Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SRRM4A7MD48 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SRRM4A7MD48 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC16.48■□□□□ 0.23
SRRM4A7MD48 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SRRM4A7MD48 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SRRM4A7MD48 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SRRM4A7MD48 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SRRM4A7MD48 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SRRM4A7MD48 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
SRRM4A7MD48 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SRRM4A7MD48 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
SRRM4A7MD48 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.48■□□□□ 0.23
SRRM4A7MD48 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SRRM4A7MD48 NTF6G-201ENST00000591094 616 ntBASIC16.48■□□□□ 0.23
SRRM4A7MD48 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.48■□□□□ 0.23
SRRM4A7MD48 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SRRM4A7MD48 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SRRM4A7MD48 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SRRM4A7MD48 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SRRM4A7MD48 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SRRM4A7MD48 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SRRM4A7MD48 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC16.48■□□□□ 0.23
SRRM4A7MD48 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SRRM4A7MD48 AL162377.1-201ENST00000618844 1793 ntBASIC16.48■□□□□ 0.23
SRRM4A7MD48 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SRRM4A7MD48 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SRRM4A7MD48 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.48■□□□□ 0.23
SRRM4A7MD48 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.48■□□□□ 0.23
SRRM4A7MD48 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SRRM4A7MD48 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SRRM4A7MD48 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
SRRM4A7MD48 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SRRM4A7MD48 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SRRM4A7MD48 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
SRRM4A7MD48 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SRRM4A7MD48 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SRRM4A7MD48 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SRRM4A7MD48 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SRRM4A7MD48 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC16.47■□□□□ 0.23
SRRM4A7MD48 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SRRM4A7MD48 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SRRM4A7MD48 AC034268.1-201ENST00000441047 882 ntBASIC16.47■□□□□ 0.23
SRRM4A7MD48 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC16.47■□□□□ 0.23
SRRM4A7MD48 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.47■□□□□ 0.23
SRRM4A7MD48 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC16.47■□□□□ 0.23
SRRM4A7MD48 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SRRM4A7MD48 UBE2DNL-204ENST00000602536 740 ntBASIC16.47■□□□□ 0.23
SRRM4A7MD48 AC087623.3-201ENST00000607047 1098 ntBASIC16.47■□□□□ 0.23
SRRM4A7MD48 MIR6821-201ENST00000617625 74 ntBASIC16.47■□□□□ 0.23
SRRM4A7MD48 TFG-210ENST00000620299 1289 ntTSL 5 BASIC16.47■□□□□ 0.23
SRRM4A7MD48 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC16.47■□□□□ 0.23
SRRM4A7MD48 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SRRM4A7MD48 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SRRM4A7MD48 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SRRM4A7MD48 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC16.47■□□□□ 0.23
SRRM4A7MD48 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SRRM4A7MD48 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SRRM4A7MD48 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SRRM4A7MD48 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SRRM4A7MD48 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SRRM4A7MD48 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SRRM4A7MD48 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SRRM4A7MD48 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
SRRM4A7MD48 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.46■□□□□ 0.23
SRRM4A7MD48 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SRRM4A7MD48 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC16.46■□□□□ 0.23
SRRM4A7MD48 PLD4-205ENST00000553861 667 ntTSL 2 BASIC16.46■□□□□ 0.23
SRRM4A7MD48 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.46■□□□□ 0.23
SRRM4A7MD48 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC16.46■□□□□ 0.23
SRRM4A7MD48 MIR2861-201ENST00000636310 90 ntBASIC16.46■□□□□ 0.23
SRRM4A7MD48 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SRRM4A7MD48 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.46■□□□□ 0.23
SRRM4A7MD48 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SRRM4A7MD48 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SRRM4A7MD48 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SRRM4A7MD48 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.46■□□□□ 0.23
SRRM4A7MD48 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SRRM4A7MD48 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
SRRM4A7MD48 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
SRRM4A7MD48 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRRM4A7MD48 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRRM4A7MD48 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRRM4A7MD48 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRRM4A7MD48 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.45■□□□□ 0.22
SRRM4A7MD48 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRRM4A7MD48 AC112907.3-201ENST00000577781 2400 ntBASIC16.45■□□□□ 0.22
SRRM4A7MD48 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
SRRM4A7MD48 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRRM4A7MD48 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SRRM4A7MD48 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC16.45■□□□□ 0.22
SRRM4A7MD48 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
SRRM4A7MD48 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRRM4A7MD48 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SRRM4A7MD48 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.45■□□□□ 0.22
SRRM4A7MD48 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRRM4A7MD48 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SRRM4A7MD48 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.45■□□□□ 0.22
SRRM4A7MD48 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRRM4A7MD48 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRRM4A7MD48 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms