Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC12.74□□□□□ -0.37
VPS13BQ7Z7G8 AC026471.5-201ENST00000615068 467 ntBASIC12.74□□□□□ -0.37
VPS13BQ7Z7G8 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VPS13BQ7Z7G8 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS13BQ7Z7G8 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS13BQ7Z7G8 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS13BQ7Z7G8 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VPS13BQ7Z7G8 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS13BQ7Z7G8 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS13BQ7Z7G8 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS13BQ7Z7G8 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
VPS13BQ7Z7G8 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC12.74□□□□□ -0.37
VPS13BQ7Z7G8 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS13BQ7Z7G8 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS13BQ7Z7G8 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
VPS13BQ7Z7G8 SRI-203ENST00000419179 1307 ntTSL 2 BASIC12.74□□□□□ -0.37
VPS13BQ7Z7G8 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS13BQ7Z7G8 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VPS13BQ7Z7G8 KRT18P57-201ENST00000443599 1254 ntBASIC12.74□□□□□ -0.37
VPS13BQ7Z7G8 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC12.74□□□□□ -0.37
VPS13BQ7Z7G8 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
VPS13BQ7Z7G8 AC073508.3-201ENST00000619697 1419 ntBASIC12.74□□□□□ -0.37
VPS13BQ7Z7G8 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC12.74□□□□□ -0.37
VPS13BQ7Z7G8 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS13BQ7Z7G8 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS13BQ7Z7G8 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13BQ7Z7G8 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13BQ7Z7G8 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13BQ7Z7G8 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC12.73□□□□□ -0.37
VPS13BQ7Z7G8 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC12.73□□□□□ -0.37
VPS13BQ7Z7G8 DUT-205ENST00000558813 769 ntTSL 2 BASIC12.73□□□□□ -0.37
VPS13BQ7Z7G8 FAM99A-202ENST00000538190 1989 ntBASIC12.73□□□□□ -0.37
VPS13BQ7Z7G8 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13BQ7Z7G8 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13BQ7Z7G8 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13BQ7Z7G8 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13BQ7Z7G8 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13BQ7Z7G8 AC007322.3-201ENST00000426526 701 ntBASIC12.73□□□□□ -0.37
VPS13BQ7Z7G8 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC12.73□□□□□ -0.37
VPS13BQ7Z7G8 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13BQ7Z7G8 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13BQ7Z7G8 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13BQ7Z7G8 GGT1-206ENST00000404223 952 ntTSL 2 BASIC12.73□□□□□ -0.37
VPS13BQ7Z7G8 AC091799.1-201ENST00000422823 811 ntBASIC12.73□□□□□ -0.37
VPS13BQ7Z7G8 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13BQ7Z7G8 CFL2-205ENST00000555765 632 ntTSL 2 BASIC12.73□□□□□ -0.37
VPS13BQ7Z7G8 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC12.73□□□□□ -0.37
VPS13BQ7Z7G8 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13BQ7Z7G8 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13BQ7Z7G8 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13BQ7Z7G8 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13BQ7Z7G8 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13BQ7Z7G8 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13BQ7Z7G8 AC005521.1-201ENST00000393351 872 ntBASIC12.72□□□□□ -0.37
VPS13BQ7Z7G8 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC12.72□□□□□ -0.37
VPS13BQ7Z7G8 P4HB-223ENST00000576390 439 ntTSL 4 BASIC12.72□□□□□ -0.37
VPS13BQ7Z7G8 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC12.72□□□□□ -0.37
VPS13BQ7Z7G8 AL121894.2-201ENST00000602977 491 ntBASIC12.72□□□□□ -0.37
VPS13BQ7Z7G8 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13BQ7Z7G8 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC12.72□□□□□ -0.37
VPS13BQ7Z7G8 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13BQ7Z7G8 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13BQ7Z7G8 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC12.72□□□□□ -0.37
VPS13BQ7Z7G8 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC12.72□□□□□ -0.37
VPS13BQ7Z7G8 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC12.72□□□□□ -0.37
VPS13BQ7Z7G8 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC12.72□□□□□ -0.37
VPS13BQ7Z7G8 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13BQ7Z7G8 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
VPS13BQ7Z7G8 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13BQ7Z7G8 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC12.72□□□□□ -0.37
VPS13BQ7Z7G8 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13BQ7Z7G8 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13BQ7Z7G8 AP003071.4-201ENST00000562276 1284 ntBASIC12.72□□□□□ -0.37
VPS13BQ7Z7G8 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13BQ7Z7G8 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC12.72□□□□□ -0.37
VPS13BQ7Z7G8 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13BQ7Z7G8 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13BQ7Z7G8 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13BQ7Z7G8 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13BQ7Z7G8 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13BQ7Z7G8 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13BQ7Z7G8 SAPCD2P1-201ENST00000395413 1184 ntBASIC12.72□□□□□ -0.37
VPS13BQ7Z7G8 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13BQ7Z7G8 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC12.72□□□□□ -0.37
VPS13BQ7Z7G8 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13BQ7Z7G8 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13BQ7Z7G8 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC12.72□□□□□ -0.37
VPS13BQ7Z7G8 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13BQ7Z7G8 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
VPS13BQ7Z7G8 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
VPS13BQ7Z7G8 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
VPS13BQ7Z7G8 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VPS13BQ7Z7G8 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
VPS13BQ7Z7G8 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
VPS13BQ7Z7G8 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
VPS13BQ7Z7G8 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
VPS13BQ7Z7G8 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
VPS13BQ7Z7G8 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
VPS13BQ7Z7G8 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
VPS13BQ7Z7G8 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 238.2 ms