Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCAF4O95104 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SCAF4O95104 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCAF4O95104 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCAF4O95104 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCAF4O95104 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.69■□□□□ 0.26
SCAF4O95104 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
SCAF4O95104 NARF-205ENST00000412079 1760 ntTSL 5 BASIC16.69■□□□□ 0.26
SCAF4O95104 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCAF4O95104 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCAF4O95104 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCAF4O95104 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCAF4O95104 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SCAF4O95104 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.68■□□□□ 0.26
SCAF4O95104 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCAF4O95104 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCAF4O95104 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCAF4O95104 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SCAF4O95104 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC16.68■□□□□ 0.26
SCAF4O95104 AC121338.2-201ENST00000622535 1744 ntBASIC16.68■□□□□ 0.26
SCAF4O95104 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
SCAF4O95104 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SCAF4O95104 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCAF4O95104 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC16.68■□□□□ 0.26
SCAF4O95104 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SCAF4O95104 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SCAF4O95104 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCAF4O95104 MIR638-201ENST00000385237 100 ntBASIC16.68■□□□□ 0.26
SCAF4O95104 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SCAF4O95104 GRAMD4P4-201ENST00000613563 1115 ntBASIC16.68■□□□□ 0.26
SCAF4O95104 AC136469.2-201ENST00000623944 1028 ntBASIC16.68■□□□□ 0.26
SCAF4O95104 AP006587.3-201ENST00000525742 1516 ntBASIC16.68■□□□□ 0.26
SCAF4O95104 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCAF4O95104 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCAF4O95104 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SCAF4O95104 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCAF4O95104 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
SCAF4O95104 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
SCAF4O95104 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SCAF4O95104 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCAF4O95104 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SCAF4O95104 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCAF4O95104 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC16.67■□□□□ 0.26
SCAF4O95104 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.67■□□□□ 0.26
SCAF4O95104 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SCAF4O95104 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.67■□□□□ 0.26
SCAF4O95104 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SCAF4O95104 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SCAF4O95104 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SCAF4O95104 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SCAF4O95104 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SCAF4O95104 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC16.67■□□□□ 0.26
SCAF4O95104 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SCAF4O95104 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
SCAF4O95104 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SCAF4O95104 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
SCAF4O95104 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC16.67■□□□□ 0.26
SCAF4O95104 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC16.67■□□□□ 0.26
SCAF4O95104 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SCAF4O95104 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SCAF4O95104 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SCAF4O95104 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SCAF4O95104 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SCAF4O95104 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SCAF4O95104 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SCAF4O95104 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SCAF4O95104 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SCAF4O95104 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.67■□□□□ 0.26
SCAF4O95104 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SCAF4O95104 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SCAF4O95104 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.67■□□□□ 0.26
SCAF4O95104 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SCAF4O95104 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SCAF4O95104 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
SCAF4O95104 SMG8-203ENST00000578922 2178 ntBASIC16.67■□□□□ 0.26
SCAF4O95104 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SCAF4O95104 AC018445.3-201ENST00000624177 1945 ntBASIC16.66■□□□□ 0.26
SCAF4O95104 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.66■□□□□ 0.26
SCAF4O95104 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SCAF4O95104 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SCAF4O95104 BID-204ENST00000399767 2129 ntTSL 2 BASIC16.66■□□□□ 0.26
SCAF4O95104 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SCAF4O95104 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SCAF4O95104 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SCAF4O95104 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SCAF4O95104 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SCAF4O95104 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.66■□□□□ 0.26
SCAF4O95104 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
SCAF4O95104 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC16.66■□□□□ 0.26
SCAF4O95104 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
SCAF4O95104 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SCAF4O95104 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC16.66■□□□□ 0.26
SCAF4O95104 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
SCAF4O95104 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SCAF4O95104 AC020907.5-201ENST00000624372 1936 ntBASIC16.66■□□□□ 0.26
SCAF4O95104 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SCAF4O95104 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SCAF4O95104 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
SCAF4O95104 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.65■□□□□ 0.26
SCAF4O95104 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms