Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV13-1A0A0B4J241 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
TRAV13-1A0A0B4J241 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV13-1A0A0B4J241 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV13-1A0A0B4J241 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV13-1A0A0B4J241 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV13-1A0A0B4J241 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV13-1A0A0B4J241 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV13-1A0A0B4J241 PTMA-205ENST00000410064 814 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV13-1A0A0B4J241 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC14.24□□□□□ -0.13
TRAV13-1A0A0B4J241 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV13-1A0A0B4J241 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TRAV13-1A0A0B4J241 FP700111.2-201ENST00000619190 1892 ntBASIC14.24□□□□□ -0.13
TRAV13-1A0A0B4J241 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV13-1A0A0B4J241 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV13-1A0A0B4J241 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV13-1A0A0B4J241 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
TRAV13-1A0A0B4J241 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV13-1A0A0B4J241 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV13-1A0A0B4J241 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV13-1A0A0B4J241 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TRAV13-1A0A0B4J241 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC14.24□□□□□ -0.13
TRAV13-1A0A0B4J241 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC14.24□□□□□ -0.13
TRAV13-1A0A0B4J241 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV13-1A0A0B4J241 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
TRAV13-1A0A0B4J241 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV13-1A0A0B4J241 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV13-1A0A0B4J241 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV13-1A0A0B4J241 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV13-1A0A0B4J241 AC020907.5-201ENST00000624372 1936 ntBASIC14.23□□□□□ -0.13
TRAV13-1A0A0B4J241 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV13-1A0A0B4J241 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV13-1A0A0B4J241 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
TRAV13-1A0A0B4J241 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV13-1A0A0B4J241 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV13-1A0A0B4J241 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV13-1A0A0B4J241 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TRAV13-1A0A0B4J241 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV13-1A0A0B4J241 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV13-1A0A0B4J241 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV13-1A0A0B4J241 HTR7P1-202ENST00000624664 4411 ntBASIC14.23□□□□□ -0.13
TRAV13-1A0A0B4J241 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV13-1A0A0B4J241 SNX3-202ENST00000349379 890 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV13-1A0A0B4J241 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV13-1A0A0B4J241 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV13-1A0A0B4J241 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV13-1A0A0B4J241 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
TRAV13-1A0A0B4J241 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV13-1A0A0B4J241 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV13-1A0A0B4J241 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV13-1A0A0B4J241 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV13-1A0A0B4J241 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV13-1A0A0B4J241 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV13-1A0A0B4J241 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV13-1A0A0B4J241 AC009237.3-201ENST00000393279 1427 ntBASIC14.23□□□□□ -0.13
TRAV13-1A0A0B4J241 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV13-1A0A0B4J241 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV13-1A0A0B4J241 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV13-1A0A0B4J241 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TRAV13-1A0A0B4J241 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
TRAV13-1A0A0B4J241 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TRAV13-1A0A0B4J241 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAV13-1A0A0B4J241 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TRAV13-1A0A0B4J241 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV13-1A0A0B4J241 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV13-1A0A0B4J241 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV13-1A0A0B4J241 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TRAV13-1A0A0B4J241 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV13-1A0A0B4J241 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV13-1A0A0B4J241 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV13-1A0A0B4J241 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV13-1A0A0B4J241 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TRAV13-1A0A0B4J241 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV13-1A0A0B4J241 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV13-1A0A0B4J241 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV13-1A0A0B4J241 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAV13-1A0A0B4J241 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV13-1A0A0B4J241 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV13-1A0A0B4J241 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV13-1A0A0B4J241 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TRAV13-1A0A0B4J241 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC14.22□□□□□ -0.13
TRAV13-1A0A0B4J241 AC126544.1-201ENST00000580842 1059 ntBASIC14.22□□□□□ -0.13
TRAV13-1A0A0B4J241 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV13-1A0A0B4J241 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC14.22□□□□□ -0.13
TRAV13-1A0A0B4J241 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV13-1A0A0B4J241 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV13-1A0A0B4J241 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
TRAV13-1A0A0B4J241 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV13-1A0A0B4J241 MCC-208ENST00000514701 2855 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV13-1A0A0B4J241 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV13-1A0A0B4J241 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV13-1A0A0B4J241 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TRAV13-1A0A0B4J241 AC112907.3-201ENST00000577781 2400 ntBASIC14.22□□□□□ -0.13
TRAV13-1A0A0B4J241 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV13-1A0A0B4J241 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV13-1A0A0B4J241 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV13-1A0A0B4J241 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TRAV13-1A0A0B4J241 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV13-1A0A0B4J241 RARG-204ENST00000543726 1779 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV13-1A0A0B4J241 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms