RNA–Protein interactions for RNA: ENST00000517502.5

IKBKB-204, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 3

Gene IKBKB, Length 498 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-204ENST00000517502 NISCHQ9Y2I1 1504 aa23.79■■□□□ 1.4
IKBKB-204ENST00000517502 ABCC9O60706 1549 aa21.66■■□□□ 1.06
IKBKB-204ENST00000517502 DNAJC5BQ9UF47 199 aa21.41■■□□□ 1.02
IKBKB-204ENST00000517502 CCDC180Q9P1Z9 1646 aa20.98■□□□□ 0.95
IKBKB-204ENST00000517502 DNAJC5Q9H3Z4 198 aa20.66■□□□□ 0.9
IKBKB-204ENST00000517502 RB1CC1Q8TDY2 1594 aa20.19■□□□□ 0.82
IKBKB-204ENST00000517502 DCAF8L2P0C7V8 631 aa20.11■□□□□ 0.81
IKBKB-204ENST00000517502 PABPN1Q86U42 306 aaKnown RBP eCLIP19.97■□□□□ 0.79
IKBKB-204ENST00000517502 ZCCHC6Q5VYS8 1495 aaKnown RBP19.82■□□□□ 0.76
IKBKB-204ENST00000517502 NACADO15069 1562 aa19.78■□□□□ 0.76
IKBKB-204ENST00000517502 CECR2Q9BXF3 1484 aa19.7■□□□□ 0.74
IKBKB-204ENST00000517502 MYO15BQ96JP2 1530 aa19.69■□□□□ 0.74
IKBKB-204ENST00000517502 DCAF1Q9Y4B6 1507 aa19.66■□□□□ 0.74
IKBKB-204ENST00000517502 UNC13AQ9UPW8 1703 aa19.64■□□□□ 0.73
IKBKB-204ENST00000517502 BICRAQ9NZM4 1560 aa19.58■□□□□ 0.73
IKBKB-204ENST00000517502 CC2D2AQ9P2K1 1620 aa19.54■□□□□ 0.72
IKBKB-204ENST00000517502 SHROOM4Q9ULL8 1493 aa19.35■□□□□ 0.69
IKBKB-204ENST00000517502 CUX2O14529 1486 aa19.3■□□□□ 0.68
IKBKB-204ENST00000517502 SCRIBQ14160 1630 aa19.23■□□□□ 0.67
IKBKB-204ENST00000517502 EIF4G1Q04637 1599 aaKnown RBP19.22■□□□□ 0.67
IKBKB-204ENST00000517502 TRIM41Q8WV44 630 aa19.15■□□□□ 0.66
IKBKB-204ENST00000517502 ERCC6Q03468 1493 aa18.85■□□□□ 0.61
IKBKB-204ENST00000517502 BAZ1AQ9NRL2 1556 aaPredicted RBP18.46■□□□□ 0.55
IKBKB-204ENST00000517502 AEBP2Q6ZN18 517 aaPredicted RBP18.43■□□□□ 0.54
IKBKB-204ENST00000517502 SMARCA4P51532 1647 aa18.38■□□□□ 0.53
IKBKB-204ENST00000517502 THOC2Q8NI27 1593 aaKnown RBP18.35■□□□□ 0.53
IKBKB-204ENST00000517502 MROH2BQ7Z745 1585 aa18.31■□□□□ 0.52
IKBKB-204ENST00000517502 SMARCA2P51531 1590 aa18.3■□□□□ 0.52
IKBKB-204ENST00000517502 ATAD2BQ9ULI0 1458 aa18.29■□□□□ 0.52
IKBKB-204ENST00000517502 NCAPD3P42695 1498 aa18.27■□□□□ 0.52
IKBKB-204ENST00000517502 NESP48681 1621 aa18.24■□□□□ 0.51
IKBKB-204ENST00000517502 RSF1Q96T23 1441 aaPredicted RBP18.23■□□□□ 0.51
IKBKB-204ENST00000517502 OSCARQ8IYS5 282 aa18.21■□□□□ 0.51
IKBKB-204ENST00000517502 BAZ1BQ9UIG0 1483 aaKnown RBP18.2■□□□□ 0.5
IKBKB-204ENST00000517502 PEG3Q9GZU2 1588 aa18.17■□□□□ 0.5
IKBKB-204ENST00000517502 HMGXB3Q12766 1538 aa18.13■□□□□ 0.49
IKBKB-204ENST00000517502 SUPT5HO00267 1087 aaKnown RBP18.11■□□□□ 0.49
IKBKB-204ENST00000517502 WIZO95785 1651 aa18.1■□□□□ 0.49
IKBKB-204ENST00000517502 LAMC3Q9Y6N6 1575 aa18.04■□□□□ 0.48
IKBKB-204ENST00000517502 RIMBP3CA6NJZ7 1639 aa18.02■□□□□ 0.48
IKBKB-204ENST00000517502 RIMBP3BA6NNM3 1639 aa18.02■□□□□ 0.48
IKBKB-204ENST00000517502 RIMBP3Q9UFD9 1639 aa18.02■□□□□ 0.48
IKBKB-204ENST00000517502 PDS5BQ9NTI5 1447 aa18■□□□□ 0.47
IKBKB-204ENST00000517502 TRHP20396 242 aaPredicted RBP18■□□□□ 0.47
IKBKB-204ENST00000517502 KIF21AQ7Z4S6 1674 aa17.99■□□□□ 0.47
IKBKB-204ENST00000517502 TOP2AP11388 1531 aaKnown RBP17.97■□□□□ 0.47
IKBKB-204ENST00000517502 MRC2Q9UBG0 1479 aa17.87■□□□□ 0.45
IKBKB-204ENST00000517502 WDR62O43379 1518 aa17.87■□□□□ 0.45
IKBKB-204ENST00000517502 ARHGEF11O15085 1522 aa17.85■□□□□ 0.45
IKBKB-204ENST00000517502 ILDR1Q86SU0 546 aaPredicted RBP17.83■□□□□ 0.44
IKBKB-204ENST00000517502 CADPSQ9ULU8 1353 aa17.8■□□□□ 0.44
IKBKB-204ENST00000517502 CYB5RLQ6IPT4 315 aa17.8■□□□□ 0.44
IKBKB-204ENST00000517502 CCDC88BA6NC98 1476 aa17.79■□□□□ 0.44
IKBKB-204ENST00000517502 CFTRP13569 1480 aa17.67■□□□□ 0.42
IKBKB-204ENST00000517502 ARAP1Q96P48 1450 aa17.58■□□□□ 0.41
IKBKB-204ENST00000517502 FANCD2Q9BXW9 1451 aa17.56■□□□□ 0.4
IKBKB-204ENST00000517502 CEP164Q9UPV0 1460 aa17.55■□□□□ 0.4
IKBKB-204ENST00000517502 PRDM2Q13029 1718 aa17.38■□□□□ 0.37
IKBKB-204ENST00000517502 ABCC8Q09428 1581 aa17.37■□□□□ 0.37
IKBKB-204ENST00000517502 URB2Q14146 1524 aaKnown RBP17.31■□□□□ 0.36
IKBKB-204ENST00000517502 ZNF608Q9ULD9 1512 aaPredicted RBP17.27■□□□□ 0.36
IKBKB-204ENST00000517502 IFT140Q96RY7 1462 aa17.27■□□□□ 0.36
IKBKB-204ENST00000517502 TOPBP1Q92547 1522 aa17.26■□□□□ 0.35
IKBKB-204ENST00000517502 DNMBPQ6XZF7 1577 aa17.25■□□□□ 0.35
IKBKB-204ENST00000517502 WRNQ14191 1432 aaPredicted RBP eCLIP17.23■□□□□ 0.35
IKBKB-204ENST00000517502 CHD1O14646 1710 aa17.22■□□□□ 0.35
IKBKB-204ENST00000517502 SOGA1O94964 1423 aa17.17■□□□□ 0.34
IKBKB-204ENST00000517502 CUX1P39880 1505 aa17.16■□□□□ 0.34
IKBKB-204ENST00000517502 POLA1P09884 1462 aaPredicted RBP17.13■□□□□ 0.33
IKBKB-204ENST00000517502 FGD5Q6ZNL6 1462 aa17.13■□□□□ 0.33
IKBKB-204ENST00000517502 EIF4G3O43432 1585 aaKnown RBP17.13■□□□□ 0.33
IKBKB-204ENST00000517502 FBLN2P98095 1184 aa17.12■□□□□ 0.33
IKBKB-204ENST00000517502 KDM4FA0A1W2PPD8 638 aa17.11■□□□□ 0.33
IKBKB-204ENST00000517502 RAD54L2Q9Y4B4 1467 aa17.08■□□□□ 0.32
IKBKB-204ENST00000517502 TOP2BQ02880 1626 aa17.07■□□□□ 0.32
IKBKB-204ENST00000517502 SYNJ1O43426 1573 aa17.05■□□□□ 0.32
IKBKB-204ENST00000517502 CLASP1Q7Z460 1538 aa17.05■□□□□ 0.32
IKBKB-204ENST00000517502 TDRD9Q8NDG6 1382 aaKnown RBP17.03■□□□□ 0.32
IKBKB-204ENST00000517502 BIVM-ERCC5R4GMW8 1640 aa17.02■□□□□ 0.31
IKBKB-204ENST00000517502 FBXO41Q8TF61 875 aa17.01■□□□□ 0.31
IKBKB-204ENST00000517502 ERCC6L2Q5T890 1561 aa17.01■□□□□ 0.31
IKBKB-204ENST00000517502 AQRO60306 1485 aaKnown RBP eCLIP17■□□□□ 0.31
IKBKB-204ENST00000517502 TARBP1Q13395 1621 aaKnown RBP16.98■□□□□ 0.31
IKBKB-204ENST00000517502 ABCA10Q8WWZ4 1543 aa16.97■□□□□ 0.31
IKBKB-204ENST00000517502 GAPVD1Q14C86 1478 aa16.97■□□□□ 0.31
IKBKB-204ENST00000517502 CHIC1Q5VXU3 224 aa16.92■□□□□ 0.3
IKBKB-204ENST00000517502 WDR97A6NE52 1622 aa16.92■□□□□ 0.3
IKBKB-204ENST00000517502 KIF27Q86VH2 1401 aa16.91■□□□□ 0.3
IKBKB-204ENST00000517502 CHMP7Q8WUX9 453 aaPredicted RBP16.91■□□□□ 0.3
IKBKB-204ENST00000517502 GRIN2BQ13224 1484 aa16.91■□□□□ 0.3
IKBKB-204ENST00000517502 LMTK3Q96Q04 1460 aa16.9■□□□□ 0.3
IKBKB-204ENST00000517502 KIF13AQ9H1H9 1805 aa16.88■□□□□ 0.29
IKBKB-204ENST00000517502 SOCS7O14512 581 aa16.84■□□□□ 0.29
IKBKB-204ENST00000517502 HECW2Q9P2P5 1572 aa16.83■□□□□ 0.28
IKBKB-204ENST00000517502 SNAPC4Q5SXM2 1469 aa16.82■□□□□ 0.28
IKBKB-204ENST00000517502 MAGI1Q96QZ7 1491 aaPredicted RBP16.82■□□□□ 0.28
IKBKB-204ENST00000517502 ABCA5Q8WWZ7 1642 aa16.79■□□□□ 0.28
IKBKB-204ENST00000517502 ERICH3Q5RHP9 1530 aa16.78■□□□□ 0.28
IKBKB-204ENST00000517502 IGF1RP08069 1367 aa16.77■□□□□ 0.28
IKBKB-204ENST00000517502 FHAD1B1AJZ9 1412 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms