Protein–RNA interactions for Protein: Q8IYB8

SUPV3L1, ATP-dependent RNA helicase SUPV3L1, mitochondrial, humanhuman

Known RBP eCLIP

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPV3L1Q8IYB8 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.517e-7■■■■■ 72.5
SUPV3L1Q8IYB8 BSG-211ENST00000576984 544 ntTSL 418.2■□□□□ 0.51e-7■■■■■ 72.5
SUPV3L1Q8IYB8 BSG-208ENST00000573784 559 ntTSL 418.03■□□□□ 0.481e-7■■■■■ 72.5
SUPV3L1Q8IYB8 HNRNPM-204ENST00000594907 1078 ntTSL 517.9■□□□□ 0.467e-7■■■■■ 72.5
SUPV3L1Q8IYB8 HNRNPM-213ENST00000600092 1086 ntTSL 217.53■□□□□ 0.47e-7■■■■■ 72.5
SUPV3L1Q8IYB8 BSG-210ENST00000576925 611 ntTSL 215.79■□□□□ 0.121e-7■■■■■ 72.5
SUPV3L1Q8IYB8 BSG-207ENST00000573216 545 ntTSL 415.68■□□□□ 0.11e-7■■■■■ 72.5
SUPV3L1Q8IYB8 BSG-213ENST00000613627 689 ntTSL 315.01□□□□□ -0.011e-7■■■■■ 72.5
SUPV3L1Q8IYB8 BSG-206ENST00000572899 582 ntTSL 214.94□□□□□ -0.021e-7■■■■■ 72.5
SUPV3L1Q8IYB8 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.242e-8■■■■■ 72.5
SUPV3L1Q8IYB8 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.142e-8■■■■■ 72.5
SUPV3L1Q8IYB8 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.142e-8■■■■■ 72.5
SUPV3L1Q8IYB8 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC13.14□□□□□ -0.312e-8■■■■■ 72.5
SUPV3L1Q8IYB8 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.963e-6■■■■■ 72.3
SUPV3L1Q8IYB8 CXXC5-209ENST00000507139 472 ntTSL 420.26■□□□□ 0.833e-6■■■■■ 72.3
SUPV3L1Q8IYB8 CXXC5-206ENST00000504844 777 ntTSL 219.83■□□□□ 0.773e-6■■■■■ 72.3
SUPV3L1Q8IYB8 CXXC5-203ENST00000502336 581 ntTSL 418.37■□□□□ 0.533e-6■■■■■ 72.3
SUPV3L1Q8IYB8 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.433e-6■■■■■ 72.3
SUPV3L1Q8IYB8 CXXC5-214ENST00000512816 558 ntTSL 315.8■□□□□ 0.123e-6■■■■■ 72.3
SUPV3L1Q8IYB8 CXXC5-202ENST00000502295 503 ntTSL 415.37■□□□□ 0.053e-6■■■■■ 72.3
SUPV3L1Q8IYB8 CXXC5-216ENST00000520967 878 ntTSL 314.99□□□□□ -0.013e-6■■■■■ 72.3
SUPV3L1Q8IYB8 CXXC5-207ENST00000504944 568 ntTSL 313.61□□□□□ -0.233e-6■■■■■ 72.3
SUPV3L1Q8IYB8 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.01■□□□□ 0.471e-6■■■■■ 72
SUPV3L1Q8IYB8 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.391e-6■■■■■ 72
SUPV3L1Q8IYB8 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.141e-6■■■■■ 72
SUPV3L1Q8IYB8 RREB1-205ENST00000467782 243 ntTSL 515.04■□□□□ -01e-6■■■■■ 72
SUPV3L1Q8IYB8 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.08□□□□□ -0.161e-6■■■■■ 72
SUPV3L1Q8IYB8 RREB1-209ENST00000491191 998 ntTSL 512.38□□□□□ -0.431e-6■■■■■ 72
SUPV3L1Q8IYB8 RREB1-206ENST00000471433 1021 ntTSL 512.38□□□□□ -0.431e-6■■■■■ 72
SUPV3L1Q8IYB8 RREB1-207ENST00000475946 9067 ntTSL 1 (best)8.63□□□□□ -1.031e-6■■■■■ 72
SUPV3L1Q8IYB8 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.824e-8■■■■■ 71.9
SUPV3L1Q8IYB8 GATA1-201ENST00000376665 1140 ntTSL 5 BASIC11.37□□□□□ -0.594e-8■■■■■ 71.9
SUPV3L1Q8IYB8 PLOD1-204ENST00000449038 762 ntTSL 516.02■□□□□ 0.161e-9■■■■■ 71.6
SUPV3L1Q8IYB8 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16■□□□□ 0.151e-9■■■■■ 71.6
SUPV3L1Q8IYB8 RAP1GAP-202ENST00000317967 600 ntTSL 214.3□□□□□ -0.121e-9■■■■■ 71.6
SUPV3L1Q8IYB8 RAP1GAP-213ENST00000611549 4294 ntTSL 513.44□□□□□ -0.261e-9■■■■■ 71.6
SUPV3L1Q8IYB8 PLOD1-202ENST00000358133 819 ntTSL 313.14□□□□□ -0.311e-9■■■■■ 71.6
SUPV3L1Q8IYB8 AGO2-205ENST00000519980 3141 ntTSL 1 (best) BASIC13.03□□□□□ -0.321e-9■■■■■ 71.6
SUPV3L1Q8IYB8 RAP1GAP-201ENST00000290101 3584 ntTSL 5 BASIC12.75□□□□□ -0.371e-9■■■■■ 71.6
SUPV3L1Q8IYB8 AGO2-209ENST00000523609 3050 ntTSL 1 (best)12.06□□□□□ -0.481e-9■■■■■ 71.6
SUPV3L1Q8IYB8 RAP1GAP-206ENST00000374765 3271 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.481e-9■■■■■ 71.6
SUPV3L1Q8IYB8 RAP1GAP-212ENST00000542643 3426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.651e-9■■■■■ 71.6
SUPV3L1Q8IYB8 RAP1GAP-208ENST00000464457 409 ntTSL 37.81□□□□□ -1.161e-9■■■■■ 71.6
SUPV3L1Q8IYB8 AGO2-202ENST00000517293 422 ntTSL 36.04□□□□□ -1.441e-9■■■■■ 71.6
SUPV3L1Q8IYB8 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.461e-9■■■■■ 71.6
SUPV3L1Q8IYB8 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.12■□□□□ 0.811e-6■■■■■ 71.4
SUPV3L1Q8IYB8 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.291e-6■■■■■ 71.4
SUPV3L1Q8IYB8 BCR-212ENST00000479188 658 ntTSL 412.77□□□□□ -0.372e-6■■■■■ 71.2
SUPV3L1Q8IYB8 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.187e-7■■■■■ 71
SUPV3L1Q8IYB8 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.117e-7■■■■■ 71
SUPV3L1Q8IYB8 AL031708.1-201ENST00000454337 5326 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.47e-7■■■■■ 71
SUPV3L1Q8IYB8 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.64■■□□□ 1.382e-7■■■■■ 70.3
SUPV3L1Q8IYB8 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.12e-7■■■■■ 70.3
SUPV3L1Q8IYB8 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC27.22■■□□□ 1.953e-6■■■■■ 69.6
SUPV3L1Q8IYB8 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.87■■□□□ 1.893e-6■■■■■ 69.6
SUPV3L1Q8IYB8 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC24.02■■□□□ 1.443e-6■■■■■ 69.6
SUPV3L1Q8IYB8 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.41■■□□□ 1.343e-6■■■■■ 69.6
SUPV3L1Q8IYB8 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.333e-6■■■■■ 69.6
SUPV3L1Q8IYB8 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.33e-6■■■■■ 69.6
SUPV3L1Q8IYB8 PTMA-206ENST00000412128 863 ntTSL 323.08■■□□□ 1.293e-6■■■■■ 69.6
SUPV3L1Q8IYB8 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.231e-7■■■■■ 69.6
SUPV3L1Q8IYB8 ZFYVE19-213ENST00000568062 580 ntTSL 322.25■■□□□ 1.151e-7■■■■■ 69.6
SUPV3L1Q8IYB8 AC132008.2-206ENST00000437008 838 ntTSL 222.2■■□□□ 1.143e-6■■■■■ 69.6
SUPV3L1Q8IYB8 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.13e-6■■■■■ 69.6
SUPV3L1Q8IYB8 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.091e-7■■■■■ 69.6
SUPV3L1Q8IYB8 RAB10-204ENST00000495146 1292 ntTSL 521.47■■□□□ 1.033e-6■■■■■ 69.6
SUPV3L1Q8IYB8 PTPRA-208ENST00000455631 1107 ntTSL 521.42■■□□□ 1.023e-6■■■■■ 69.6
SUPV3L1Q8IYB8 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 13e-6■■■■■ 69.6
SUPV3L1Q8IYB8 HNRNPDL-203ENST00000502762 2356 ntTSL 1 (best)21.31■■□□□ 13e-6■■■■■ 69.6
SUPV3L1Q8IYB8 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.973e-6■■■■■ 69.6
SUPV3L1Q8IYB8 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.03■□□□□ 0.963e-6■■■■■ 69.6
SUPV3L1Q8IYB8 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.953e-6■■■■■ 69.6
SUPV3L1Q8IYB8 SLC6A8-210ENST00000485324 2401 ntTSL 220.86■□□□□ 0.937e-9■■■■■ 69.6
SUPV3L1Q8IYB8 PPP1R12C-209ENST00000592993 2269 ntTSL 1 (best)20.67■□□□□ 0.93e-6■■■■■ 69.6
SUPV3L1Q8IYB8 LYL1-203ENST00000590974 902 ntTSL 320.66■□□□□ 0.91e-7■■■■■ 69.6
SUPV3L1Q8IYB8 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.893e-6■■■■■ 69.6
SUPV3L1Q8IYB8 CPNE7-203ENST00000525982 576 ntTSL 520.41■□□□□ 0.861e-7■■■■■ 69.6
SUPV3L1Q8IYB8 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.853e-6■■■■■ 69.6
SUPV3L1Q8IYB8 RNF4-205ENST00000504224 560 ntTSL 420.06■□□□□ 0.83e-6■■■■■ 69.6
SUPV3L1Q8IYB8 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.03■□□□□ 0.83e-6■■■■■ 69.6
SUPV3L1Q8IYB8 CHID1-216ENST00000529539 602 ntTSL 220.02■□□□□ 0.81e-7■■■■■ 69.6
SUPV3L1Q8IYB8 AC132008.2-202ENST00000414207 1286 ntTSL 520■□□□□ 0.793e-6■■■■■ 69.6
SUPV3L1Q8IYB8 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.95■□□□□ 0.782e-6■■■■■ 69.6
SUPV3L1Q8IYB8 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.85■□□□□ 0.772e-6■■■■■ 69.6
SUPV3L1Q8IYB8 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.62■□□□□ 0.732e-6■■■■■ 69.6
SUPV3L1Q8IYB8 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.52■□□□□ 0.724e-7■■■■■ 69.6
SUPV3L1Q8IYB8 HNRNPDL-209ENST00000630114 1433 ntTSL 519.5■□□□□ 0.713e-6■■■■■ 69.6
SUPV3L1Q8IYB8 ATP1A1-208ENST00000488733 1728 ntTSL 219.46■□□□□ 0.713e-6■■■■■ 69.6
SUPV3L1Q8IYB8 IRF1-207ENST00000463784 520 ntTSL 319.33■□□□□ 0.683e-6■■■■■ 69.6
SUPV3L1Q8IYB8 SLC12A4-212ENST00000573023 3649 ntTSL 519.25■□□□□ 0.671e-6■■■■■ 69.6
SUPV3L1Q8IYB8 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.622e-6■■■■■ 69.6
SUPV3L1Q8IYB8 IRF9-215ENST00000561415 1769 ntTSL 218.74■□□□□ 0.593e-6■■■■■ 69.6
SUPV3L1Q8IYB8 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.73■□□□□ 0.593e-6■■■■■ 69.6
SUPV3L1Q8IYB8 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.593e-6■■■■■ 69.6
SUPV3L1Q8IYB8 ATP1A1-204ENST00000418797 654 ntTSL 318.56■□□□□ 0.563e-6■■■■■ 69.6
SUPV3L1Q8IYB8 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.18■□□□□ 0.53e-6■■■■■ 69.6
SUPV3L1Q8IYB8 AGAP3-207ENST00000467724 826 ntTSL 518.06■□□□□ 0.483e-6■■■■■ 69.6
SUPV3L1Q8IYB8 AMBRA1-205ENST00000526606 522 ntTSL 417.9■□□□□ 0.463e-6■■■■■ 69.6
SUPV3L1Q8IYB8 MTA1-208ENST00000438610 2144 ntTSL 1 (best)17.78■□□□□ 0.442e-6■■■■■ 69.6
SUPV3L1Q8IYB8 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.436e-9■■■■■ 69.6
Retrieved 100 of 12,391 protein–RNA pairs in 93.5 ms