.09
LINC02006-203ENST00000493214 PHF23Q9BUL5 403 aaPredicted RBP21.66■■□□□ 1.06
LINC02006-203ENST00000493214 NISCHQ9Y2I1 1504 aa20.84■□□□□ 0.93
LINC02006-203ENST00000493214 FOXD1Q16676 465 aa20.49■□□□□ 0.87
LINC02006-203ENST00000493214 PLPPR3Q6T4P5 718 aa19.39■□□□□ 0.69
LINC02006-203ENST00000493214 PPP6R1Q9UPN7 881 aa19.19■□□□□ 0.66
LINC02006-203ENST00000493214 ADRA2BP18089 450 aa19.11■□□□□ 0.65
LINC02006-203ENST00000493214 PIAS4Q8N2W9 510 aaPredicted RBP19.08■□□□□ 0.64
LINC02006-203ENST00000493214 MSH5O43196 834 aa19.06■□□□□ 0.64
LINC02006-203ENST00000493214 POTEDQ86YR6 584 aa18.8■□□□□ 0.6
LINC02006-203ENST00000493214 CCDC180Q9P1Z9 1646 aa18.46■□□□□ 0.55
LINC02006-203ENST00000493214 ABCC9O60706 1549 aa17.8■□□□□ 0.44
LINC02006-203ENST00000493214 MAPK8IP2Q13387 824 aaPredicted RBP17.61■□□□□ 0.41
LINC02006-203ENST00000493214 DCAF8L2P0C7V8 631 aa17.44■□□□□ 0.38
LINC02006-203ENST00000493214 ZCCHC6Q5VYS8 1495 aaKnown RBP17.39■□□□□ 0.37
LINC02006-203ENST00000493214 DMRT2Q9Y5R5 561 aa17.36■□□□□ 0.37
LINC02006-203ENST00000493214 NACADO15069 1562 aa17.32■□□□□ 0.36
LINC02006-203ENST00000493214 SCAF1Q9H7N4 1312 aaKnown RBP17.3■□□□□ 0.36
LINC02006-203ENST00000493214 RB1CC1Q8TDY2 1594 aa17.3■□□□□ 0.36
LINC02006-203ENST00000493214 MYO15BQ96JP2 1530 aa17.29■□□□□ 0.36
LINC02006-203ENST00000493214 DCAF1Q9Y4B6 1507 aa17.29■□□□□ 0.36
LINC02006-203ENST00000493214 PPP4R3CPQ6ZMV5 832 aa17.05■□□□□ 0.32
LINC02006-203ENST00000493214 SCRIBQ14160 1630 aa16.82■□□□□ 0.28
LINC02006-203ENST00000493214 UNC13AQ9UPW8 1703 aa16.76■□□□□ 0.27
LINC02006-203ENST00000493214 HOXD11P31277 338 aaPredicted RBP16.7■□□□□ 0.26
LINC02006-203ENST00000493214 DCAF8L1A6NGE4 600 aa16.69■□□□□ 0.26
LINC02006-203ENST00000493214 CNKSR2Q8WXI2 1034 aa16.69■□□□□ 0.26
LINC02006-203ENST00000493214 PABPN1Q86U42 306 aaKnown RBP eCLIP16.67■□□□□ 0.26
LINC02006-203ENST00000493214 SHROOM4Q9ULL8 1493 aa16.64■□□□□ 0.25
LINC02006-203ENST00000493214 BICRAQ9NZM4 1560 aa16.62■□□□□ 0.25
LINC02006-203ENST00000493214 RNF216Q9NWF9 866 aaPredicted RBP16.55■□□□□ 0.24
LINC02006-203ENST00000493214 CACNB1Q02641 598 aaPredicted RBP16.46■□□□□ 0.23
LINC02006-203ENST00000493214 RNF39Q9H2S5 420 aa16.33■□□□□ 0.2
LINC02006-203ENST00000493214 NCBP3Q53F19 620 aaKnown RBP16.28■□□□□ 0.2
LINC02006-203ENST00000493214 EIF4G1Q04637 1599 aaKnown RBP16.24■□□□□ 0.19
LINC02006-203ENST00000493214 BAZ1AQ9NRL2 1556 aaPredicted RBP16.19■□□□□ 0.18
LINC02006-203ENST00000493214 NPM3O75607 178 aaKnown RBP16.16■□□□□ 0.18
LINC02006-203ENST00000493214 CECR2Q9BXF3 1484 aa16.14■□□□□ 0.17
LINC02006-203ENST00000493214 SMARCA4P51532 1647 aa16.12■□□□□ 0.17
LINC02006-203ENST00000493214 CC2D2AQ9P2K1 1620 aa16.1■□□□□ 0.17
LINC02006-203ENST00000493214 DNAJC5BQ9UF47 199 aa16.04■□□□□ 0.16
LINC02006-203ENST00000493214 SMARCA2P51531 1590 aa16.04■□□□□ 0.16
LINC02006-203ENST00000493214 C1QBPQ07021 282 aaKnown RBP16.03■□□□□ 0.16
LINC02006-203ENST00000493214 MROH2BQ7Z745 1585 aa16.02■□□□□ 0.16
LINC02006-203ENST00000493214 ATAD2BQ9ULI0 1458 aa15.97■□□□□ 0.15
LINC02006-203ENST00000493214 PEG3Q9GZU2 1588 aa15.96■□□□□ 0.14
LINC02006-203ENST00000493214 RSF1Q96T23 1441 aaPredicted RBP15.95■□□□□ 0.14
LINC02006-203ENST00000493214 NCAPD3P42695 1498 aa15.95■□□□□ 0.14
LINC02006-203ENST00000493214 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.92■□□□□ 0.14
LINC02006-203ENST00000493214 BAZ1BQ9UIG0 1483 aaKnown RBP15.91■□□□□ 0.14
LINC02006-203ENST00000493214 HMGXB3Q12766 1538 aa15.9■□□□□ 0.14
LINC02006-203ENST00000493214 WIZO95785 1651 aa15.86■□□□□ 0.13
LINC02006-203ENST00000493214 KCNA4P22459 653 aa15.84■□□□□ 0.13
LINC02006-203ENST00000493214 SUPT5HO00267 1087 aaKnown RBP15.81■□□□□ 0.12
LINC02006-203ENST00000493214 TOP2AP11388 1531 aaKnown RBP15.76■□□□□ 0.11
LINC02006-203ENST00000493214 U3KPZ7 1027 aaPredicted RBP15.62■□□□□ 0.09
LINC02006-203ENST00000493214 CCDC88BA6NC98 1476 aa15.56■□□□□ 0.08
LINC02006-203ENST00000493214 LAMC3Q9Y6N6 1575 aa15.53■□□□□ 0.08
LINC02006-203ENST00000493214 CADPSQ9ULU8 1353 aa15.52■□□□□ 0.08
LINC02006-203ENST00000493214 SLC4A2P04920 1241 aa15.48■□□□□ 0.07
LINC02006-203ENST00000493214 PDS5BQ9NTI5 1447 aa15.46■□□□□ 0.07
LINC02006-203ENST00000493214 SPINK5Q9NQ38 1064 aaPredicted RBP15.45■□□□□ 0.06
LINC02006-203ENST00000493214 CFTRP13569 1480 aa15.45■□□□□ 0.06
LINC02006-203ENST00000493214 ERCC6Q03468 1493 aa15.42■□□□□ 0.06
LINC02006-203ENST00000493214 NESP48681 1621 aa15.42■□□□□ 0.06
LINC02006-203ENST00000493214 CAPN15O75808 1086 aa15.36■□□□□ 0.05
LINC02006-203ENST00000493214 PRDM2Q13029 1718 aa15.36■□□□□ 0.05
LINC02006-203ENST00000493214 FANCD2Q9BXW9 1451 aa15.33■□□□□ 0.05
LINC02006-203ENST00000493214 CEP164Q9UPV0 1460 aa15.32■□□□□ 0.04
LINC02006-203ENST00000493214 DSG3P32926 999 aa15.3■□□□□ 0.04
LINC02006-203ENST00000493214 KIF21AQ7Z4S6 1674 aa15.27■□□□□ 0.03
LINC02006-203ENST00000493214 MRC2Q9UBG0 1479 aa15.23■□□□□ 0.03
LINC02006-203ENST00000493214 ABCC8Q09428 1581 aa15.22■□□□□ 0.03
LINC02006-203ENST00000493214 THOC2Q8NI27 1593 aaKnown RBP15.15■□□□□ 0.02
LINC02006-203ENST00000493214 CUX2O14529 1486 aa15.14■□□□□ 0.01
LINC02006-203ENST00000493214 TRHP20396 242 aaPredicted RBP15.13■□□□□ 0.01
LINC02006-203ENST00000493214 WDR62O43379 1518 aa15.12■□□□□ 0.01
LINC02006-203ENST00000493214 DNMBPQ6XZF7 1577 aa15.11■□□□□ 0.01
LINC02006-203ENST00000493214 URB2Q14146 1524 aaKnown RBP15.1■□□□□ 0.01
LINC02006-203ENST00000493214 WRNQ14191 1432 aaPredicted RBP eCLIP15.09■□□□□ 0.01
LINC02006-203ENST00000493214 TOPBP1Q92547 1522 aa15.09■□□□□ 0.01
LINC02006-203ENST00000493214 ABCB7O75027 752 aa15.05■□□□□ -0
LINC02006-203ENST00000493214 CUX1P39880 1505 aa15.02■□□□□ -0
LINC02006-203ENST00000493214 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.01□□□□□ -0.01
LINC02006-203ENST00000493214 HNRNPUL2Q1KMD3 747 aaKnown RBP15.01□□□□□ -0.01
LINC02006-203ENST00000493214 TOP2BQ02880 1626 aa15.01□□□□□ -0.01
LINC02006-203ENST00000493214 APLP2Q06481 763 aa14.99□□□□□ -0.01
LINC02006-203ENST00000493214 ZNF219Q9P2Y4 722 aaPredicted RBP14.99□□□□□ -0.01
LINC02006-203ENST00000493214 IFT140Q96RY7 1462 aa14.99□□□□□ -0.01
LINC02006-203ENST00000493214 BIVM-ERCC5R4GMW8 1640 aa14.99□□□□□ -0.01
LINC02006-203ENST00000493214 FGD5Q6ZNL6 1462 aa14.98□□□□□ -0.01
LINC02006-203ENST00000493214 TRIM41Q8WV44 630 aa14.98□□□□□ -0.01
LINC02006-203ENST00000493214 SOGA1O94964 1423 aa14.97□□□□□ -0.01
LINC02006-203ENST00000493214 POLA1P09884 1462 aaPredicted RBP14.96□□□□□ -0.01
LINC02006-203ENST00000493214 SYNJ1O43426 1573 aa14.96□□□□□ -0.01
LINC02006-203ENST00000493214 SAMD1Q6SPF0 538 aaPredicted RBP14.95□□□□□ -0.02
LINC02006-203ENST00000493214 SLC4A1APQ9BWU0 796 aaKnown RBP14.89□□□□□ -0.03
LINC02006-203ENST00000493214 RAD54L2Q9Y4B4 1467 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms