RNA–Protein interactions for RNA: ENST00000276052.10

CDK16-201, Transcript of cyclin dependent kinase 16, humanhuman

TSL 2 BASIC

Gene CDK16, Length 3,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-201ENST00000276052 NISCHQ9Y2I1 1504 aa28.58■■■□□ 2.17
CDK16-201ENST00000276052 CCDC180Q9P1Z9 1646 aa24.59■■□□□ 1.53
CDK16-201ENST00000276052 DCAF8L2P0C7V8 631 aa24.31■■□□□ 1.48
CDK16-201ENST00000276052 SHROOM4Q9ULL8 1493 aa24.03■■□□□ 1.44
CDK16-201ENST00000276052 ZCCHC6Q5VYS8 1495 aaKnown RBP23.97■■□□□ 1.43
CDK16-201ENST00000276052 ABCC9O60706 1549 aa23.87■■□□□ 1.41
CDK16-201ENST00000276052 DCAF1Q9Y4B6 1507 aa23.29■■□□□ 1.32
CDK16-201ENST00000276052 SCRIBQ14160 1630 aa23.15■■□□□ 1.3
CDK16-201ENST00000276052 SUPT5HO00267 1087 aaKnown RBP23.11■■□□□ 1.29
CDK16-201ENST00000276052 NACADO15069 1562 aa22.99■■□□□ 1.27
CDK16-201ENST00000276052 MYO15BQ96JP2 1530 aa22.91■■□□□ 1.26
CDK16-201ENST00000276052 RB1CC1Q8TDY2 1594 aa22.87■■□□□ 1.25
CDK16-201ENST00000276052 PABPN1Q86U42 306 aaKnown RBP eCLIP22.72■■□□□ 1.232e-6■■□□□ 12.2
CDK16-201ENST00000276052 UNC13AQ9UPW8 1703 aa22.55■■□□□ 1.2
CDK16-201ENST00000276052 CECR2Q9BXF3 1484 aa22.49■■□□□ 1.19
CDK16-201ENST00000276052 RSF1Q96T23 1441 aaPredicted RBP22.32■■□□□ 1.16
CDK16-201ENST00000276052 BICRAQ9NZM4 1560 aa22.31■■□□□ 1.16
CDK16-201ENST00000276052 MROH2BQ7Z745 1585 aa22.26■■□□□ 1.15
CDK16-201ENST00000276052 CHIC1Q5VXU3 224 aa22.19■■□□□ 1.14
CDK16-201ENST00000276052 WIZO95785 1651 aa22.1■■□□□ 1.13
CDK16-201ENST00000276052 BAZ1AQ9NRL2 1556 aaPredicted RBP21.99■■□□□ 1.11
CDK16-201ENST00000276052 SMARCA4P51532 1647 aa21.96■■□□□ 1.11
CDK16-201ENST00000276052 EIF4G1Q04637 1599 aaKnown RBP21.65■■□□□ 1.06
CDK16-201ENST00000276052 ATAD2BQ9ULI0 1458 aa21.64■■□□□ 1.06
CDK16-201ENST00000276052 TOP2AP11388 1531 aaKnown RBP21.63■■□□□ 1.05
CDK16-201ENST00000276052 LOC105371045A0A1W2PR82 267 aa21.62■■□□□ 1.05
CDK16-201ENST00000276052 CCDC88BA6NC98 1476 aa21.61■■□□□ 1.05
CDK16-201ENST00000276052 BAZ1BQ9UIG0 1483 aaKnown RBP21.55■■□□□ 1.04
CDK16-201ENST00000276052 SMARCA2P51531 1590 aa21.53■■□□□ 1.04
CDK16-201ENST00000276052 TRIM41Q8WV44 630 aa21.48■■□□□ 1.03
CDK16-201ENST00000276052 PEG3Q9GZU2 1588 aa21.47■■□□□ 1.03
CDK16-201ENST00000276052 FAM9AQ8IZU1 332 aaPredicted RBP21.45■■□□□ 1.02
CDK16-201ENST00000276052 EHMT2Q96KQ7 1210 aa21.44■■□□□ 1.02
CDK16-201ENST00000276052 CC2D2AQ9P2K1 1620 aa21.38■■□□□ 1.01
CDK16-201ENST00000276052 DNAJC5BQ9UF47 199 aa21.37■■□□□ 1.01
CDK16-201ENST00000276052 ABCC8Q09428 1581 aa21.35■■□□□ 1.01
CDK16-201ENST00000276052 NCAPD3P42695 1498 aa21.31■■□□□ 1
CDK16-201ENST00000276052 HMGXB3Q12766 1538 aa21.2■□□□□ 0.98
CDK16-201ENST00000276052 PCGF6Q9BYE7 350 aa21.17■□□□□ 0.98
CDK16-201ENST00000276052 WRNQ14191 1432 aaPredicted RBP eCLIP20.99■□□□□ 0.95
CDK16-201ENST00000276052 NESP48681 1621 aa20.99■□□□□ 0.95
CDK16-201ENST00000276052 SOGA1O94964 1423 aa20.95■□□□□ 0.94
CDK16-201ENST00000276052 SYNJ1O43426 1573 aa20.95■□□□□ 0.94
CDK16-201ENST00000276052 RUSC2Q8N2Y8 1516 aa20.93■□□□□ 0.94
CDK16-201ENST00000276052 CFTRP13569 1480 aa20.91■□□□□ 0.94
CDK16-201ENST00000276052 CADPSQ9ULU8 1353 aa20.9■□□□□ 0.94
CDK16-201ENST00000276052 HRCP23327 699 aa20.79■□□□□ 0.92
CDK16-201ENST00000276052 CUX1P39880 1505 aa20.76■□□□□ 0.91
CDK16-201ENST00000276052 TRIM26Q12899 539 aaPredicted RBP20.76■□□□□ 0.91
CDK16-201ENST00000276052 PPARGC1BQ86YN6 1023 aaKnown RBP20.73■□□□□ 0.91
CDK16-201ENST00000276052 FANCD2Q9BXW9 1451 aa20.72■□□□□ 0.91
CDK16-201ENST00000276052 CSRNP3Q8WYN3 585 aa20.69■□□□□ 0.9
CDK16-201ENST00000276052 RANGAP1P46060 587 aaPredicted RBP20.69■□□□□ 0.9
CDK16-201ENST00000276052 TOP2BQ02880 1626 aa20.67■□□□□ 0.9
CDK16-201ENST00000276052 UBTFP17480 764 aaKnown RBP20.64■□□□□ 0.89
CDK16-201ENST00000276052 PRDM2Q13029 1718 aa20.6■□□□□ 0.89
CDK16-201ENST00000276052 BIVM-ERCC5R4GMW8 1640 aa20.58■□□□□ 0.88
CDK16-201ENST00000276052 FGD5Q6ZNL6 1462 aa20.55■□□□□ 0.88
CDK16-201ENST00000276052 CEP164Q9UPV0 1460 aa20.53■□□□□ 0.88
CDK16-201ENST00000276052 RAD54L2Q9Y4B4 1467 aa20.53■□□□□ 0.88
CDK16-201ENST00000276052 LAMC3Q9Y6N6 1575 aa20.53■□□□□ 0.88
CDK16-201ENST00000276052 KIF21AQ7Z4S6 1674 aa20.52■□□□□ 0.88
CDK16-201ENST00000276052 URB2Q14146 1524 aaKnown RBP20.49■□□□□ 0.87
CDK16-201ENST00000276052 PDS5BQ9NTI5 1447 aa20.49■□□□□ 0.87
CDK16-201ENST00000276052 TTBK1Q5TCY1 1321 aaPredicted RBP20.48■□□□□ 0.87
CDK16-201ENST00000276052 CUX2O14529 1486 aa20.48■□□□□ 0.87
CDK16-201ENST00000276052 TOPBP1Q92547 1522 aa20.47■□□□□ 0.87
CDK16-201ENST00000276052 RAPGEF2Q9Y4G8 1499 aa20.45■□□□□ 0.86
CDK16-201ENST00000276052 EEA1Q15075 1411 aa20.43■□□□□ 0.86
CDK16-201ENST00000276052 CEP162Q5TB80 1403 aa20.43■□□□□ 0.86
CDK16-201ENST00000276052 POLA1P09884 1462 aaPredicted RBP20.42■□□□□ 0.86
CDK16-201ENST00000276052 KIF27Q86VH2 1401 aa20.39■□□□□ 0.86
CDK16-201ENST00000276052 TNIKQ9UKE5 1360 aa20.39■□□□□ 0.86
CDK16-201ENST00000276052 DNMBPQ6XZF7 1577 aa20.39■□□□□ 0.85
CDK16-201ENST00000276052 TDRD9Q8NDG6 1382 aaKnown RBP20.38■□□□□ 0.85
CDK16-201ENST00000276052 GOLGA3Q08378 1498 aa20.36■□□□□ 0.85
CDK16-201ENST00000276052 ERCC6Q03468 1493 aa20.35■□□□□ 0.85
CDK16-201ENST00000276052 IGF1RP08069 1367 aa20.3■□□□□ 0.84
CDK16-201ENST00000276052 KIF21BO75037 1637 aa20.25■□□□□ 0.83
CDK16-201ENST00000276052 PRXQ9BXM0 1461 aa20.24■□□□□ 0.83
CDK16-201ENST00000276052 MRC2Q9UBG0 1479 aa20.23■□□□□ 0.83
CDK16-201ENST00000276052 CARMIL1Q5VZK9 1371 aa20.21■□□□□ 0.83
CDK16-201ENST00000276052 AQRO60306 1485 aaKnown RBP eCLIP20.2■□□□□ 0.823e-7■■■■■ 31.9
CDK16-201ENST00000276052 ABCA10Q8WWZ4 1543 aa20.2■□□□□ 0.82
CDK16-201ENST00000276052 CLIP1P30622 1438 aa20.17■□□□□ 0.82
CDK16-201ENST00000276052 P3H3Q8IVL6 736 aa20.16■□□□□ 0.82
CDK16-201ENST00000276052 ZNF608Q9ULD9 1512 aaPredicted RBP20.15■□□□□ 0.82
CDK16-201ENST00000276052 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.13■□□□□ 0.81
CDK16-201ENST00000276052 GAPVD1Q14C86 1478 aa20.11■□□□□ 0.81
CDK16-201ENST00000276052 TARBP1Q13395 1621 aaKnown RBP20.09■□□□□ 0.81
CDK16-201ENST00000276052 ERICH3Q5RHP9 1530 aa20.07■□□□□ 0.8
CDK16-201ENST00000276052 WDR97A6NE52 1622 aa20.06■□□□□ 0.8
CDK16-201ENST00000276052 WDR62O43379 1518 aa20.05■□□□□ 0.8
CDK16-201ENST00000276052 THOC2Q8NI27 1593 aaKnown RBP20.04■□□□□ 0.8
CDK16-201ENST00000276052 ZEB1P37275 1124 aaPredicted RBP20.04■□□□□ 0.8
CDK16-201ENST00000276052 FBLN2P98095 1184 aa20.02■□□□□ 0.8
CDK16-201ENST00000276052 ABCA5Q8WWZ7 1642 aa20.02■□□□□ 0.8
CDK16-201ENST00000276052 CCER1Q8TC90 406 aaPredicted RBP19.99■□□□□ 0.79
CDK16-201ENST00000276052 ATP1B4Q9UN42 357 aaPredicted RBP19.97■□□□□ 0.79
CDK16-201ENST00000276052 ARAP1Q96P48 1450 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms