Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
C3orf56Q8N813 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
C3orf56Q8N813 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
C3orf56Q8N813 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC16.07■□□□□ 0.16
C3orf56Q8N813 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
C3orf56Q8N813 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC16.07■□□□□ 0.16
C3orf56Q8N813 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
C3orf56Q8N813 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C3orf56Q8N813 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
C3orf56Q8N813 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C3orf56Q8N813 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
C3orf56Q8N813 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC16.06■□□□□ 0.16
C3orf56Q8N813 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.06■□□□□ 0.16
C3orf56Q8N813 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C3orf56Q8N813 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C3orf56Q8N813 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
C3orf56Q8N813 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC16.06■□□□□ 0.16
C3orf56Q8N813 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
C3orf56Q8N813 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
C3orf56Q8N813 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
C3orf56Q8N813 CYP21A1P-202ENST00000354927 1481 ntBASIC16.06■□□□□ 0.16
C3orf56Q8N813 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
C3orf56Q8N813 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C3orf56Q8N813 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C3orf56Q8N813 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.06■□□□□ 0.16
C3orf56Q8N813 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
C3orf56Q8N813 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
C3orf56Q8N813 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C3orf56Q8N813 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C3orf56Q8N813 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C3orf56Q8N813 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
C3orf56Q8N813 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
C3orf56Q8N813 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
C3orf56Q8N813 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
C3orf56Q8N813 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.06■□□□□ 0.16
C3orf56Q8N813 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.06■□□□□ 0.16
C3orf56Q8N813 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.06■□□□□ 0.16
C3orf56Q8N813 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.06■□□□□ 0.16
C3orf56Q8N813 C2orf69P4-201ENST00000565394 541 ntBASIC16.06■□□□□ 0.16
C3orf56Q8N813 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC16.06■□□□□ 0.16
C3orf56Q8N813 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.06■□□□□ 0.16
C3orf56Q8N813 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C3orf56Q8N813 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
C3orf56Q8N813 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.05■□□□□ 0.16
C3orf56Q8N813 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC16.05■□□□□ 0.16
C3orf56Q8N813 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
C3orf56Q8N813 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C3orf56Q8N813 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C3orf56Q8N813 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
C3orf56Q8N813 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
C3orf56Q8N813 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C3orf56Q8N813 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C3orf56Q8N813 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C3orf56Q8N813 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
C3orf56Q8N813 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.05■□□□□ 0.16
C3orf56Q8N813 AL353708.3-201ENST00000610272 989 ntBASIC16.05■□□□□ 0.16
C3orf56Q8N813 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.05■□□□□ 0.16
C3orf56Q8N813 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.05■□□□□ 0.16
C3orf56Q8N813 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
C3orf56Q8N813 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
C3orf56Q8N813 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
C3orf56Q8N813 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
C3orf56Q8N813 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
C3orf56Q8N813 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C3orf56Q8N813 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC16.05■□□□□ 0.16
C3orf56Q8N813 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
C3orf56Q8N813 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C3orf56Q8N813 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
C3orf56Q8N813 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC16.04■□□□□ 0.16
C3orf56Q8N813 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C3orf56Q8N813 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
C3orf56Q8N813 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
C3orf56Q8N813 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C3orf56Q8N813 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
C3orf56Q8N813 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC16.04■□□□□ 0.16
C3orf56Q8N813 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C3orf56Q8N813 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
C3orf56Q8N813 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C3orf56Q8N813 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C3orf56Q8N813 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.04■□□□□ 0.16
C3orf56Q8N813 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.04■□□□□ 0.16
C3orf56Q8N813 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.04■□□□□ 0.16
C3orf56Q8N813 AC006557.6-201ENST00000623071 864 ntBASIC16.04■□□□□ 0.16
C3orf56Q8N813 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C3orf56Q8N813 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C3orf56Q8N813 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.04■□□□□ 0.16
C3orf56Q8N813 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
C3orf56Q8N813 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C3orf56Q8N813 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
C3orf56Q8N813 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC16.03■□□□□ 0.16
C3orf56Q8N813 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.03■□□□□ 0.16
C3orf56Q8N813 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
C3orf56Q8N813 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
C3orf56Q8N813 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
C3orf56Q8N813 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C3orf56Q8N813 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC16.03■□□□□ 0.16
C3orf56Q8N813 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C3orf56Q8N813 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
C3orf56Q8N813 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C3orf56Q8N813 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms