Protein–RNA interactions for Protein: P68366

TUBA4A, Tubulin alpha-4A chain, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4AP68366 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
TUBA4AP68366 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.2■□□□□ 0.66
TUBA4AP68366 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TUBA4AP68366 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.2■□□□□ 0.66
TUBA4AP68366 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
TUBA4AP68366 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.19■□□□□ 0.66
TUBA4AP68366 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TUBA4AP68366 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TUBA4AP68366 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.19■□□□□ 0.66
TUBA4AP68366 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TUBA4AP68366 AC026471.1-201ENST00000564629 3026 ntBASIC19.19■□□□□ 0.66
TUBA4AP68366 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TUBA4AP68366 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TUBA4AP68366 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.19■□□□□ 0.66
TUBA4AP68366 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TUBA4AP68366 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TUBA4AP68366 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.19■□□□□ 0.66
TUBA4AP68366 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TUBA4AP68366 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.19■□□□□ 0.66
TUBA4AP68366 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TUBA4AP68366 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TUBA4AP68366 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TUBA4AP68366 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TUBA4AP68366 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.18■□□□□ 0.66
TUBA4AP68366 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TUBA4AP68366 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TUBA4AP68366 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TUBA4AP68366 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TUBA4AP68366 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TUBA4AP68366 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TUBA4AP68366 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TUBA4AP68366 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TUBA4AP68366 AC099778.1-201ENST00000568593 1911 ntBASIC19.18■□□□□ 0.66
TUBA4AP68366 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
TUBA4AP68366 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TUBA4AP68366 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TUBA4AP68366 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.18■□□□□ 0.66
TUBA4AP68366 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.18■□□□□ 0.66
TUBA4AP68366 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TUBA4AP68366 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TUBA4AP68366 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.18■□□□□ 0.66
TUBA4AP68366 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TUBA4AP68366 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TUBA4AP68366 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TUBA4AP68366 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TUBA4AP68366 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.18■□□□□ 0.66
TUBA4AP68366 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TUBA4AP68366 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TUBA4AP68366 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.17■□□□□ 0.66
TUBA4AP68366 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TUBA4AP68366 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TUBA4AP68366 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TUBA4AP68366 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TUBA4AP68366 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.17■□□□□ 0.66
TUBA4AP68366 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TUBA4AP68366 AL512408.1-201ENST00000569378 2000 ntBASIC19.17■□□□□ 0.66
TUBA4AP68366 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TUBA4AP68366 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.17■□□□□ 0.66
TUBA4AP68366 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.17■□□□□ 0.66
TUBA4AP68366 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
TUBA4AP68366 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.17■□□□□ 0.66
TUBA4AP68366 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.17■□□□□ 0.66
TUBA4AP68366 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TUBA4AP68366 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TUBA4AP68366 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.16■□□□□ 0.66
TUBA4AP68366 AC004408.2-201ENST00000623613 2777 ntBASIC19.16■□□□□ 0.66
TUBA4AP68366 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TUBA4AP68366 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TUBA4AP68366 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.16■□□□□ 0.66
TUBA4AP68366 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TUBA4AP68366 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.16■□□□□ 0.66
TUBA4AP68366 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.16■□□□□ 0.66
TUBA4AP68366 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TUBA4AP68366 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TUBA4AP68366 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TUBA4AP68366 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.16■□□□□ 0.66
TUBA4AP68366 ZNRF2P3-201ENST00000424200 374 ntBASIC19.16■□□□□ 0.66
TUBA4AP68366 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TUBA4AP68366 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.16■□□□□ 0.66
TUBA4AP68366 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TUBA4AP68366 TSPY26P-201ENST00000476365 1326 ntBASIC19.16■□□□□ 0.66
TUBA4AP68366 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TUBA4AP68366 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TUBA4AP68366 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TUBA4AP68366 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.16■□□□□ 0.66
TUBA4AP68366 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TUBA4AP68366 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TUBA4AP68366 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.16■□□□□ 0.66
TUBA4AP68366 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TUBA4AP68366 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TUBA4AP68366 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TUBA4AP68366 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.15■□□□□ 0.66
TUBA4AP68366 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.15■□□□□ 0.66
TUBA4AP68366 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TUBA4AP68366 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TUBA4AP68366 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TUBA4AP68366 AC007225.1-201ENST00000566331 1836 ntBASIC19.15■□□□□ 0.66
TUBA4AP68366 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.15■□□□□ 0.66
TUBA4AP68366 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TUBA4AP68366 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms