RNA–Protein interactions for RNA: ENST00000234453.9

PLEKHA3-201, Transcript of pleckstrin homology domain containing A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLEKHA3, Length 13,880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHA3-201ENST00000234453 MYT1Q01538 1121 aa16.84■□□□□ 0.29
PLEKHA3-201ENST00000234453 PELP1Q8IZL8 1130 aaKnown RBP16.84■□□□□ 0.29
PLEKHA3-201ENST00000234453 DCAF8L2P0C7V8 631 aa16.27■□□□□ 0.19
PLEKHA3-201ENST00000234453 ERICH6Q7L0X2 663 aa16.04■□□□□ 0.16
PLEKHA3-201ENST00000234453 CENPBP07199 599 aaPredicted RBP15.99■□□□□ 0.15
PLEKHA3-201ENST00000234453 SUPT5HO00267 1087 aaKnown RBP15.98■□□□□ 0.15
PLEKHA3-201ENST00000234453 CCER1Q8TC90 406 aaPredicted RBP15.88■□□□□ 0.13
PLEKHA3-201ENST00000234453 EHMT2Q96KQ7 1210 aa15.74■□□□□ 0.11
PLEKHA3-201ENST00000234453 PCGF6Q9BYE7 350 aa15.7■□□□□ 0.1
PLEKHA3-201ENST00000234453 TTBK1Q5TCY1 1321 aaPredicted RBP15.68■□□□□ 0.1
PLEKHA3-201ENST00000234453 ZEB1P37275 1124 aaPredicted RBP15.66■□□□□ 0.1
PLEKHA3-201ENST00000234453 SHROOM4Q9ULL8 1493 aa15.61■□□□□ 0.09
PLEKHA3-201ENST00000234453 APLP2Q06481 763 aa15.5■□□□□ 0.07
PLEKHA3-201ENST00000234453 NEFLP07196 543 aa15.49■□□□□ 0.07
PLEKHA3-201ENST00000234453 YTHDC1Q96MU7 727 aaKnown RBP15.43■□□□□ 0.06
PLEKHA3-201ENST00000234453 NISCHQ9Y2I1 1504 aa15.3■□□□□ 0.04
PLEKHA3-201ENST00000234453 HRCP23327 699 aa15.22■□□□□ 0.03
PLEKHA3-201ENST00000234453 DAXXQ9UER7 740 aaPredicted RBP15.18■□□□□ 0.02
PLEKHA3-201ENST00000234453 FAM9AQ8IZU1 332 aaPredicted RBP15.11■□□□□ 0.01
PLEKHA3-201ENST00000234453 RTL5Q5HYW3 569 aaPredicted RBP15.04■□□□□ -0
PLEKHA3-201ENST00000234453 RANGAP1P46060 587 aaPredicted RBP14.86□□□□□ -0.03
PLEKHA3-201ENST00000234453 ZNF316A6NFI3 1004 aaPredicted RBP14.85□□□□□ -0.03
PLEKHA3-201ENST00000234453 TRIM26Q12899 539 aaPredicted RBP14.84□□□□□ -0.03
PLEKHA3-201ENST00000234453 TRIM41Q8WV44 630 aa14.75□□□□□ -0.05
PLEKHA3-201ENST00000234453 GTF3C3Q9Y5Q9 886 aa14.73□□□□□ -0.05
PLEKHA3-201ENST00000234453 PPARGC1BQ86YN6 1023 aaKnown RBP14.72□□□□□ -0.05
PLEKHA3-201ENST00000234453 GLIPR1L2Q4G1C9 344 aa14.69□□□□□ -0.06
PLEKHA3-201ENST00000234453 ATP1B4Q9UN42 357 aaPredicted RBP14.67□□□□□ -0.06
PLEKHA3-201ENST00000234453 UBTFP17480 764 aaKnown RBP14.67□□□□□ -0.06
PLEKHA3-201ENST00000234453 DIEXFQ68CQ4 756 aaKnown RBP14.65□□□□□ -0.06
PLEKHA3-201ENST00000234453 EIF5BO60841 1220 aaKnown RBP14.58□□□□□ -0.08
PLEKHA3-201ENST00000234453 CLSPNQ9HAW4 1339 aa14.57□□□□□ -0.08
PLEKHA3-201ENST00000234453 MYT1LQ9UL68 1186 aa14.53□□□□□ -0.08
PLEKHA3-201ENST00000234453 POLR3GLQ9BT43 218 aa14.51□□□□□ -0.09
PLEKHA3-201ENST00000234453 ACIN1Q9UKV3 1341 aaKnown RBP14.51□□□□□ -0.09
PLEKHA3-201ENST00000234453 BCANQ96GW7 911 aa14.47□□□□□ -0.09
PLEKHA3-201ENST00000234453 CDK11AQ9UQ88 783 aaPredicted RBP14.45□□□□□ -0.1
PLEKHA3-201ENST00000234453 CNGB1Q14028 1251 aaPredicted RBP14.41□□□□□ -0.1
PLEKHA3-201ENST00000234453 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.35□□□□□ -0.11
PLEKHA3-201ENST00000234453 ANP32AP39687 249 aaKnown RBP14.34□□□□□ -0.11
PLEKHA3-201ENST00000234453 ITGAEP38570 1179 aa14.34□□□□□ -0.11
PLEKHA3-201ENST00000234453 HNRNPUL2Q1KMD3 747 aaKnown RBP14.31□□□□□ -0.12
PLEKHA3-201ENST00000234453 SCAF1Q9H7N4 1312 aaKnown RBP14.23□□□□□ -0.13
PLEKHA3-201ENST00000234453 LOC105371045A0A1W2PR82 267 aa14.21□□□□□ -0.13
PLEKHA3-201ENST00000234453 BCL11AQ9H165 835 aa14.19□□□□□ -0.14
PLEKHA3-201ENST00000234453 ANP32BQ92688 251 aaKnown RBP14.17□□□□□ -0.14
PLEKHA3-201ENST00000234453 SLC4A1APQ9BWU0 796 aaKnown RBP14.16□□□□□ -0.14
PLEKHA3-201ENST00000234453 NPM2Q86SE8 214 aaKnown RBP14.13□□□□□ -0.15
PLEKHA3-201ENST00000234453 ANP32CO43423 234 aa14.13□□□□□ -0.15
PLEKHA3-201ENST00000234453 NBR1Q14596 966 aa14.1□□□□□ -0.15
PLEKHA3-201ENST00000234453 ANP32EQ9BTT0 268 aa14.1□□□□□ -0.15
PLEKHA3-201ENST00000234453 ZBTB47Q9UFB7 747 aaPredicted RBP14.08□□□□□ -0.16
PLEKHA3-201ENST00000234453 CANXP27824 592 aaKnown RBP14.06□□□□□ -0.16
PLEKHA3-201ENST00000234453 CHIC1Q5VXU3 224 aa14.02□□□□□ -0.17
PLEKHA3-201ENST00000234453 NEUROD1Q13562 356 aa14.01□□□□□ -0.17
PLEKHA3-201ENST00000234453 TNNT2P45379 298 aaPredicted RBP13.99□□□□□ -0.17
PLEKHA3-201ENST00000234453 HSP90AA1P07900 732 aaKnown RBP13.98□□□□□ -0.17
PLEKHA3-201ENST00000234453 FKBP8Q14318 412 aa13.95□□□□□ -0.18
PLEKHA3-201ENST00000234453 ARXQ96QS3 562 aa13.95□□□□□ -0.18
PLEKHA3-201ENST00000234453 FAM50AQ14320 339 aaKnown RBP13.91□□□□□ -0.18
PLEKHA3-201ENST00000234453 UPF2Q9HAU5 1272 aaKnown RBP13.88□□□□□ -0.19
PLEKHA3-201ENST00000234453 CCDC180Q9P1Z9 1646 aa13.87□□□□□ -0.19
PLEKHA3-201ENST00000234453 DCAF1Q9Y4B6 1507 aa13.85□□□□□ -0.19
PLEKHA3-201ENST00000234453 ZNF326Q5BKZ1 582 aaKnown RBP13.84□□□□□ -0.19
PLEKHA3-201ENST00000234453 ERICH6BQ5W0A0 696 aa13.82□□□□□ -0.2
PLEKHA3-201ENST00000234453 NEFMP07197 916 aa13.79□□□□□ -0.2
PLEKHA3-201ENST00000234453 TRIM52Q96A61 297 aa13.79□□□□□ -0.2
PLEKHA3-201ENST00000234453 CDK11BP21127 795 aaKnown RBP13.78□□□□□ -0.2
PLEKHA3-201ENST00000234453 NAP1L5Q96NT1 182 aaPredicted RBP13.75□□□□□ -0.21
PLEKHA3-201ENST00000234453 RTN4Q9NQC3 1192 aaKnown RBP13.75□□□□□ -0.21
PLEKHA3-201ENST00000234453 SLC24A1O60721 1099 aa13.72□□□□□ -0.21
PLEKHA3-201ENST00000234453 CCDC136Q96JN2 1154 aa13.72□□□□□ -0.21
PLEKHA3-201ENST00000234453 TRIM44Q96DX7 344 aaPredicted RBP13.72□□□□□ -0.21
PLEKHA3-201ENST00000234453 NCLP19338 710 aaKnown RBP13.71□□□□□ -0.21
PLEKHA3-201ENST00000234453 HNRNPUQ00839 825 aaKnown RBP eCLIP13.71□□□□□ -0.21
PLEKHA3-201ENST00000234453 DDRGK1Q96HY6 314 aa13.67□□□□□ -0.22
PLEKHA3-201ENST00000234453 DEKP35659 375 aaKnown RBP13.66□□□□□ -0.22
PLEKHA3-201ENST00000234453 BECN1Q14457 450 aa13.6□□□□□ -0.23
PLEKHA3-201ENST00000234453 NOP58Q9Y2X3 529 aaKnown RBP13.6□□□□□ -0.23
PLEKHA3-201ENST00000234453 IRX6P78412 446 aaPredicted RBP13.58□□□□□ -0.24
PLEKHA3-201ENST00000234453 FAM9BQ8IZU0 186 aa13.58□□□□□ -0.24
PLEKHA3-201ENST00000234453 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.57□□□□□ -0.24
PLEKHA3-201ENST00000234453 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.57□□□□□ -0.24
PLEKHA3-201ENST00000234453 PPM1GO15355 546 aaPredicted RBP13.56□□□□□ -0.24
PLEKHA3-201ENST00000234453 TONSLQ96HA7 1378 aa13.55□□□□□ -0.24
PLEKHA3-201ENST00000234453 DNTTIP2Q5QJE6 756 aaKnown RBP13.55□□□□□ -0.24
PLEKHA3-201ENST00000234453 MIER1Q8N108 512 aa13.54□□□□□ -0.24
PLEKHA3-201ENST00000234453 PTMAP06454 111 aaKnown RBP13.53□□□□□ -0.24
PLEKHA3-201ENST00000234453 CSRNP3Q8WYN3 585 aa13.52□□□□□ -0.24
PLEKHA3-201ENST00000234453 AMER1Q5JTC6 1135 aaPredicted RBP13.52□□□□□ -0.25
PLEKHA3-201ENST00000234453 DDX10Q13206 875 aaKnown RBP13.5□□□□□ -0.25
PLEKHA3-201ENST00000234453 GOLGA6L22H0YM25 854 aa13.49□□□□□ -0.25
PLEKHA3-201ENST00000234453 LAS1LQ9Y4W2 734 aaKnown RBP13.48□□□□□ -0.25
PLEKHA3-201ENST00000234453 SUPT16HQ9Y5B9 1047 aaKnown RBP13.46□□□□□ -0.25
PLEKHA3-201ENST00000234453 SALL2Q9Y467 1007 aaPredicted RBP13.45□□□□□ -0.26
PLEKHA3-201ENST00000234453 TMC1Q8TDI8 760 aa13.42□□□□□ -0.26
PLEKHA3-201ENST00000234453 L1TD1Q5T7N2 865 aaKnown RBP13.42□□□□□ -0.26
PLEKHA3-201ENST00000234453 MYH16Q9H6N6 1097 aa13.42□□□□□ -0.26
PLEKHA3-201ENST00000234453 RSPH6AQ9H0K4 717 aa13.39□□□□□ -0.27
PLEKHA3-201ENST00000234453 MRS2Q9HD23 443 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms