Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 ZNF304-201ENST00000282286 4202 ntAPPRIS P3 TSL 2 BASIC9.45□□□□□ -0.9
LMO3Q8TAP4 LINC02112-201ENST00000511616 1847 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
LMO3Q8TAP4 SEMA4D-207ENST00000420987 4275 ntTSL 5 BASIC9.45□□□□□ -0.9
LMO3Q8TAP4 KIF13A-213ENST00000636847 5538 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
LMO3Q8TAP4 LINC00558-201ENST00000569422 3163 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
LMO3Q8TAP4 SP100-206ENST00000409897 2037 ntTSL 2 BASIC9.44□□□□□ -0.9
LMO3Q8TAP4 AC005722.2-201ENST00000577087 3370 ntBASIC9.44□□□□□ -0.9
LMO3Q8TAP4 MAGI2-214ENST00000628781 2013 ntTSL 2 BASIC9.44□□□□□ -0.9
LMO3Q8TAP4 KANSL1-205ENST00000572904 4973 ntAPPRIS P3 TSL 5 BASIC9.44□□□□□ -0.9
LMO3Q8TAP4 AL022323.3-201ENST00000623888 5388 ntBASIC9.44□□□□□ -0.9
LMO3Q8TAP4 POU6F2-201ENST00000403058 2335 ntTSL 5 BASIC9.44□□□□□ -0.9
LMO3Q8TAP4 EDA-213ENST00000616899 4643 ntTSL 5 BASIC9.44□□□□□ -0.9
LMO3Q8TAP4 COL4A6-202ENST00000372216 6570 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
LMO3Q8TAP4 BCO2-201ENST00000357685 2930 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
LMO3Q8TAP4 ADAMTS12-203ENST00000504830 8774 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
LMO3Q8TAP4 NPC2-201ENST00000238633 796 ntAPPRIS ALT1 TSL 3 BASIC9.44□□□□□ -0.9
LMO3Q8TAP4 SSX2-202ENST00000337502 1292 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
LMO3Q8TAP4 TRBV27-201ENST00000390399 387 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
LMO3Q8TAP4 TRAV8-6-201ENST00000390443 561 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
LMO3Q8TAP4 RN7SKP110-201ENST00000410146 285 ntBASIC9.44□□□□□ -0.9
LMO3Q8TAP4 LINC02539-201ENST00000411615 737 ntTSL 2 BASIC9.44□□□□□ -0.9
LMO3Q8TAP4 MRPS31P5-202ENST00000423686 920 ntBASIC9.44□□□□□ -0.9
LMO3Q8TAP4 CD46P1-201ENST00000441364 763 ntBASIC9.44□□□□□ -0.9
LMO3Q8TAP4 AC105393.1-202ENST00000449621 598 ntTSL 3 BASIC9.44□□□□□ -0.9
LMO3Q8TAP4 AL139383.1-201ENST00000454681 892 ntTSL 5 BASIC9.44□□□□□ -0.9
LMO3Q8TAP4 RN7SL800P-201ENST00000484823 280 ntBASIC9.44□□□□□ -0.9
LMO3Q8TAP4 ATOX1-202ENST00000520382 466 ntTSL 5 BASIC9.44□□□□□ -0.9
LMO3Q8TAP4 OSGEPL1-AS1-201ENST00000520651 508 ntTSL 2 BASIC9.44□□□□□ -0.9
LMO3Q8TAP4 ATOX1-205ENST00000522314 724 ntTSL 2 BASIC9.44□□□□□ -0.9
LMO3Q8TAP4 OR5G1P-201ENST00000525221 946 ntBASIC9.44□□□□□ -0.9
LMO3Q8TAP4 RAN-211ENST00000541679 572 ntTSL 5 BASIC9.44□□□□□ -0.9
LMO3Q8TAP4 PSMA3-AS1-211ENST00000556225 839 ntTSL 4 BASIC9.44□□□□□ -0.9
LMO3Q8TAP4 KARS-209ENST00000568378 459 ntTSL 5 BASIC9.44□□□□□ -0.9
LMO3Q8TAP4 AL121830.1-203ENST00000598694 701 ntTSL 5 BASIC9.44□□□□□ -0.9
LMO3Q8TAP4 AL137002.1-201ENST00000600642 182 ntBASIC9.44□□□□□ -0.9
LMO3Q8TAP4 SNX18P5-201ENST00000619873 868 ntBASIC9.44□□□□□ -0.9
LMO3Q8TAP4 AC008514.2-201ENST00000522096 1337 ntBASIC9.44□□□□□ -0.9
LMO3Q8TAP4 MYLK-220ENST00000578202 1447 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
LMO3Q8TAP4 NOL8-229ENST00000545558 4343 ntAPPRIS P3 TSL 5 BASIC9.44□□□□□ -0.9
LMO3Q8TAP4 FBXW11P1-201ENST00000393804 1474 ntBASIC9.44□□□□□ -0.9
LMO3Q8TAP4 LINC01886-202ENST00000443205 1539 ntTSL 3 BASIC9.44□□□□□ -0.9
LMO3Q8TAP4 PLEKHA3-201ENST00000234453 13880 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
LMO3Q8TAP4 AP003086.1-201ENST00000513207 1642 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
LMO3Q8TAP4 PCLO-209ENST00000618073 1614 ntTSL 5 BASIC9.44□□□□□ -0.9
LMO3Q8TAP4 AC010997.6-201ENST00000623230 1645 ntBASIC9.44□□□□□ -0.9
LMO3Q8TAP4 SNX29-205ENST00000566228 8171 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
LMO3Q8TAP4 PPP2R3A-205ENST00000490467 1782 ntTSL 2 BASIC9.44□□□□□ -0.9
LMO3Q8TAP4 CLK1-201ENST00000321356 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
LMO3Q8TAP4 SCN5A-210ENST00000455624 7170 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
LMO3Q8TAP4 AC107959.2-201ENST00000501897 2636 ntTSL 2 BASIC9.44□□□□□ -0.9
LMO3Q8TAP4 FNDC3B-201ENST00000336824 7904 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
LMO3Q8TAP4 AL358473.1-202ENST00000458003 3496 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
LMO3Q8TAP4 LRRC37BP1-203ENST00000417404 4742 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
LMO3Q8TAP4 GAB3-202ENST00000369575 4718 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
LMO3Q8TAP4 ZNF23-202ENST00000358700 2692 ntTSL 5 BASIC9.43□□□□□ -0.9
LMO3Q8TAP4 AC011893.1-201ENST00000437007 1862 ntTSL 2 BASIC9.43□□□□□ -0.9
LMO3Q8TAP4 CYP4A11-204ENST00000462347 1775 ntTSL 5 BASIC9.43□□□□□ -0.9
LMO3Q8TAP4 NRG1-209ENST00000519301 1785 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
LMO3Q8TAP4 ATP2B2-201ENST00000352432 8593 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
LMO3Q8TAP4 DROSHA-201ENST00000344624 5102 ntAPPRIS P4 TSL 5 BASIC9.43□□□□□ -0.9
LMO3Q8TAP4 ARG1-202ENST00000356962 1468 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
LMO3Q8TAP4 AKR1C4-202ENST00000380448 1414 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
LMO3Q8TAP4 SNHG12-211ENST00000488745 1365 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
LMO3Q8TAP4 AC023050.4-201ENST00000538830 1380 ntBASIC9.43□□□□□ -0.9
LMO3Q8TAP4 SLMAP-219ENST00000494088 1305 ntTSL 2 BASIC9.43□□□□□ -0.9
LMO3Q8TAP4 IFNA1-201ENST00000276927 863 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
LMO3Q8TAP4 SNRNP40-202ENST00000373720 1087 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
LMO3Q8TAP4 U3.17-201ENST00000390863 203 ntBASIC9.43□□□□□ -0.9
LMO3Q8TAP4 RN7SKP194-201ENST00000411328 351 ntBASIC9.43□□□□□ -0.9
LMO3Q8TAP4 Z97987.1-202ENST00000411708 391 ntTSL 3 BASIC9.43□□□□□ -0.9
LMO3Q8TAP4 CD59-204ENST00000426650 741 ntAPPRIS P2 TSL 3 BASIC9.43□□□□□ -0.9
LMO3Q8TAP4 AC152007.1-201ENST00000428521 224 ntBASIC9.43□□□□□ -0.9
LMO3Q8TAP4 SRD5A3-AS1-202ENST00000510637 926 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
LMO3Q8TAP4 ACTR3C-205ENST00000539352 570 ntTSL 5 BASIC9.43□□□□□ -0.9
LMO3Q8TAP4 LMO3-222ENST00000540445 906 ntTSL 2 BASIC9.43□□□□□ -0.9
LMO3Q8TAP4 SPATA8-202ENST00000558553 406 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
LMO3Q8TAP4 AC090774.3-201ENST00000578666 742 ntBASIC9.43□□□□□ -0.9
LMO3Q8TAP4 ZNF527-204ENST00000587349 999 ntTSL 3 BASIC9.43□□□□□ -0.9
LMO3Q8TAP4 AC106872.12-201ENST00000622170 547 ntBASIC9.43□□□□□ -0.9
LMO3Q8TAP4 AC113189.6-201ENST00000636696 3591 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
LMO3Q8TAP4 LINC01140-201ENST00000461990 3181 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
LMO3Q8TAP4 HERC2P2-205ENST00000619021 5746 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
LMO3Q8TAP4 SLFN12-206ENST00000452764 2423 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
LMO3Q8TAP4 RTN3-206ENST00000377819 4937 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
LMO3Q8TAP4 PRNT-203ENST00000423718 2096 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
LMO3Q8TAP4 ZNF546-207ENST00000600094 3426 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
LMO3Q8TAP4 AP005230.1-205ENST00000639316 2015 ntTSL 5 BASIC9.43□□□□□ -0.9
LMO3Q8TAP4 AL008638.6-201ENST00000623947 4254 ntBASIC9.42□□□□□ -0.9
LMO3Q8TAP4 GJB6-201ENST00000241124 1808 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LMO3Q8TAP4 CERS6-AS1-201ENST00000425636 2890 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
LMO3Q8TAP4 SMIM12-204ENST00000446026 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LMO3Q8TAP4 NOTCH2NL-203ENST00000578207 5042 ntAPPRIS P2 TSL 5 BASIC9.42□□□□□ -0.9
LMO3Q8TAP4 USP17L15-202ENST00000621432 1680 ntAPPRIS P2 TSL 5 BASIC9.42□□□□□ -0.9
LMO3Q8TAP4 ADAMTS9-AS1-206ENST00000493124 1511 ntTSL 5 BASIC9.42□□□□□ -0.9
LMO3Q8TAP4 FLT1-206ENST00000615611 1476 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
LMO3Q8TAP4 BCDIN3D-201ENST00000333924 3253 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LMO3Q8TAP4 LETMD1-228ENST00000550929 1389 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
LMO3Q8TAP4 ASNSP1-202ENST00000641079 1352 ntBASIC9.42□□□□□ -0.9
LMO3Q8TAP4 RPRD2-203ENST00000401000 7605 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
LMO3Q8TAP4 THBS3-201ENST00000368378 3145 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms