Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTL4Q6ZR62 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTL4Q6ZR62 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RTL4Q6ZR62 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RTL4Q6ZR62 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RTL4Q6ZR62 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTL4Q6ZR62 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTL4Q6ZR62 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
RTL4Q6ZR62 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.12■□□□□ 0.65
RTL4Q6ZR62 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
RTL4Q6ZR62 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.12■□□□□ 0.65
RTL4Q6ZR62 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTL4Q6ZR62 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTL4Q6ZR62 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RTL4Q6ZR62 SLC29A4P1-201ENST00000398760 971 ntBASIC19.12■□□□□ 0.65
RTL4Q6ZR62 TSPY6P-201ENST00000448518 926 ntBASIC19.12■□□□□ 0.65
RTL4Q6ZR62 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.12■□□□□ 0.65
RTL4Q6ZR62 AC105036.2-201ENST00000569468 176 ntBASIC19.12■□□□□ 0.65
RTL4Q6ZR62 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.12■□□□□ 0.65
RTL4Q6ZR62 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RTL4Q6ZR62 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RTL4Q6ZR62 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTL4Q6ZR62 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.11■□□□□ 0.65
RTL4Q6ZR62 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTL4Q6ZR62 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RTL4Q6ZR62 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTL4Q6ZR62 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTL4Q6ZR62 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTL4Q6ZR62 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.11■□□□□ 0.65
RTL4Q6ZR62 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTL4Q6ZR62 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTL4Q6ZR62 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.11■□□□□ 0.65
RTL4Q6ZR62 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.11■□□□□ 0.65
RTL4Q6ZR62 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RTL4Q6ZR62 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
RTL4Q6ZR62 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RTL4Q6ZR62 AL355802.2-201ENST00000402069 882 ntBASIC19.11■□□□□ 0.65
RTL4Q6ZR62 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RTL4Q6ZR62 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RTL4Q6ZR62 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.11■□□□□ 0.65
RTL4Q6ZR62 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.11■□□□□ 0.65
RTL4Q6ZR62 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.11■□□□□ 0.65
RTL4Q6ZR62 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.11■□□□□ 0.65
RTL4Q6ZR62 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTL4Q6ZR62 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTL4Q6ZR62 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTL4Q6ZR62 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
RTL4Q6ZR62 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTL4Q6ZR62 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
RTL4Q6ZR62 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTL4Q6ZR62 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTL4Q6ZR62 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RTL4Q6ZR62 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RTL4Q6ZR62 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RTL4Q6ZR62 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTL4Q6ZR62 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTL4Q6ZR62 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
RTL4Q6ZR62 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.1■□□□□ 0.65
RTL4Q6ZR62 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.1■□□□□ 0.65
RTL4Q6ZR62 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTL4Q6ZR62 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.1■□□□□ 0.65
RTL4Q6ZR62 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.1■□□□□ 0.65
RTL4Q6ZR62 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTL4Q6ZR62 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.1■□□□□ 0.65
RTL4Q6ZR62 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
RTL4Q6ZR62 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.1■□□□□ 0.65
RTL4Q6ZR62 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.1■□□□□ 0.65
RTL4Q6ZR62 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
RTL4Q6ZR62 AL049796.1-201ENST00000565336 1766 ntBASIC19.1■□□□□ 0.65
RTL4Q6ZR62 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTL4Q6ZR62 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RTL4Q6ZR62 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTL4Q6ZR62 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RTL4Q6ZR62 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RTL4Q6ZR62 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTL4Q6ZR62 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTL4Q6ZR62 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTL4Q6ZR62 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RTL4Q6ZR62 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTL4Q6ZR62 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTL4Q6ZR62 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RTL4Q6ZR62 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTL4Q6ZR62 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
RTL4Q6ZR62 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RTL4Q6ZR62 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.09■□□□□ 0.65
RTL4Q6ZR62 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTL4Q6ZR62 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.09■□□□□ 0.65
RTL4Q6ZR62 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTL4Q6ZR62 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTL4Q6ZR62 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.09■□□□□ 0.65
RTL4Q6ZR62 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.09■□□□□ 0.65
RTL4Q6ZR62 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.09■□□□□ 0.65
RTL4Q6ZR62 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
RTL4Q6ZR62 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
RTL4Q6ZR62 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTL4Q6ZR62 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
RTL4Q6ZR62 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RTL4Q6ZR62 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.09■□□□□ 0.65
RTL4Q6ZR62 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.09■□□□□ 0.65
RTL4Q6ZR62 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms