Protein–RNA interactions for Protein: Q8WW43

APH1B, Gamma-secretase subunit APH-1B, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1BQ8WW43 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
APH1BQ8WW43 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.5■□□□□ 0.55
APH1BQ8WW43 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.5■□□□□ 0.55
APH1BQ8WW43 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
APH1BQ8WW43 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.5■□□□□ 0.55
APH1BQ8WW43 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
APH1BQ8WW43 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
APH1BQ8WW43 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
APH1BQ8WW43 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
APH1BQ8WW43 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
APH1BQ8WW43 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.5■□□□□ 0.55
APH1BQ8WW43 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
APH1BQ8WW43 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
APH1BQ8WW43 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.5■□□□□ 0.55
APH1BQ8WW43 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.5■□□□□ 0.55
APH1BQ8WW43 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.5■□□□□ 0.55
APH1BQ8WW43 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
APH1BQ8WW43 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
APH1BQ8WW43 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.5■□□□□ 0.55
APH1BQ8WW43 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.5■□□□□ 0.55
APH1BQ8WW43 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.5■□□□□ 0.55
APH1BQ8WW43 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
APH1BQ8WW43 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
APH1BQ8WW43 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
APH1BQ8WW43 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.49■□□□□ 0.55
APH1BQ8WW43 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.49■□□□□ 0.55
APH1BQ8WW43 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
APH1BQ8WW43 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
APH1BQ8WW43 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.49■□□□□ 0.55
APH1BQ8WW43 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
APH1BQ8WW43 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
APH1BQ8WW43 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.49■□□□□ 0.55
APH1BQ8WW43 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
APH1BQ8WW43 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.49■□□□□ 0.55
APH1BQ8WW43 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
APH1BQ8WW43 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.49■□□□□ 0.55
APH1BQ8WW43 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
APH1BQ8WW43 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.49■□□□□ 0.55
APH1BQ8WW43 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.49■□□□□ 0.55
APH1BQ8WW43 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
APH1BQ8WW43 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
APH1BQ8WW43 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
APH1BQ8WW43 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
APH1BQ8WW43 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
APH1BQ8WW43 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
APH1BQ8WW43 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
APH1BQ8WW43 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
APH1BQ8WW43 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
APH1BQ8WW43 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
APH1BQ8WW43 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.49■□□□□ 0.55
APH1BQ8WW43 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
APH1BQ8WW43 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.48■□□□□ 0.55
APH1BQ8WW43 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
APH1BQ8WW43 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
APH1BQ8WW43 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
APH1BQ8WW43 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.48■□□□□ 0.55
APH1BQ8WW43 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
APH1BQ8WW43 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
APH1BQ8WW43 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
APH1BQ8WW43 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
APH1BQ8WW43 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
APH1BQ8WW43 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
APH1BQ8WW43 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.48■□□□□ 0.55
APH1BQ8WW43 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.47■□□□□ 0.55
APH1BQ8WW43 AC005224.4-201ENST00000583262 1652 ntBASIC18.47■□□□□ 0.55
APH1BQ8WW43 AC061975.6-201ENST00000579045 1553 ntBASIC18.47■□□□□ 0.55
APH1BQ8WW43 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.47■□□□□ 0.55
APH1BQ8WW43 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.47■□□□□ 0.55
APH1BQ8WW43 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
APH1BQ8WW43 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
APH1BQ8WW43 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
APH1BQ8WW43 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.47■□□□□ 0.55
APH1BQ8WW43 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.47■□□□□ 0.55
APH1BQ8WW43 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.47■□□□□ 0.55
APH1BQ8WW43 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.47■□□□□ 0.55
APH1BQ8WW43 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
APH1BQ8WW43 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
APH1BQ8WW43 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
APH1BQ8WW43 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.47■□□□□ 0.55
APH1BQ8WW43 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
APH1BQ8WW43 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
APH1BQ8WW43 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
APH1BQ8WW43 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
APH1BQ8WW43 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.47■□□□□ 0.55
APH1BQ8WW43 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.46■□□□□ 0.55
APH1BQ8WW43 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
APH1BQ8WW43 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
APH1BQ8WW43 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
APH1BQ8WW43 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
APH1BQ8WW43 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
APH1BQ8WW43 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
APH1BQ8WW43 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
APH1BQ8WW43 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.46■□□□□ 0.55
APH1BQ8WW43 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
APH1BQ8WW43 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
APH1BQ8WW43 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
APH1BQ8WW43 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
APH1BQ8WW43 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
APH1BQ8WW43 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.46■□□□□ 0.55
APH1BQ8WW43 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms