Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDKL5O76039 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
CDKL5O76039 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC23.86■■□□□ 1.41
CDKL5O76039 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDKL5O76039 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC23.85■■□□□ 1.41
CDKL5O76039 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
CDKL5O76039 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
CDKL5O76039 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC23.85■■□□□ 1.41
CDKL5O76039 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC23.85■■□□□ 1.41
CDKL5O76039 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
CDKL5O76039 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC23.85■■□□□ 1.41
CDKL5O76039 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC23.85■■□□□ 1.41
CDKL5O76039 AL162412.1-201ENST00000567129 965 ntBASIC23.85■■□□□ 1.41
CDKL5O76039 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CDKL5O76039 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDKL5O76039 GABARAPL3-202ENST00000624044 1851 ntBASIC23.85■■□□□ 1.41
CDKL5O76039 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CDKL5O76039 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDKL5O76039 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDKL5O76039 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDKL5O76039 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDKL5O76039 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDKL5O76039 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDKL5O76039 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
CDKL5O76039 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC23.84■■□□□ 1.41
CDKL5O76039 GAS2L1P2-201ENST00000436355 1356 ntBASIC23.84■■□□□ 1.41
CDKL5O76039 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC23.84■■□□□ 1.41
CDKL5O76039 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CDKL5O76039 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC23.84■■□□□ 1.41
CDKL5O76039 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC23.84■■□□□ 1.41
CDKL5O76039 FAM21FP-204ENST00000608637 956 ntBASIC23.84■■□□□ 1.41
CDKL5O76039 MIR2861-201ENST00000636310 90 ntBASIC23.84■■□□□ 1.41
CDKL5O76039 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDKL5O76039 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CDKL5O76039 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
CDKL5O76039 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
CDKL5O76039 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDKL5O76039 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDKL5O76039 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDKL5O76039 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDKL5O76039 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
CDKL5O76039 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDKL5O76039 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDKL5O76039 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDKL5O76039 MIR935-201ENST00000401179 91 ntBASIC23.83■■□□□ 1.41
CDKL5O76039 CASP6-205ENST00000505486 538 ntTSL 4 BASIC23.83■■□□□ 1.41
CDKL5O76039 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC23.83■■□□□ 1.41
CDKL5O76039 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC23.83■■□□□ 1.41
CDKL5O76039 BID-214ENST00000617586 542 ntTSL 5 BASIC23.83■■□□□ 1.41
CDKL5O76039 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC23.83■■□□□ 1.41
CDKL5O76039 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDKL5O76039 AC073314.1-201ENST00000568729 2216 ntBASIC23.83■■□□□ 1.4
CDKL5O76039 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
CDKL5O76039 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC23.83■■□□□ 1.4
CDKL5O76039 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC23.83■■□□□ 1.4
CDKL5O76039 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CDKL5O76039 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC23.82■■□□□ 1.4
CDKL5O76039 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC23.82■■□□□ 1.4
CDKL5O76039 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDKL5O76039 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC23.82■■□□□ 1.4
CDKL5O76039 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDKL5O76039 PBX1-209ENST00000485769 834 ntTSL 2 BASIC23.82■■□□□ 1.4
CDKL5O76039 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC23.82■■□□□ 1.4
CDKL5O76039 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC23.82■■□□□ 1.4
CDKL5O76039 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
CDKL5O76039 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CDKL5O76039 AC011767.1-201ENST00000617410 1153 ntBASIC23.82■■□□□ 1.4
CDKL5O76039 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDKL5O76039 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDKL5O76039 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDKL5O76039 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDKL5O76039 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC23.82■■□□□ 1.4
CDKL5O76039 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CDKL5O76039 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC23.82■■□□□ 1.4
CDKL5O76039 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDKL5O76039 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
CDKL5O76039 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC23.82■■□□□ 1.4
CDKL5O76039 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC23.82■■□□□ 1.4
CDKL5O76039 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC23.82■■□□□ 1.4
CDKL5O76039 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDKL5O76039 LINC01006-201ENST00000333319 2292 ntBASIC23.81■■□□□ 1.4
CDKL5O76039 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
CDKL5O76039 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC23.81■■□□□ 1.4
CDKL5O76039 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
CDKL5O76039 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
CDKL5O76039 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDKL5O76039 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CDKL5O76039 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC23.81■■□□□ 1.4
CDKL5O76039 AC022517.1-201ENST00000592429 346 ntBASIC23.81■■□□□ 1.4
CDKL5O76039 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDKL5O76039 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDKL5O76039 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDKL5O76039 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDKL5O76039 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDKL5O76039 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDKL5O76039 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDKL5O76039 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CDKL5O76039 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC23.81■■□□□ 1.4
CDKL5O76039 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CDKL5O76039 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms