RNA–Protein interactions for RNA: ENST00000401000.8

RPRD2-203, Transcript of regulation of nuclear pre-mRNA domain containing 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RPRD2, Length 7,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD2-203ENST00000401000 DCAF8L2P0C7V8 631 aa16.9■□□□□ 0.3
RPRD2-203ENST00000401000 SUPT5HO00267 1087 aaKnown RBP16.17■□□□□ 0.18
RPRD2-203ENST00000401000 PELP1Q8IZL8 1130 aaKnown RBP16.11■□□□□ 0.17
RPRD2-203ENST00000401000 EHMT2Q96KQ7 1210 aa15.99■□□□□ 0.15
RPRD2-203ENST00000401000 SHROOM4Q9ULL8 1493 aa15.8■□□□□ 0.12
RPRD2-203ENST00000401000 ERICH6Q7L0X2 663 aa15.6■□□□□ 0.09
RPRD2-203ENST00000401000 APLP2Q06481 763 aa15.56■□□□□ 0.08
RPRD2-203ENST00000401000 TTBK1Q5TCY1 1321 aaPredicted RBP15.5■□□□□ 0.07
RPRD2-203ENST00000401000 PCGF6Q9BYE7 350 aa15.43■□□□□ 0.06
RPRD2-203ENST00000401000 CCER1Q8TC90 406 aaPredicted RBP15.39■□□□□ 0.05
RPRD2-203ENST00000401000 CENPBP07199 599 aaPredicted RBP15.39■□□□□ 0.05
RPRD2-203ENST00000401000 FAM9AQ8IZU1 332 aaPredicted RBP15.35■□□□□ 0.05
RPRD2-203ENST00000401000 NISCHQ9Y2I1 1504 aa15.34■□□□□ 0.05
RPRD2-203ENST00000401000 RANGAP1P46060 587 aaPredicted RBP15.17■□□□□ 0.02
RPRD2-203ENST00000401000 ZEB1P37275 1124 aaPredicted RBP15.17■□□□□ 0.02
RPRD2-203ENST00000401000 MYT1Q01538 1121 aa15.15■□□□□ 0.02
RPRD2-203ENST00000401000 YTHDC1Q96MU7 727 aaKnown RBP15.14■□□□□ 0.01
RPRD2-203ENST00000401000 NEFLP07196 543 aa15.1■□□□□ 0.01
RPRD2-203ENST00000401000 ATP1B4Q9UN42 357 aaPredicted RBP15.05■□□□□ -0
RPRD2-203ENST00000401000 TRIM41Q8WV44 630 aa14.9□□□□□ -0.02
RPRD2-203ENST00000401000 UBTFP17480 764 aaKnown RBP14.83□□□□□ -0.04
RPRD2-203ENST00000401000 DAXXQ9UER7 740 aaPredicted RBP14.8□□□□□ -0.04
RPRD2-203ENST00000401000 PPARGC1BQ86YN6 1023 aaKnown RBP14.8□□□□□ -0.04
RPRD2-203ENST00000401000 POLR3GLQ9BT43 218 aa14.63□□□□□ -0.07
RPRD2-203ENST00000401000 TRIM26Q12899 539 aaPredicted RBP14.6□□□□□ -0.07
RPRD2-203ENST00000401000 HRCP23327 699 aa14.57□□□□□ -0.08
RPRD2-203ENST00000401000 CNGB1Q14028 1251 aaPredicted RBP14.54□□□□□ -0.08
RPRD2-203ENST00000401000 ITGAEP38570 1179 aa14.53□□□□□ -0.08
RPRD2-203ENST00000401000 ZNF316A6NFI3 1004 aaPredicted RBP14.47□□□□□ -0.09
RPRD2-203ENST00000401000 RTL5Q5HYW3 569 aaPredicted RBP14.46□□□□□ -0.09
RPRD2-203ENST00000401000 MYT1LQ9UL68 1186 aa14.44□□□□□ -0.1
RPRD2-203ENST00000401000 HNRNPUL2Q1KMD3 747 aaKnown RBP14.38□□□□□ -0.11
RPRD2-203ENST00000401000 CLSPNQ9HAW4 1339 aa14.37□□□□□ -0.11
RPRD2-203ENST00000401000 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.35□□□□□ -0.11
RPRD2-203ENST00000401000 SLC4A1APQ9BWU0 796 aaKnown RBP14.35□□□□□ -0.11
RPRD2-203ENST00000401000 CHIC1Q5VXU3 224 aa14.32□□□□□ -0.12
RPRD2-203ENST00000401000 LOC105371045A0A1W2PR82 267 aa14.31□□□□□ -0.12
RPRD2-203ENST00000401000 DIEXFQ68CQ4 756 aaKnown RBP14.3□□□□□ -0.12
RPRD2-203ENST00000401000 BCANQ96GW7 911 aa14.23□□□□□ -0.13
RPRD2-203ENST00000401000 GTF3C3Q9Y5Q9 886 aa14.15□□□□□ -0.14
RPRD2-203ENST00000401000 CDK11AQ9UQ88 783 aaPredicted RBP14.11□□□□□ -0.15
RPRD2-203ENST00000401000 FAM50AQ14320 339 aaKnown RBP14.08□□□□□ -0.16
RPRD2-203ENST00000401000 NEUROD1Q13562 356 aa14.08□□□□□ -0.16
RPRD2-203ENST00000401000 TRIM52Q96A61 297 aa14.03□□□□□ -0.16
RPRD2-203ENST00000401000 BCL11AQ9H165 835 aa14.01□□□□□ -0.17
RPRD2-203ENST00000401000 ZBTB47Q9UFB7 747 aaPredicted RBP14□□□□□ -0.17
RPRD2-203ENST00000401000 ANP32CO43423 234 aa14□□□□□ -0.17
RPRD2-203ENST00000401000 CANXP27824 592 aaKnown RBP13.94□□□□□ -0.18
RPRD2-203ENST00000401000 ZNF326Q5BKZ1 582 aaKnown RBP13.93□□□□□ -0.18
RPRD2-203ENST00000401000 SLC24A1O60721 1099 aa13.91□□□□□ -0.18
RPRD2-203ENST00000401000 ANP32AP39687 249 aaKnown RBP13.89□□□□□ -0.19
RPRD2-203ENST00000401000 NPM2Q86SE8 214 aaKnown RBP13.89□□□□□ -0.19
RPRD2-203ENST00000401000 EIF5BO60841 1220 aaKnown RBP13.88□□□□□ -0.19
RPRD2-203ENST00000401000 ACIN1Q9UKV3 1341 aaKnown RBP13.82□□□□□ -0.2
RPRD2-203ENST00000401000 ANP32BQ92688 251 aaKnown RBP13.75□□□□□ -0.21
RPRD2-203ENST00000401000 NEFMP07197 916 aa13.72□□□□□ -0.21
RPRD2-203ENST00000401000 FKBP8Q14318 412 aa13.71□□□□□ -0.21
RPRD2-203ENST00000401000 HSP90AA1P07900 732 aaKnown RBP13.69□□□□□ -0.22
RPRD2-203ENST00000401000 GLIPR1L2Q4G1C9 344 aa13.67□□□□□ -0.22
RPRD2-203ENST00000401000 NBR1Q14596 966 aa13.66□□□□□ -0.22
RPRD2-203ENST00000401000 ARXQ96QS3 562 aa13.62□□□□□ -0.23
RPRD2-203ENST00000401000 UPF2Q9HAU5 1272 aaKnown RBP13.6□□□□□ -0.23
RPRD2-203ENST00000401000 ARID3CA6NKF2 412 aa13.57□□□□□ -0.24
RPRD2-203ENST00000401000 FBLN2P98095 1184 aa13.55□□□□□ -0.24
RPRD2-203ENST00000401000 HNRNPUQ00839 825 aaKnown RBP eCLIP13.55□□□□□ -0.24
RPRD2-203ENST00000401000 P3H3Q8IVL6 736 aa13.55□□□□□ -0.24
RPRD2-203ENST00000401000 FAM9BQ8IZU0 186 aa13.55□□□□□ -0.24
RPRD2-203ENST00000401000 SALL2Q9Y467 1007 aaPredicted RBP13.54□□□□□ -0.24
RPRD2-203ENST00000401000 ZNF777Q9ULD5 760 aaPredicted RBP13.5□□□□□ -0.25
RPRD2-203ENST00000401000 CCDC136Q96JN2 1154 aa13.48□□□□□ -0.25
RPRD2-203ENST00000401000 PABPN1Q86U42 306 aaKnown RBP eCLIP13.47□□□□□ -0.25
RPRD2-203ENST00000401000 DDX10Q13206 875 aaKnown RBP13.47□□□□□ -0.25
RPRD2-203ENST00000401000 TONSLQ96HA7 1378 aa13.45□□□□□ -0.26
RPRD2-203ENST00000401000 IRX6P78412 446 aaPredicted RBP13.42□□□□□ -0.26
RPRD2-203ENST00000401000 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.4□□□□□ -0.26
RPRD2-203ENST00000401000 CHGAP10645 457 aaKnown RBP13.4□□□□□ -0.27
RPRD2-203ENST00000401000 TMC1Q8TDI8 760 aa13.38□□□□□ -0.27
RPRD2-203ENST00000401000 SCAF1Q9H7N4 1312 aaKnown RBP13.38□□□□□ -0.27
RPRD2-203ENST00000401000 WDR43Q15061 677 aaKnown RBP eCLIP13.35□□□□□ -0.27
RPRD2-203ENST00000401000 STAG3Q9UJ98 1225 aa13.34□□□□□ -0.27
RPRD2-203ENST00000401000 PLPPR3Q6T4P5 718 aa13.34□□□□□ -0.27
RPRD2-203ENST00000401000 TRIM44Q96DX7 344 aaPredicted RBP13.32□□□□□ -0.28
RPRD2-203ENST00000401000 ABCC9O60706 1549 aa13.32□□□□□ -0.28
RPRD2-203ENST00000401000 CSRNP3Q8WYN3 585 aa13.3□□□□□ -0.28
RPRD2-203ENST00000401000 CDK11BP21127 795 aaKnown RBP13.3□□□□□ -0.28
RPRD2-203ENST00000401000 ESF1Q9H501 851 aaKnown RBP13.3□□□□□ -0.28
RPRD2-203ENST00000401000 MRS2Q9HD23 443 aa13.3□□□□□ -0.28
RPRD2-203ENST00000401000 DDRGK1Q96HY6 314 aa13.29□□□□□ -0.28
RPRD2-203ENST00000401000 MYH16Q9H6N6 1097 aa13.28□□□□□ -0.28
RPRD2-203ENST00000401000 MIER1Q8N108 512 aa13.27□□□□□ -0.28
RPRD2-203ENST00000401000 BECN1Q14457 450 aa13.27□□□□□ -0.29
RPRD2-203ENST00000401000 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.25□□□□□ -0.293e-8■□□□□ 8.7
RPRD2-203ENST00000401000 HIRIP3Q9BW71 556 aaPredicted RBP13.25□□□□□ -0.29
RPRD2-203ENST00000401000 NCLP19338 710 aaKnown RBP13.25□□□□□ -0.29
RPRD2-203ENST00000401000 KDM2AQ9Y2K7 1162 aa13.25□□□□□ -0.29
RPRD2-203ENST00000401000 CHIC2Q9UKJ5 165 aa13.25□□□□□ -0.29
RPRD2-203ENST00000401000 DCAF1Q9Y4B6 1507 aa13.24□□□□□ -0.29
RPRD2-203ENST00000401000 TNNT2P45379 298 aaPredicted RBP13.23□□□□□ -0.29
RPRD2-203ENST00000401000 TPRNQ4KMQ1 711 aa13.22□□□□□ -0.29
RPRD2-203ENST00000401000 PTMAP06454 111 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms