RNA–Protein interactions for RNA: ENST00000420987.5

SEMA4D-207, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,275 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-207ENST00000420987 NISCHQ9Y2I1 1504 aa19.06■□□□□ 0.64
SEMA4D-207ENST00000420987 DCAF8L2P0C7V8 631 aa16.67■□□□□ 0.26
SEMA4D-207ENST00000420987 CCDC180Q9P1Z9 1646 aa16.42■□□□□ 0.22
SEMA4D-207ENST00000420987 SHROOM4Q9ULL8 1493 aa16.08■□□□□ 0.17
SEMA4D-207ENST00000420987 ABCC9O60706 1549 aa16■□□□□ 0.15
SEMA4D-207ENST00000420987 ZCCHC6Q5VYS8 1495 aaKnown RBP15.93■□□□□ 0.14
SEMA4D-207ENST00000420987 SUPT5HO00267 1087 aaKnown RBP15.68■□□□□ 0.1
SEMA4D-207ENST00000420987 DCAF1Q9Y4B6 1507 aa15.6■□□□□ 0.09
SEMA4D-207ENST00000420987 NACADO15069 1562 aa15.5■□□□□ 0.07
SEMA4D-207ENST00000420987 PELP1Q8IZL8 1130 aaKnown RBP15.48■□□□□ 0.07
SEMA4D-207ENST00000420987 RB1CC1Q8TDY2 1594 aa15.45■□□□□ 0.06
SEMA4D-207ENST00000420987 MYO15BQ96JP2 1530 aa15.4■□□□□ 0.06
SEMA4D-207ENST00000420987 SCRIBQ14160 1630 aa15.38■□□□□ 0.05
SEMA4D-207ENST00000420987 MYT1Q01538 1121 aa15.29■□□□□ 0.04
SEMA4D-207ENST00000420987 PABPN1Q86U42 306 aaKnown RBP eCLIP15.26■□□□□ 0.03
SEMA4D-207ENST00000420987 PCGF6Q9BYE7 350 aa15.05■□□□□ -0
SEMA4D-207ENST00000420987 EHMT2Q96KQ7 1210 aa14.9□□□□□ -0.02
SEMA4D-207ENST00000420987 RSF1Q96T23 1441 aaPredicted RBP14.86□□□□□ -0.03
SEMA4D-207ENST00000420987 CECR2Q9BXF3 1484 aa14.83□□□□□ -0.04
SEMA4D-207ENST00000420987 BAZ1AQ9NRL2 1556 aaPredicted RBP14.8□□□□□ -0.04
SEMA4D-207ENST00000420987 PPARGC1BQ86YN6 1023 aaKnown RBP14.77□□□□□ -0.05
SEMA4D-207ENST00000420987 HRCP23327 699 aa14.75□□□□□ -0.05
SEMA4D-207ENST00000420987 TRIM41Q8WV44 630 aa14.72□□□□□ -0.05
SEMA4D-207ENST00000420987 MROH2BQ7Z745 1585 aa14.71□□□□□ -0.06
SEMA4D-207ENST00000420987 CHIC1Q5VXU3 224 aa14.67□□□□□ -0.06
SEMA4D-207ENST00000420987 BICRAQ9NZM4 1560 aa14.62□□□□□ -0.07
SEMA4D-207ENST00000420987 UNC13AQ9UPW8 1703 aa14.6□□□□□ -0.07
SEMA4D-207ENST00000420987 SMARCA4P51532 1647 aa14.59□□□□□ -0.07
SEMA4D-207ENST00000420987 FAM9AQ8IZU1 332 aaPredicted RBP14.59□□□□□ -0.07
SEMA4D-207ENST00000420987 BAZ1BQ9UIG0 1483 aaKnown RBP14.57□□□□□ -0.08
SEMA4D-207ENST00000420987 CENPBP07199 599 aaPredicted RBP14.55□□□□□ -0.08
SEMA4D-207ENST00000420987 WIZO95785 1651 aa14.53□□□□□ -0.08
SEMA4D-207ENST00000420987 SMARCA2P51531 1590 aa14.53□□□□□ -0.08
SEMA4D-207ENST00000420987 LOC105371045A0A1W2PR82 267 aa14.51□□□□□ -0.09
SEMA4D-207ENST00000420987 ERICH6Q7L0X2 663 aa14.48□□□□□ -0.09
SEMA4D-207ENST00000420987 ATAD2BQ9ULI0 1458 aa14.47□□□□□ -0.09
SEMA4D-207ENST00000420987 TOP2AP11388 1531 aaKnown RBP14.46□□□□□ -0.1
SEMA4D-207ENST00000420987 EIF4G1Q04637 1599 aaKnown RBP14.42□□□□□ -0.1
SEMA4D-207ENST00000420987 CCDC88BA6NC98 1476 aa14.38□□□□□ -0.11
SEMA4D-207ENST00000420987 TTBK1Q5TCY1 1321 aaPredicted RBP14.38□□□□□ -0.11
SEMA4D-207ENST00000420987 NCAPD3P42695 1498 aa14.32□□□□□ -0.12
SEMA4D-207ENST00000420987 YTHDC1Q96MU7 727 aaKnown RBP14.31□□□□□ -0.12
SEMA4D-207ENST00000420987 TRIM26Q12899 539 aaPredicted RBP14.26□□□□□ -0.13
SEMA4D-207ENST00000420987 PEG3Q9GZU2 1588 aa14.23□□□□□ -0.13
SEMA4D-207ENST00000420987 UBTFP17480 764 aaKnown RBP14.23□□□□□ -0.13
SEMA4D-207ENST00000420987 HMGXB3Q12766 1538 aa14.21□□□□□ -0.13
SEMA4D-207ENST00000420987 CC2D2AQ9P2K1 1620 aa14.2□□□□□ -0.14
SEMA4D-207ENST00000420987 WRNQ14191 1432 aaPredicted RBP eCLIP14.18□□□□□ -0.14
SEMA4D-207ENST00000420987 ZEB1P37275 1124 aaPredicted RBP14.17□□□□□ -0.14
SEMA4D-207ENST00000420987 CCER1Q8TC90 406 aaPredicted RBP14.15□□□□□ -0.14
SEMA4D-207ENST00000420987 CADPSQ9ULU8 1353 aa14.13□□□□□ -0.15
SEMA4D-207ENST00000420987 RANGAP1P46060 587 aaPredicted RBP14.12□□□□□ -0.15
SEMA4D-207ENST00000420987 CSRNP3Q8WYN3 585 aa14.1□□□□□ -0.15
SEMA4D-207ENST00000420987 ABCC8Q09428 1581 aa14.07□□□□□ -0.16
SEMA4D-207ENST00000420987 APLP2Q06481 763 aa14.05□□□□□ -0.16
SEMA4D-207ENST00000420987 PDS5BQ9NTI5 1447 aa14.03□□□□□ -0.16
SEMA4D-207ENST00000420987 EEA1Q15075 1411 aa14.02□□□□□ -0.17
SEMA4D-207ENST00000420987 CFTRP13569 1480 aa14□□□□□ -0.17
SEMA4D-207ENST00000420987 GTF3C3Q9Y5Q9 886 aa13.99□□□□□ -0.17
SEMA4D-207ENST00000420987 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.98□□□□□ -0.17
SEMA4D-207ENST00000420987 FANCD2Q9BXW9 1451 aa13.95□□□□□ -0.18
SEMA4D-207ENST00000420987 ERCC6Q03468 1493 aa13.93□□□□□ -0.18
SEMA4D-207ENST00000420987 DNAJC5BQ9UF47 199 aa13.93□□□□□ -0.18
SEMA4D-207ENST00000420987 KIF27Q86VH2 1401 aa13.92□□□□□ -0.18
SEMA4D-207ENST00000420987 CEP164Q9UPV0 1460 aa13.91□□□□□ -0.18
SEMA4D-207ENST00000420987 SOGA1O94964 1423 aa13.91□□□□□ -0.18
SEMA4D-207ENST00000420987 SCAF1Q9H7N4 1312 aaKnown RBP13.88□□□□□ -0.19
SEMA4D-207ENST00000420987 NESP48681 1621 aa13.86□□□□□ -0.19
SEMA4D-207ENST00000420987 NEFLP07196 543 aa13.85□□□□□ -0.19
SEMA4D-207ENST00000420987 CUX2O14529 1486 aa13.83□□□□□ -0.2
SEMA4D-207ENST00000420987 ATP1B4Q9UN42 357 aaPredicted RBP13.83□□□□□ -0.2
SEMA4D-207ENST00000420987 GOLGA3Q08378 1498 aa13.83□□□□□ -0.2
SEMA4D-207ENST00000420987 LAMC3Q9Y6N6 1575 aa13.82□□□□□ -0.2
SEMA4D-207ENST00000420987 DIEXFQ68CQ4 756 aaKnown RBP13.8□□□□□ -0.2
SEMA4D-207ENST00000420987 SYNJ1O43426 1573 aa13.8□□□□□ -0.2
SEMA4D-207ENST00000420987 FBLN2P98095 1184 aa13.77□□□□□ -0.21
SEMA4D-207ENST00000420987 TOP2BQ02880 1626 aa13.76□□□□□ -0.21
SEMA4D-207ENST00000420987 FGD5Q6ZNL6 1462 aa13.75□□□□□ -0.21
SEMA4D-207ENST00000420987 TNIKQ9UKE5 1360 aa13.75□□□□□ -0.21
SEMA4D-207ENST00000420987 CUX1P39880 1505 aa13.74□□□□□ -0.21
SEMA4D-207ENST00000420987 RUSC2Q8N2Y8 1516 aa13.73□□□□□ -0.21
SEMA4D-207ENST00000420987 ACIN1Q9UKV3 1341 aaKnown RBP13.72□□□□□ -0.21
SEMA4D-207ENST00000420987 CARMIL1Q5VZK9 1371 aa13.72□□□□□ -0.21
SEMA4D-207ENST00000420987 EIF5BO60841 1220 aaKnown RBP13.71□□□□□ -0.22
SEMA4D-207ENST00000420987 NEUROD1Q13562 356 aa13.71□□□□□ -0.22
SEMA4D-207ENST00000420987 TDRD9Q8NDG6 1382 aaKnown RBP13.7□□□□□ -0.22
SEMA4D-207ENST00000420987 CEP162Q5TB80 1403 aa13.69□□□□□ -0.22
SEMA4D-207ENST00000420987 TOPBP1Q92547 1522 aa13.69□□□□□ -0.22
SEMA4D-207ENST00000420987 CLIP1P30622 1438 aa13.68□□□□□ -0.22
SEMA4D-207ENST00000420987 DNMBPQ6XZF7 1577 aa13.68□□□□□ -0.22
SEMA4D-207ENST00000420987 MRC2Q9UBG0 1479 aa13.67□□□□□ -0.22
SEMA4D-207ENST00000420987 BCL11AQ9H165 835 aa13.67□□□□□ -0.22
SEMA4D-207ENST00000420987 RAD54L2Q9Y4B4 1467 aa13.66□□□□□ -0.22
SEMA4D-207ENST00000420987 CHMP7Q8WUX9 453 aaPredicted RBP13.66□□□□□ -0.22
SEMA4D-207ENST00000420987 HNRNPUL2Q1KMD3 747 aaKnown RBP13.66□□□□□ -0.22
SEMA4D-207ENST00000420987 P3H3Q8IVL6 736 aa13.64□□□□□ -0.23
SEMA4D-207ENST00000420987 POLA1P09884 1462 aaPredicted RBP13.63□□□□□ -0.23
SEMA4D-207ENST00000420987 BIVM-ERCC5R4GMW8 1640 aa13.63□□□□□ -0.23
SEMA4D-207ENST00000420987 RTL5Q5HYW3 569 aaPredicted RBP13.62□□□□□ -0.23
SEMA4D-207ENST00000420987 IGF1RP08069 1367 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms