RNA–Protein interactions for RNA: ENST00000600094.5

ZNF546-207, Transcript of zinc finger protein 546, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZNF546, Length 3,426 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546-207ENST00000600094 NISCHQ9Y2I1 1504 aa17.03■□□□□ 0.32
ZNF546-207ENST00000600094 SHROOM4Q9ULL8 1493 aa14.91□□□□□ -0.02
ZNF546-207ENST00000600094 HRCP23327 699 aa14.9□□□□□ -0.02
ZNF546-207ENST00000600094 SUPT5HO00267 1087 aaKnown RBP14.85□□□□□ -0.03
ZNF546-207ENST00000600094 PCGF6Q9BYE7 350 aa14.62□□□□□ -0.07
ZNF546-207ENST00000600094 MYO15BQ96JP2 1530 aa14.59□□□□□ -0.07
ZNF546-207ENST00000600094 CHIC1Q5VXU3 224 aa14.59□□□□□ -0.07
ZNF546-207ENST00000600094 ZCCHC6Q5VYS8 1495 aaKnown RBP14.49□□□□□ -0.09
ZNF546-207ENST00000600094 PPARGC1BQ86YN6 1023 aaKnown RBP14.48□□□□□ -0.09
ZNF546-207ENST00000600094 DCAF1Q9Y4B6 1507 aa14.39□□□□□ -0.11
ZNF546-207ENST00000600094 PELP1Q8IZL8 1130 aaKnown RBP14.34□□□□□ -0.11
ZNF546-207ENST00000600094 TRIM26Q12899 539 aaPredicted RBP14.25□□□□□ -0.13
ZNF546-207ENST00000600094 CCDC180Q9P1Z9 1646 aa14.24□□□□□ -0.13
ZNF546-207ENST00000600094 LOC105371045A0A1W2PR82 267 aa14.18□□□□□ -0.14
ZNF546-207ENST00000600094 ZEB1P37275 1124 aaPredicted RBP14.17□□□□□ -0.14
ZNF546-207ENST00000600094 DCAF8L2P0C7V8 631 aa14.13□□□□□ -0.15
ZNF546-207ENST00000600094 SCAF1Q9H7N4 1312 aaKnown RBP13.98□□□□□ -0.17
ZNF546-207ENST00000600094 TRIM41Q8WV44 630 aa13.8□□□□□ -0.2
ZNF546-207ENST00000600094 MYT1Q01538 1121 aa13.8□□□□□ -0.2
ZNF546-207ENST00000600094 ABCC9O60706 1549 aa13.75□□□□□ -0.21
ZNF546-207ENST00000600094 ACIN1Q9UKV3 1341 aaKnown RBP13.73□□□□□ -0.21
ZNF546-207ENST00000600094 FAM9AQ8IZU1 332 aaPredicted RBP13.7□□□□□ -0.22
ZNF546-207ENST00000600094 CENPBP07199 599 aaPredicted RBP13.67□□□□□ -0.22
ZNF546-207ENST00000600094 RSF1Q96T23 1441 aaPredicted RBP13.66□□□□□ -0.22
ZNF546-207ENST00000600094 NEUROD1Q13562 356 aa13.65□□□□□ -0.22
ZNF546-207ENST00000600094 CCER1Q8TC90 406 aaPredicted RBP13.61□□□□□ -0.23
ZNF546-207ENST00000600094 GTF3C3Q9Y5Q9 886 aa13.59□□□□□ -0.23
ZNF546-207ENST00000600094 EHMT2Q96KQ7 1210 aa13.59□□□□□ -0.23
ZNF546-207ENST00000600094 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.58□□□□□ -0.24
ZNF546-207ENST00000600094 RB1CC1Q8TDY2 1594 aa13.58□□□□□ -0.24
ZNF546-207ENST00000600094 DIEXFQ68CQ4 756 aaKnown RBP13.57□□□□□ -0.24
ZNF546-207ENST00000600094 SCRIBQ14160 1630 aa13.47□□□□□ -0.25
ZNF546-207ENST00000600094 ZNF316A6NFI3 1004 aaPredicted RBP13.34□□□□□ -0.27
ZNF546-207ENST00000600094 WRNQ14191 1432 aaPredicted RBP eCLIP13.32□□□□□ -0.28
ZNF546-207ENST00000600094 YTHDC1Q96MU7 727 aaKnown RBP13.29□□□□□ -0.28
ZNF546-207ENST00000600094 TTBK1Q5TCY1 1321 aaPredicted RBP13.28□□□□□ -0.28
ZNF546-207ENST00000600094 CECR2Q9BXF3 1484 aa13.26□□□□□ -0.29
ZNF546-207ENST00000600094 MROH2BQ7Z745 1585 aa13.26□□□□□ -0.29
ZNF546-207ENST00000600094 CEP162Q5TB80 1403 aa13.24□□□□□ -0.29
ZNF546-207ENST00000600094 WIZO95785 1651 aa13.2□□□□□ -0.3
ZNF546-207ENST00000600094 TNIKQ9UKE5 1360 aa13.18□□□□□ -0.3
ZNF546-207ENST00000600094 MIER1Q8N108 512 aa13.18□□□□□ -0.3
ZNF546-207ENST00000600094 EIF4G1Q04637 1599 aaKnown RBP13.17□□□□□ -0.3
ZNF546-207ENST00000600094 BAZ1AQ9NRL2 1556 aaPredicted RBP13.17□□□□□ -0.3
ZNF546-207ENST00000600094 CCDC88BA6NC98 1476 aa13.11□□□□□ -0.31
ZNF546-207ENST00000600094 NACADO15069 1562 aa13.11□□□□□ -0.31
ZNF546-207ENST00000600094 CLSPNQ9HAW4 1339 aa13.11□□□□□ -0.31
ZNF546-207ENST00000600094 EEA1Q15075 1411 aa13.11□□□□□ -0.31
ZNF546-207ENST00000600094 UBTFP17480 764 aaKnown RBP13.1□□□□□ -0.31
ZNF546-207ENST00000600094 ABCC8Q09428 1581 aa13.08□□□□□ -0.32
ZNF546-207ENST00000600094 CSRNP3Q8WYN3 585 aa13.07□□□□□ -0.32
ZNF546-207ENST00000600094 SOGA1O94964 1423 aa13.06□□□□□ -0.32
ZNF546-207ENST00000600094 HNRNPUL2Q1KMD3 747 aaKnown RBP13.05□□□□□ -0.32
ZNF546-207ENST00000600094 GOLGA3Q08378 1498 aa13.04□□□□□ -0.32
ZNF546-207ENST00000600094 TOP2AP11388 1531 aaKnown RBP13.02□□□□□ -0.33
ZNF546-207ENST00000600094 SUPT16HQ9Y5B9 1047 aaKnown RBP12.98□□□□□ -0.33
ZNF546-207ENST00000600094 APLP2Q06481 763 aa12.96□□□□□ -0.33
ZNF546-207ENST00000600094 RUSC2Q8N2Y8 1516 aa12.94□□□□□ -0.34
ZNF546-207ENST00000600094 SMARCA2P51531 1590 aa12.94□□□□□ -0.34
ZNF546-207ENST00000600094 CEP164Q9UPV0 1460 aa12.92□□□□□ -0.34
ZNF546-207ENST00000600094 CLIP1P30622 1438 aa12.91□□□□□ -0.34
ZNF546-207ENST00000600094 VPS8Q8N3P4 1428 aa12.9□□□□□ -0.34
ZNF546-207ENST00000600094 ANP32EQ9BTT0 268 aa12.9□□□□□ -0.34
ZNF546-207ENST00000600094 TSHZ2Q9NRE2 1034 aa12.87□□□□□ -0.35
ZNF546-207ENST00000600094 SMARCA4P51532 1647 aa12.87□□□□□ -0.35
ZNF546-207ENST00000600094 KIF21BO75037 1637 aa12.85□□□□□ -0.35
ZNF546-207ENST00000600094 DHX57Q6P158 1386 aaKnown RBP12.82□□□□□ -0.36
ZNF546-207ENST00000600094 BAZ1BQ9UIG0 1483 aaKnown RBP12.81□□□□□ -0.36
ZNF546-207ENST00000600094 BCL11AQ9H165 835 aa12.75□□□□□ -0.37
ZNF546-207ENST00000600094 RANGAP1P46060 587 aaPredicted RBP12.73□□□□□ -0.37
ZNF546-207ENST00000600094 RAPGEF2Q9Y4G8 1499 aa12.73□□□□□ -0.37
ZNF546-207ENST00000600094 SYNJ1O43426 1573 aa12.71□□□□□ -0.37
ZNF546-207ENST00000600094 BCANQ96GW7 911 aa12.68□□□□□ -0.38
ZNF546-207ENST00000600094 NEFLP07196 543 aa12.66□□□□□ -0.38
ZNF546-207ENST00000600094 FKBP8Q14318 412 aa12.66□□□□□ -0.38
ZNF546-207ENST00000600094 RRBP1Q9P2E9 1410 aaKnown RBP12.65□□□□□ -0.38
ZNF546-207ENST00000600094 CUX2O14529 1486 aa12.63□□□□□ -0.39
ZNF546-207ENST00000600094 KCNH8Q96L42 1107 aa12.63□□□□□ -0.39
ZNF546-207ENST00000600094 KANK4Q5T7N3 995 aaPredicted RBP12.61□□□□□ -0.39
ZNF546-207ENST00000600094 CCNB3Q8WWL7 1395 aa12.6□□□□□ -0.39
ZNF546-207ENST00000600094 RBM19Q9Y4C8 960 aaKnown RBP12.6□□□□□ -0.39
ZNF546-207ENST00000600094 ARAP1Q96P48 1450 aa12.6□□□□□ -0.39
ZNF546-207ENST00000600094 ERICH3Q5RHP9 1530 aa12.59□□□□□ -0.39
ZNF546-207ENST00000600094 PEG3Q9GZU2 1588 aa12.59□□□□□ -0.39
ZNF546-207ENST00000600094 DDX10Q13206 875 aaKnown RBP12.56□□□□□ -0.4
ZNF546-207ENST00000600094 ITGAEP38570 1179 aa12.55□□□□□ -0.4
ZNF546-207ENST00000600094 PRXQ9BXM0 1461 aa12.54□□□□□ -0.4
ZNF546-207ENST00000600094 UNC13AQ9UPW8 1703 aa12.54□□□□□ -0.4
ZNF546-207ENST00000600094 RAB3GAP2Q9H2M9 1393 aa12.53□□□□□ -0.4
ZNF546-207ENST00000600094 TOP2BQ02880 1626 aa12.53□□□□□ -0.4
ZNF546-207ENST00000600094 CCER2I3L3R5 266 aa12.52□□□□□ -0.41
ZNF546-207ENST00000600094 MAPKBP1O60336 1514 aa12.51□□□□□ -0.41
ZNF546-207ENST00000600094 ANP32CO43423 234 aa12.5□□□□□ -0.41
ZNF546-207ENST00000600094 TRIM52Q96A61 297 aa12.49□□□□□ -0.41
ZNF546-207ENST00000600094 PPP1R15AO75807 674 aaPredicted RBP12.48□□□□□ -0.41
ZNF546-207ENST00000600094 TIMELESSQ9UNS1 1208 aa12.47□□□□□ -0.41
ZNF546-207ENST00000600094 ERICH6Q7L0X2 663 aa12.47□□□□□ -0.41
ZNF546-207ENST00000600094 SETD5Q9C0A6 1442 aa12.47□□□□□ -0.41
ZNF546-207ENST00000600094 ATAD2BQ9ULI0 1458 aa12.47□□□□□ -0.41
ZNF546-207ENST00000600094 PABPN1Q86U42 306 aaKnown RBP eCLIP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms