RNA–Protein interactions for RNA: ENST00000276927.2

IFNA1-201, Transcript of interferon alpha 1, humanhuman

APPRIS P1 BASIC

Gene IFNA1, Length 863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1-201ENST00000276927 AEBP2Q6ZN18 517 aaPredicted RBP39.46■■■■□ 3.91
IFNA1-201ENST00000276927 CHIC1Q5VXU3 224 aa37.85■■■■□ 3.65
IFNA1-201ENST00000276927 SENP3Q9H4L4 574 aaPredicted RBP33.46■■■□□ 2.95
IFNA1-201ENST00000276927 PHF23Q9BUL5 403 aaPredicted RBP33.28■■■□□ 2.92
IFNA1-201ENST00000276927 FOXD1Q16676 465 aa31.21■■■□□ 2.59
IFNA1-201ENST00000276927 PLPPR3Q6T4P5 718 aa30.4■■■□□ 2.46
IFNA1-201ENST00000276927 PPP6R1Q9UPN7 881 aa29.57■■■□□ 2.32
IFNA1-201ENST00000276927 ADRA2BP18089 450 aa29.48■■■□□ 2.31
IFNA1-201ENST00000276927 PIAS4Q8N2W9 510 aaPredicted RBP29.23■■■□□ 2.27
IFNA1-201ENST00000276927 MSH5O43196 834 aa28.94■■■□□ 2.22
IFNA1-201ENST00000276927 POTEDQ86YR6 584 aa27.54■■■□□ 2
IFNA1-201ENST00000276927 MAPK8IP2Q13387 824 aaPredicted RBP26.96■■□□□ 1.91
IFNA1-201ENST00000276927 SCAF1Q9H7N4 1312 aaKnown RBP26.84■■□□□ 1.89
IFNA1-201ENST00000276927 PPP4R3CPQ6ZMV5 832 aa26.74■■□□□ 1.87
IFNA1-201ENST00000276927 DMRT2Q9Y5R5 561 aa26.64■■□□□ 1.86
IFNA1-201ENST00000276927 CNKSR2Q8WXI2 1034 aa26.1■■□□□ 1.77
IFNA1-201ENST00000276927 HOXD11P31277 338 aaPredicted RBP25.85■■□□□ 1.73
IFNA1-201ENST00000276927 NCBP3Q53F19 620 aaKnown RBP25.77■■□□□ 1.72
IFNA1-201ENST00000276927 RNF216Q9NWF9 866 aaPredicted RBP25.76■■□□□ 1.71
IFNA1-201ENST00000276927 NPM3O75607 178 aaKnown RBP25.5■■□□□ 1.67
IFNA1-201ENST00000276927 DCAF8L1A6NGE4 600 aa25.48■■□□□ 1.67
IFNA1-201ENST00000276927 KCNA4P22459 653 aa25.45■■□□□ 1.66
IFNA1-201ENST00000276927 DNAJC5BQ9UF47 199 aa24.83■■□□□ 1.57
IFNA1-201ENST00000276927 RNF39Q9H2S5 420 aa24.8■■□□□ 1.56
IFNA1-201ENST00000276927 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.58■■□□□ 1.53
IFNA1-201ENST00000276927 CACNB1Q02641 598 aaPredicted RBP24.56■■□□□ 1.52
IFNA1-201ENST00000276927 C1QBPQ07021 282 aaKnown RBP24.4■■□□□ 1.5
IFNA1-201ENST00000276927 SLC4A2P04920 1241 aa24.27■■□□□ 1.48
IFNA1-201ENST00000276927 U3KPZ7 1027 aaPredicted RBP24.19■■□□□ 1.46
IFNA1-201ENST00000276927 SLC4A1APQ9BWU0 796 aaKnown RBP24.05■■□□□ 1.44
IFNA1-201ENST00000276927 SPINK5Q9NQ38 1064 aaPredicted RBP23.72■■□□□ 1.39
IFNA1-201ENST00000276927 CAPN15O75808 1086 aa23.58■■□□□ 1.37
IFNA1-201ENST00000276927 FOXD4L1Q9NU39 408 aa23.55■■□□□ 1.36
IFNA1-201ENST00000276927 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.53■■□□□ 1.36
IFNA1-201ENST00000276927 MYCNP04198 464 aaPredicted RBP23.53■■□□□ 1.36
IFNA1-201ENST00000276927 HNRNPUL2Q1KMD3 747 aaKnown RBP23.53■■□□□ 1.36
IFNA1-201ENST00000276927 ZBTB22O15209 634 aa23.46■■□□□ 1.35
IFNA1-201ENST00000276927 SAMD1Q6SPF0 538 aaPredicted RBP23.46■■□□□ 1.35
IFNA1-201ENST00000276927 APLP2Q06481 763 aa23.4■■□□□ 1.34
IFNA1-201ENST00000276927 DSG3P32926 999 aa23.38■■□□□ 1.33
IFNA1-201ENST00000276927 TRHP20396 242 aaPredicted RBP23.33■■□□□ 1.33
IFNA1-201ENST00000276927 ZNF219Q9P2Y4 722 aaPredicted RBP23.27■■□□□ 1.32
IFNA1-201ENST00000276927 ABCB7O75027 752 aa23.12■■□□□ 1.29
IFNA1-201ENST00000276927 ATF5Q9Y2D1 282 aaPredicted RBP23.05■■□□□ 1.28
IFNA1-201ENST00000276927 POLA2Q14181 598 aa22.81■■□□□ 1.24
IFNA1-201ENST00000276927 ATXN8OSP0DMR3 200 aa22.75■■□□□ 1.23
IFNA1-201ENST00000276927 CSRNP3Q8WYN3 585 aa22.75■■□□□ 1.23
IFNA1-201ENST00000276927 EHMT2Q96KQ7 1210 aa22.67■■□□□ 1.22
IFNA1-201ENST00000276927 ZBTB12Q9Y330 459 aaPredicted RBP22.31■■□□□ 1.16
IFNA1-201ENST00000276927 RBM42Q9BTD8 480 aaKnown RBP22.2■■□□□ 1.14
IFNA1-201ENST00000276927 NISCHQ9Y2I1 1504 aa22.16■■□□□ 1.14
IFNA1-201ENST00000276927 OSCARQ8IYS5 282 aa22.09■■□□□ 1.13
IFNA1-201ENST00000276927 MKRN4PQ13434 485 aaPredicted RBP22■■□□□ 1.11
IFNA1-201ENST00000276927 FBLN2P98095 1184 aa21.98■■□□□ 1.11
IFNA1-201ENST00000276927 AKT1S1Q96B36 256 aa21.84■■□□□ 1.09
IFNA1-201ENST00000276927 SPDYE2BA6NHP3 402 aa21.71■■□□□ 1.07
IFNA1-201ENST00000276927 SPDYE6P0CI01 402 aa21.71■■□□□ 1.07
IFNA1-201ENST00000276927 SPDYE2Q495Y8 402 aa21.71■■□□□ 1.07
IFNA1-201ENST00000276927 REM2Q8IYK8 340 aaPredicted RBP21.66■■□□□ 1.06
IFNA1-201ENST00000276927 POTEHQ6S545 545 aa21.64■■□□□ 1.05
IFNA1-201ENST00000276927 CHRDL2Q6WN34 429 aa21.6■■□□□ 1.05
IFNA1-201ENST00000276927 ZNF692Q9BU19 519 aaPredicted RBP21.52■■□□□ 1.04
IFNA1-201ENST00000276927 SSUH2Q9Y2M2 353 aa21.52■■□□□ 1.04
IFNA1-201ENST00000276927 PITPNM1O00562 1244 aa21.44■■□□□ 1.02
IFNA1-201ENST00000276927 PABPN1Q86U42 306 aaKnown RBP eCLIP21.24■□□□□ 0.99
IFNA1-201ENST00000276927 PIP4P2Q8N4L2 257 aa21.21■□□□□ 0.99
IFNA1-201ENST00000276927 SPDYE1Q8NFV5 336 aaPredicted RBP21.2■□□□□ 0.98
IFNA1-201ENST00000276927 FXR2P51116 673 aaKnown RBP eCLIP21.16■□□□□ 0.98
IFNA1-201ENST00000276927 CLEC11AQ9Y240 323 aa21.16■□□□□ 0.98
IFNA1-201ENST00000276927 SPDYE4A6NLX3 237 aa21.12■□□□□ 0.97
IFNA1-201ENST00000276927 PRR29P0C7W0 189 aa20.86■□□□□ 0.93
IFNA1-201ENST00000276927 PRKAR2AP13861 404 aaKnown RBP20.86■□□□□ 0.93
IFNA1-201ENST00000276927 CHADLQ6NUI6 762 aa20.77■□□□□ 0.92
IFNA1-201ENST00000276927 PROM2Q8N271 834 aa20.74■□□□□ 0.91
IFNA1-201ENST00000276927 STAG3Q9UJ98 1225 aa20.69■□□□□ 0.9
IFNA1-201ENST00000276927 HAX1O00165 279 aa20.65■□□□□ 0.9
IFNA1-201ENST00000276927 FKBP8Q14318 412 aa20.56■□□□□ 0.88
IFNA1-201ENST00000276927 EVX2Q03828 476 aa20.53■□□□□ 0.88
IFNA1-201ENST00000276927 CREBZFQ9NS37 354 aa20.52■□□□□ 0.88
IFNA1-201ENST00000276927 SP7Q8TDD2 431 aaPredicted RBP20.5■□□□□ 0.87
IFNA1-201ENST00000276927 FARP1Q9Y4F1 1045 aaPredicted RBP20.47■□□□□ 0.87
IFNA1-201ENST00000276927 C19orf67A6NJJ6 358 aa20.46■□□□□ 0.87
IFNA1-201ENST00000276927 MNX1P50219 401 aaPredicted RBP20.26■□□□□ 0.83
IFNA1-201ENST00000276927 CD44P16070 742 aaKnown RBP20.23■□□□□ 0.83
IFNA1-201ENST00000276927 MIER1Q8N108 512 aa20.07■□□□□ 0.8
IFNA1-201ENST00000276927 NPM1P06748 294 aaKnown RBP eCLIP20.06■□□□□ 0.8
IFNA1-201ENST00000276927 GABBR2O75899 941 aa20.04■□□□□ 0.8
IFNA1-201ENST00000276927 ZRANB1Q9UGI0 708 aa20.01■□□□□ 0.79
IFNA1-201ENST00000276927 PLCD3Q8N3E9 789 aa19.96■□□□□ 0.79
IFNA1-201ENST00000276927 PLEKHG5O94827 1062 aa19.94■□□□□ 0.78
IFNA1-201ENST00000276927 ZNF579Q8NAF0 562 aaKnown RBP19.94■□□□□ 0.78
IFNA1-201ENST00000276927 CCDC180Q9P1Z9 1646 aa19.92■□□□□ 0.78
IFNA1-201ENST00000276927 FBXO3Q9UK99 471 aa19.92■□□□□ 0.78
IFNA1-201ENST00000276927 PAK3O75914 559 aaPredicted RBP19.87■□□□□ 0.77
IFNA1-201ENST00000276927 PHF12Q96QT6 1004 aa19.82■□□□□ 0.76
IFNA1-201ENST00000276927 ABCC9O60706 1549 aa19.81■□□□□ 0.76
IFNA1-201ENST00000276927 CLCN6P51797 869 aa19.78■□□□□ 0.76
IFNA1-201ENST00000276927 TSPYL2Q9H2G4 693 aaPredicted RBP19.78■□□□□ 0.76
IFNA1-201ENST00000276927 RASEFQ8IZ41 740 aa19.77■□□□□ 0.76
IFNA1-201ENST00000276927 VASPP50552 380 aaPredicted RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms