Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.41■□□□□ 0.7
SNIP1Q8TAD8 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.41■□□□□ 0.7
SNIP1Q8TAD8 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNIP1Q8TAD8 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNIP1Q8TAD8 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNIP1Q8TAD8 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SNIP1Q8TAD8 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNIP1Q8TAD8 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNIP1Q8TAD8 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNIP1Q8TAD8 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SNIP1Q8TAD8 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNIP1Q8TAD8 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNIP1Q8TAD8 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNIP1Q8TAD8 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNIP1Q8TAD8 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.4■□□□□ 0.7
SNIP1Q8TAD8 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNIP1Q8TAD8 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNIP1Q8TAD8 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNIP1Q8TAD8 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SNIP1Q8TAD8 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNIP1Q8TAD8 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNIP1Q8TAD8 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.4■□□□□ 0.7
SNIP1Q8TAD8 C2orf69P4-201ENST00000565394 541 ntBASIC19.4■□□□□ 0.7
SNIP1Q8TAD8 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.4■□□□□ 0.7
SNIP1Q8TAD8 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNIP1Q8TAD8 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNIP1Q8TAD8 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SNIP1Q8TAD8 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNIP1Q8TAD8 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SNIP1Q8TAD8 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNIP1Q8TAD8 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
SNIP1Q8TAD8 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SNIP1Q8TAD8 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.4■□□□□ 0.7
SNIP1Q8TAD8 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNIP1Q8TAD8 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
SNIP1Q8TAD8 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SNIP1Q8TAD8 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SNIP1Q8TAD8 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
SNIP1Q8TAD8 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNIP1Q8TAD8 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SNIP1Q8TAD8 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SNIP1Q8TAD8 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SNIP1Q8TAD8 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.39■□□□□ 0.69
SNIP1Q8TAD8 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNIP1Q8TAD8 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNIP1Q8TAD8 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.39■□□□□ 0.69
SNIP1Q8TAD8 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.39■□□□□ 0.69
SNIP1Q8TAD8 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNIP1Q8TAD8 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNIP1Q8TAD8 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SNIP1Q8TAD8 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNIP1Q8TAD8 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNIP1Q8TAD8 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SNIP1Q8TAD8 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNIP1Q8TAD8 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNIP1Q8TAD8 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNIP1Q8TAD8 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SNIP1Q8TAD8 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SNIP1Q8TAD8 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
SNIP1Q8TAD8 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNIP1Q8TAD8 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNIP1Q8TAD8 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SNIP1Q8TAD8 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.38■□□□□ 0.69
SNIP1Q8TAD8 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNIP1Q8TAD8 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SNIP1Q8TAD8 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNIP1Q8TAD8 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SNIP1Q8TAD8 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.37■□□□□ 0.69
SNIP1Q8TAD8 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.37■□□□□ 0.69
SNIP1Q8TAD8 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNIP1Q8TAD8 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
SNIP1Q8TAD8 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNIP1Q8TAD8 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNIP1Q8TAD8 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SNIP1Q8TAD8 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.37■□□□□ 0.69
SNIP1Q8TAD8 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
SNIP1Q8TAD8 AL049597.2-201ENST00000565575 961 ntBASIC19.37■□□□□ 0.69
SNIP1Q8TAD8 AC026471.5-201ENST00000615068 467 ntBASIC19.37■□□□□ 0.69
SNIP1Q8TAD8 AC092865.7-201ENST00000641832 219 ntBASIC19.37■□□□□ 0.69
SNIP1Q8TAD8 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.37■□□□□ 0.69
SNIP1Q8TAD8 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNIP1Q8TAD8 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNIP1Q8TAD8 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
SNIP1Q8TAD8 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNIP1Q8TAD8 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNIP1Q8TAD8 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNIP1Q8TAD8 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNIP1Q8TAD8 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.36■□□□□ 0.69
SNIP1Q8TAD8 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SNIP1Q8TAD8 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SNIP1Q8TAD8 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.36■□□□□ 0.69
SNIP1Q8TAD8 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SNIP1Q8TAD8 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.36■□□□□ 0.69
SNIP1Q8TAD8 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.36■□□□□ 0.69
SNIP1Q8TAD8 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.36■□□□□ 0.69
SNIP1Q8TAD8 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SNIP1Q8TAD8 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SNIP1Q8TAD8 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SNIP1Q8TAD8 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SNIP1Q8TAD8 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms