RNA–Protein interactions for RNA: ENST00000513207.2

AP003086.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP003086.1, Length 1,642 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003086.1-201ENST00000513207 AEBP2Q6ZN18 517 aaPredicted RBP24.86■■□□□ 1.57
AP003086.1-201ENST00000513207 CHIC1Q5VXU3 224 aa23.3■■□□□ 1.32
AP003086.1-201ENST00000513207 SENP3Q9H4L4 574 aaPredicted RBP21.38■■□□□ 1.01
AP003086.1-201ENST00000513207 PHF23Q9BUL5 403 aaPredicted RBP20.96■□□□□ 0.95
AP003086.1-201ENST00000513207 FOXD1Q16676 465 aa19.93■□□□□ 0.78
AP003086.1-201ENST00000513207 NISCHQ9Y2I1 1504 aa19.92■□□□□ 0.78
AP003086.1-201ENST00000513207 POTEDQ86YR6 584 aa19.33■□□□□ 0.69
AP003086.1-201ENST00000513207 MSH5O43196 834 aa18.92■□□□□ 0.62
AP003086.1-201ENST00000513207 PIAS4Q8N2W9 510 aaPredicted RBP18.5■□□□□ 0.55
AP003086.1-201ENST00000513207 PLPPR3Q6T4P5 718 aa18.27■□□□□ 0.51
AP003086.1-201ENST00000513207 PPP6R1Q9UPN7 881 aa18.18■□□□□ 0.5
AP003086.1-201ENST00000513207 ADRA2BP18089 450 aa18.09■□□□□ 0.49
AP003086.1-201ENST00000513207 CCDC180Q9P1Z9 1646 aa17.47■□□□□ 0.39
AP003086.1-201ENST00000513207 DMRT2Q9Y5R5 561 aa16.85■□□□□ 0.29
AP003086.1-201ENST00000513207 MAPK8IP2Q13387 824 aaPredicted RBP16.76■□□□□ 0.27
AP003086.1-201ENST00000513207 ZCCHC6Q5VYS8 1495 aaKnown RBP16.73■□□□□ 0.27
AP003086.1-201ENST00000513207 SCAF1Q9H7N4 1312 aaKnown RBP16.65■□□□□ 0.26
AP003086.1-201ENST00000513207 CACNB1Q02641 598 aaPredicted RBP16.52■□□□□ 0.24
AP003086.1-201ENST00000513207 DCAF1Q9Y4B6 1507 aa16.51■□□□□ 0.23
AP003086.1-201ENST00000513207 ABCC9O60706 1549 aa16.49■□□□□ 0.23
AP003086.1-201ENST00000513207 DCAF8L2P0C7V8 631 aa16.39■□□□□ 0.21
AP003086.1-201ENST00000513207 MYO15BQ96JP2 1530 aa16.35■□□□□ 0.21
AP003086.1-201ENST00000513207 NACADO15069 1562 aa16.25■□□□□ 0.19
AP003086.1-201ENST00000513207 SHROOM4Q9ULL8 1493 aa16.14■□□□□ 0.17
AP003086.1-201ENST00000513207 RB1CC1Q8TDY2 1594 aa16.13■□□□□ 0.17
AP003086.1-201ENST00000513207 DCAF8L1A6NGE4 600 aa16.13■□□□□ 0.17
AP003086.1-201ENST00000513207 RNF39Q9H2S5 420 aa16.08■□□□□ 0.16
AP003086.1-201ENST00000513207 HOXD11P31277 338 aaPredicted RBP16.02■□□□□ 0.16
AP003086.1-201ENST00000513207 SCRIBQ14160 1630 aa16■□□□□ 0.15
AP003086.1-201ENST00000513207 PPP4R3CPQ6ZMV5 832 aa15.9■□□□□ 0.14
AP003086.1-201ENST00000513207 C1QBPQ07021 282 aaKnown RBP15.83■□□□□ 0.13
AP003086.1-201ENST00000513207 UNC13AQ9UPW8 1703 aa15.81■□□□□ 0.12
AP003086.1-201ENST00000513207 CNKSR2Q8WXI2 1034 aa15.76■□□□□ 0.11
AP003086.1-201ENST00000513207 RNF216Q9NWF9 866 aaPredicted RBP15.76■□□□□ 0.11
AP003086.1-201ENST00000513207 DNAJC5BQ9UF47 199 aa15.65■□□□□ 0.1
AP003086.1-201ENST00000513207 KCNA4P22459 653 aa15.64■□□□□ 0.09
AP003086.1-201ENST00000513207 BICRAQ9NZM4 1560 aa15.61■□□□□ 0.09
AP003086.1-201ENST00000513207 SUPT5HO00267 1087 aaKnown RBP15.49■□□□□ 0.07
AP003086.1-201ENST00000513207 PABPN1Q86U42 306 aaKnown RBP eCLIP15.49■□□□□ 0.07
AP003086.1-201ENST00000513207 CECR2Q9BXF3 1484 aa15.45■□□□□ 0.06
AP003086.1-201ENST00000513207 BAZ1AQ9NRL2 1556 aaPredicted RBP15.41■□□□□ 0.06
AP003086.1-201ENST00000513207 RSF1Q96T23 1441 aaPredicted RBP15.4■□□□□ 0.06
AP003086.1-201ENST00000513207 EHMT2Q96KQ7 1210 aa15.38■□□□□ 0.05
AP003086.1-201ENST00000513207 MROH2BQ7Z745 1585 aa15.37■□□□□ 0.05
AP003086.1-201ENST00000513207 SMARCA4P51532 1647 aa15.35■□□□□ 0.05
AP003086.1-201ENST00000513207 WIZO95785 1651 aa15.26■□□□□ 0.03
AP003086.1-201ENST00000513207 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.25■□□□□ 0.03
AP003086.1-201ENST00000513207 NCBP3Q53F19 620 aaKnown RBP15.24■□□□□ 0.03
AP003086.1-201ENST00000513207 PEG3Q9GZU2 1588 aa15.17■□□□□ 0.02
AP003086.1-201ENST00000513207 EIF4G1Q04637 1599 aaKnown RBP15.16■□□□□ 0.02
AP003086.1-201ENST00000513207 TOP2AP11388 1531 aaKnown RBP15.12■□□□□ 0.01
AP003086.1-201ENST00000513207 SMARCA2P51531 1590 aa15.11■□□□□ 0.01
AP003086.1-201ENST00000513207 ATAD2BQ9ULI0 1458 aa15.08■□□□□ 0.01
AP003086.1-201ENST00000513207 POTEHQ6S545 545 aa15.05■□□□□ -0
AP003086.1-201ENST00000513207 BAZ1BQ9UIG0 1483 aaKnown RBP15.01□□□□□ -0.01
AP003086.1-201ENST00000513207 SLC4A1APQ9BWU0 796 aaKnown RBP14.99□□□□□ -0.01
AP003086.1-201ENST00000513207 HMGXB3Q12766 1538 aa14.98□□□□□ -0.01
AP003086.1-201ENST00000513207 NCAPD3P42695 1498 aa14.97□□□□□ -0.01
AP003086.1-201ENST00000513207 CC2D2AQ9P2K1 1620 aa14.95□□□□□ -0.02
AP003086.1-201ENST00000513207 NPM3O75607 178 aaKnown RBP14.95□□□□□ -0.02
AP003086.1-201ENST00000513207 CCDC88BA6NC98 1476 aa14.93□□□□□ -0.02
AP003086.1-201ENST00000513207 U3KPZ7 1027 aaPredicted RBP14.86□□□□□ -0.03
AP003086.1-201ENST00000513207 CSRNP3Q8WYN3 585 aa14.85□□□□□ -0.03
AP003086.1-201ENST00000513207 DSG3P32926 999 aa14.84□□□□□ -0.03
AP003086.1-201ENST00000513207 CAPN15O75808 1086 aa14.8□□□□□ -0.04
AP003086.1-201ENST00000513207 SPINK5Q9NQ38 1064 aaPredicted RBP14.77□□□□□ -0.04
AP003086.1-201ENST00000513207 PRDM2Q13029 1718 aa14.63□□□□□ -0.07
AP003086.1-201ENST00000513207 CFTRP13569 1480 aa14.62□□□□□ -0.07
AP003086.1-201ENST00000513207 TRIM41Q8WV44 630 aa14.59□□□□□ -0.07
AP003086.1-201ENST00000513207 ABCC8Q09428 1581 aa14.59□□□□□ -0.07
AP003086.1-201ENST00000513207 CADPSQ9ULU8 1353 aa14.57□□□□□ -0.08
AP003086.1-201ENST00000513207 WRNQ14191 1432 aaPredicted RBP eCLIP14.52□□□□□ -0.09
AP003086.1-201ENST00000513207 LAMC3Q9Y6N6 1575 aa14.51□□□□□ -0.09
AP003086.1-201ENST00000513207 APLP2Q06481 763 aa14.48□□□□□ -0.09
AP003086.1-201ENST00000513207 SYNJ1O43426 1573 aa14.47□□□□□ -0.09
AP003086.1-201ENST00000513207 NESP48681 1621 aa14.45□□□□□ -0.1
AP003086.1-201ENST00000513207 ZNF219Q9P2Y4 722 aaPredicted RBP14.44□□□□□ -0.1
AP003086.1-201ENST00000513207 TOP2BQ02880 1626 aa14.44□□□□□ -0.1
AP003086.1-201ENST00000513207 BIVM-ERCC5R4GMW8 1640 aa14.44□□□□□ -0.1
AP003086.1-201ENST00000513207 FANCD2Q9BXW9 1451 aa14.42□□□□□ -0.1
AP003086.1-201ENST00000513207 TRHP20396 242 aaPredicted RBP14.41□□□□□ -0.1
AP003086.1-201ENST00000513207 ZBTB22O15209 634 aa14.4□□□□□ -0.1
AP003086.1-201ENST00000513207 CUX1P39880 1505 aa14.39□□□□□ -0.11
AP003086.1-201ENST00000513207 ABCB7O75027 752 aa14.38□□□□□ -0.11
AP003086.1-201ENST00000513207 PDS5BQ9NTI5 1447 aa14.37□□□□□ -0.11
AP003086.1-201ENST00000513207 SLC4A2P04920 1241 aa14.37□□□□□ -0.11
AP003086.1-201ENST00000513207 CEP164Q9UPV0 1460 aa14.35□□□□□ -0.11
AP003086.1-201ENST00000513207 KIF21AQ7Z4S6 1674 aa14.32□□□□□ -0.12
AP003086.1-201ENST00000513207 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.32□□□□□ -0.12
AP003086.1-201ENST00000513207 HNRNPUL2Q1KMD3 747 aaKnown RBP14.32□□□□□ -0.12
AP003086.1-201ENST00000513207 DNMBPQ6XZF7 1577 aa14.31□□□□□ -0.12
AP003086.1-201ENST00000513207 EEA1Q15075 1411 aa14.31□□□□□ -0.12
AP003086.1-201ENST00000513207 FAM9AQ8IZU1 332 aaPredicted RBP14.29□□□□□ -0.12
AP003086.1-201ENST00000513207 SOGA1O94964 1423 aa14.29□□□□□ -0.12
AP003086.1-201ENST00000513207 TOPBP1Q92547 1522 aa14.26□□□□□ -0.13
AP003086.1-201ENST00000513207 RBM42Q9BTD8 480 aaKnown RBP14.25□□□□□ -0.13
AP003086.1-201ENST00000513207 FGD5Q6ZNL6 1462 aa14.24□□□□□ -0.13
AP003086.1-201ENST00000513207 URB2Q14146 1524 aaKnown RBP14.24□□□□□ -0.13
AP003086.1-201ENST00000513207 RUSC2Q8N2Y8 1516 aa14.22□□□□□ -0.13
AP003086.1-201ENST00000513207 LOC105371045A0A1W2PR82 267 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms