Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 FBXL13-206ENST00000448002 2582 ntTSL 1 (best)7.52□□□□□ -1.212e-6■■□□□ 14.4
PRPF8Q6P2Q9 FBXL13-202ENST00000379305 2478 ntTSL 1 (best) BASIC7.33□□□□□ -1.242e-6■■□□□ 14.4
PRPF8Q6P2Q9 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC5.4□□□□□ -1.542e-6■■□□□ 14.4
PRPF8Q6P2Q9 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.832e-6■■□□□ 14.4
PRPF8Q6P2Q9 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC3.09□□□□□ -1.912e-6■■□□□ 14.4
PRPF8Q6P2Q9 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.06□□□□□ -2.082e-6■■□□□ 14.4
PRPF8Q6P2Q9 HM13-222ENST00000494153 757 ntTSL 512.68□□□□□ -0.385e-9■■□□□ 14.4
PRPF8Q6P2Q9 HM13-206ENST00000460389 1075 ntTSL 512.51□□□□□ -0.415e-9■■□□□ 14.4
PRPF8Q6P2Q9 HM13-214ENST00000472128 865 ntTSL 58.68□□□□□ -1.025e-9■■□□□ 14.4
PRPF8Q6P2Q9 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.55□□□□□ -0.086e-7■■□□□ 14.4
PRPF8Q6P2Q9 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.03□□□□□ -0.486e-7■■□□□ 14.4
PRPF8Q6P2Q9 NDUFA4-206ENST00000492822 566 ntTSL 55.06□□□□□ -1.65e-6■■□□□ 14.4
PRPF8Q6P2Q9 NDUFA4-205ENST00000486007 434 ntTSL 24.85□□□□□ -1.635e-6■■□□□ 14.4
PRPF8Q6P2Q9 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.75e-6■■□□□ 14.4
PRPF8Q6P2Q9 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.156e-7■■□□□ 14.4
PRPF8Q6P2Q9 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC14.78□□□□□ -0.046e-7■■□□□ 14.4
PRPF8Q6P2Q9 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.146e-7■■□□□ 14.4
PRPF8Q6P2Q9 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC12.23□□□□□ -0.456e-7■■□□□ 14.4
PRPF8Q6P2Q9 SEC31A-231ENST00000510310 584 ntTSL 420.05■□□□□ 0.84e-8■■□□□ 14.4
PRPF8Q6P2Q9 KATNB1-205ENST00000563462 827 ntTSL 510.57□□□□□ -0.723e-6■■□□□ 14.4
PRPF8Q6P2Q9 TSC2-205ENST00000432909 374 ntTSL 315.33■□□□□ 0.052e-6■■□□□ 14.4
PRPF8Q6P2Q9 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.02■□□□□ 0.643e-12■■□□□ 14.4
PRPF8Q6P2Q9 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.72□□□□□ -0.213e-12■■□□□ 14.4
PRPF8Q6P2Q9 MYRF-204ENST00000536352 1067 ntTSL 515.28■□□□□ 0.042e-7■■□□□ 14.4
PRPF8Q6P2Q9 SRRT-201ENST00000423692 727 ntTSL 512.67□□□□□ -0.382e-9■■□□□ 14.4
PRPF8Q6P2Q9 TRPV1-207ENST00000572705 4166 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.073e-7■■□□□ 14.4
PRPF8Q6P2Q9 CCDC84-208ENST00000534656 588 ntTSL 211.99□□□□□ -0.498e-8■■□□□ 14.4
PRPF8Q6P2Q9 NELFCD-202ENST00000464363 764 ntTSL 215.03■□□□□ -03e-7■■□□□ 14.4
PRPF8Q6P2Q9 FKBP4-205ENST00000543037 727 ntTSL 26.8□□□□□ -1.321e-6■■□□□ 14.4
PRPF8Q6P2Q9 EPS8L2-211ENST00000527832 1597 ntTSL 217.88■□□□□ 0.453e-14■■□□□ 14.3
PRPF8Q6P2Q9 IKBKB-225ENST00000522785 527 ntTSL 414.64□□□□□ -0.072e-6■■□□□ 14.3
PRPF8Q6P2Q9 IKBKB-207ENST00000517917 1731 ntTSL 211.8□□□□□ -0.525e-7■■□□□ 14.3
PRPF8Q6P2Q9 IKBKB-227ENST00000523105 1966 ntTSL 210.15□□□□□ -0.785e-7■■□□□ 14.3
PRPF8Q6P2Q9 IKBKB-204ENST00000517502 498 ntTSL 38.27□□□□□ -1.092e-6■■□□□ 14.3
PRPF8Q6P2Q9 MARK4-208ENST00000592207 789 ntTSL 316.97■□□□□ 0.311e-6■■□□□ 14.3
PRPF8Q6P2Q9 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.046e-7■■□□□ 14.3
PRPF8Q6P2Q9 DCXR-205ENST00000577996 98 ntTSL 3-0.59□□□□□ -2.59e-15■■□□□ 14.3
PRPF8Q6P2Q9 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.581e-12■■□□□ 14.3
PRPF8Q6P2Q9 SERPINA1-220ENST00000636712 1485 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.711e-12■■□□□ 14.3
PRPF8Q6P2Q9 SERPINA1-205ENST00000404814 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.741e-12■■□□□ 14.3
PRPF8Q6P2Q9 SERPINA1-203ENST00000393088 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.791e-12■■□□□ 14.3
PRPF8Q6P2Q9 SERPINA1-202ENST00000393087 1622 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.891e-12■■□□□ 14.3
PRPF8Q6P2Q9 SERPINA1-208ENST00000448921 3532 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.31e-12■■□□□ 14.3
PRPF8Q6P2Q9 SERPINA1-201ENST00000355814 3236 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.321e-12■■□□□ 14.3
PRPF8Q6P2Q9 SERPINA1-207ENST00000440909 3144 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.351e-12■■□□□ 14.3
PRPF8Q6P2Q9 SERPINA1-206ENST00000437397 3340 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.381e-12■■□□□ 14.3
PRPF8Q6P2Q9 GPN2-203ENST00000431781 739 ntTSL 517.76■□□□□ 0.432e-6■■□□□ 14.3
PRPF8Q6P2Q9 CTBP1-204ENST00000503594 1108 ntTSL 217.1■□□□□ 0.332e-6■■□□□ 14.3
PRPF8Q6P2Q9 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.442e-6■■□□□ 14.3
PRPF8Q6P2Q9 GPN2-201ENST00000374133 715 ntTSL 3 BASIC7.13□□□□□ -1.272e-6■■□□□ 14.3
PRPF8Q6P2Q9 GPN2-205ENST00000477418 749 ntTSL 27.09□□□□□ -1.272e-6■■□□□ 14.3
PRPF8Q6P2Q9 SUCO-205ENST00000608566 756 ntTSL 26.05□□□□□ -1.442e-8■■□□□ 14.3
PRPF8Q6P2Q9 AJUBA-204ENST00000553592 418 ntTSL 56.34□□□□□ -1.392e-8■■□□□ 14.3
PRPF8Q6P2Q9 AJUBA-208ENST00000556731 651 ntTSL 46.34□□□□□ -1.392e-8■■□□□ 14.3
PRPF8Q6P2Q9 TJAP1-206ENST00000372454 581 ntTSL 512.84□□□□□ -0.359e-8■■□□□ 14.3
PRPF8Q6P2Q9 DPH7-208ENST00000476303 922 ntTSL 1 (best)13.8□□□□□ -0.25e-9■■□□□ 14.3
PRPF8Q6P2Q9 MAN2C1-215ENST00000563596 675 ntTSL 38.98□□□□□ -0.976e-8■■□□□ 14.3
PRPF8Q6P2Q9 SBF1-204ENST00000418590 1578 ntTSL 1 (best)12.79□□□□□ -0.362e-6■■□□□ 14.3
PRPF8Q6P2Q9 RNH1-221ENST00000532055 704 ntTSL 37.74□□□□□ -1.171e-6■■□□□ 14.3
PRPF8Q6P2Q9 GTF3C2-207ENST00000457098 762 ntTSL 38.31□□□□□ -1.086e-7■■□□□ 14.3
PRPF8Q6P2Q9 GTF3C2-203ENST00000415683 779 ntTSL 53.72□□□□□ -1.816e-7■■□□□ 14.3
PRPF8Q6P2Q9 PLXNB1-214ENST00000478171 576 ntTSL 314.14□□□□□ -0.154e-14■■□□□ 14.3
PRPF8Q6P2Q9 TCEA3-203ENST00000450454 1559 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.824e-6■■□□□ 14.3
PRPF8Q6P2Q9 RNF10-201ENST00000325954 3825 ntTSL 1 (best) BASIC9.08□□□□□ -0.962e-6■■□□□ 14.3
PRPF8Q6P2Q9 RNF10-203ENST00000413266 2671 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.032e-6■■□□□ 14.3
PRPF8Q6P2Q9 GREB1-209ENST00000472040 571 ntTSL 511.98□□□□□ -0.496e-8■■□□□ 14.3
PRPF8Q6P2Q9 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.579e-7■■□□□ 14.3
PRPF8Q6P2Q9 CDK16-201ENST00000276052 3016 ntTSL 2 BASIC10.51□□□□□ -0.739e-7■■□□□ 14.3
PRPF8Q6P2Q9 CDK16-203ENST00000428400 3016 ntTSL 29.26□□□□□ -0.939e-7■■□□□ 14.3
PRPF8Q6P2Q9 ZNF362-203ENST00000483388 712 ntTSL 219.66■□□□□ 0.742e-9■■□□□ 14.3
PRPF8Q6P2Q9 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.542e-9■■□□□ 14.3
PRPF8Q6P2Q9 MTFP1-204ENST00000412752 759 ntTSL 317.74■□□□□ 0.432e-9■■□□□ 14.3
PRPF8Q6P2Q9 DHX15-207ENST00000511553 532 ntTSL 417.55■□□□□ 0.42e-9■■□□□ 14.3
PRPF8Q6P2Q9 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.22■□□□□ 0.352e-9■■□□□ 14.3
PRPF8Q6P2Q9 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.322e-9■■□□□ 14.3
PRPF8Q6P2Q9 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.93■□□□□ 0.32e-9■■□□□ 14.3
PRPF8Q6P2Q9 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.252e-9■■□□□ 14.3
PRPF8Q6P2Q9 MTFP1-205ENST00000614920 648 ntTSL 216.58■□□□□ 0.252e-9■■□□□ 14.3
PRPF8Q6P2Q9 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.46■□□□□ 0.232e-9■■□□□ 14.3
PRPF8Q6P2Q9 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC15.85■□□□□ 0.131e-6■■□□□ 14.3
PRPF8Q6P2Q9 KCMF1-202ENST00000428691 560 ntTSL 215.83■□□□□ 0.122e-9■■□□□ 14.3
PRPF8Q6P2Q9 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.112e-9■■□□□ 14.3
PRPF8Q6P2Q9 FAM131A-206ENST00000433578 573 ntTSL 515.16■□□□□ 0.021e-6■■□□□ 14.3
PRPF8Q6P2Q9 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.13■□□□□ 0.012e-9■■□□□ 14.3
PRPF8Q6P2Q9 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.032e-9■■□□□ 14.3
PRPF8Q6P2Q9 FBXL19-209ENST00000566320 546 ntTSL 514.61□□□□□ -0.072e-9■■□□□ 14.3
PRPF8Q6P2Q9 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.082e-9■■□□□ 14.3
PRPF8Q6P2Q9 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC14.41□□□□□ -0.11e-6■■□□□ 14.3
PRPF8Q6P2Q9 FBXL19-208ENST00000565939 817 ntTSL 214.36□□□□□ -0.112e-9■■□□□ 14.3
PRPF8Q6P2Q9 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.12□□□□□ -0.151e-6■■□□□ 14.3
PRPF8Q6P2Q9 DHX15-210ENST00000513092 567 ntTSL 414.12□□□□□ -0.152e-9■■□□□ 14.3
PRPF8Q6P2Q9 STK11IP-203ENST00000456857 578 ntTSL 512.54□□□□□ -0.41e-6■■□□□ 14.3
PRPF8Q6P2Q9 FGGY-225ENST00000635297 1738 ntTSL 512.3□□□□□ -0.442e-9■■□□□ 14.3
PRPF8Q6P2Q9 STK11IP-211ENST00000475843 546 ntTSL 312.26□□□□□ -0.451e-6■■□□□ 14.3
PRPF8Q6P2Q9 DISC1-210ENST00000468399 1871 ntTSL 212.19□□□□□ -0.462e-9■■□□□ 14.3
PRPF8Q6P2Q9 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.472e-9■■□□□ 14.3
PRPF8Q6P2Q9 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.03□□□□□ -0.482e-9■■□□□ 14.3
PRPF8Q6P2Q9 FAM60A-204ENST00000536836 1734 ntTSL 211.7□□□□□ -0.542e-9■■□□□ 14.3
PRPF8Q6P2Q9 FGGY-211ENST00000472783 333 ntTSL 511.68□□□□□ -0.542e-9■■□□□ 14.3
PRPF8Q6P2Q9 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC11.51□□□□□ -0.572e-9■■□□□ 14.3
Retrieved 100 of 73,762 protein–RNA pairs in 1579.7 ms