Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TRAV13-1A0A0B4J241 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV13-1A0A0B4J241 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV13-1A0A0B4J241 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV13-1A0A0B4J241 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV13-1A0A0B4J241 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV13-1A0A0B4J241 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC14.27□□□□□ -0.12
TRAV13-1A0A0B4J241 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
TRAV13-1A0A0B4J241 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV13-1A0A0B4J241 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
TRAV13-1A0A0B4J241 ASL-203ENST00000380839 1765 ntTSL 5 BASIC14.27□□□□□ -0.12
TRAV13-1A0A0B4J241 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
TRAV13-1A0A0B4J241 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.12
TRAV13-1A0A0B4J241 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
TRAV13-1A0A0B4J241 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC14.27□□□□□ -0.12
TRAV13-1A0A0B4J241 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV13-1A0A0B4J241 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
TRAV13-1A0A0B4J241 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAV13-1A0A0B4J241 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.13
TRAV13-1A0A0B4J241 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAV13-1A0A0B4J241 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC14.27□□□□□ -0.13
TRAV13-1A0A0B4J241 SMUG1P1-201ENST00000590640 811 ntBASIC14.27□□□□□ -0.13
TRAV13-1A0A0B4J241 SF1-220ENST00000626028 704 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAV13-1A0A0B4J241 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV13-1A0A0B4J241 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV13-1A0A0B4J241 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV13-1A0A0B4J241 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV13-1A0A0B4J241 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV13-1A0A0B4J241 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAV13-1A0A0B4J241 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
TRAV13-1A0A0B4J241 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV13-1A0A0B4J241 PXK-203ENST00000383715 1756 ntTSL 5 BASIC14.27□□□□□ -0.13
TRAV13-1A0A0B4J241 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV13-1A0A0B4J241 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV13-1A0A0B4J241 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV13-1A0A0B4J241 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAV13-1A0A0B4J241 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV13-1A0A0B4J241 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
TRAV13-1A0A0B4J241 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV13-1A0A0B4J241 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TRAV13-1A0A0B4J241 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TRAV13-1A0A0B4J241 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV13-1A0A0B4J241 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV13-1A0A0B4J241 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV13-1A0A0B4J241 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV13-1A0A0B4J241 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV13-1A0A0B4J241 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TRAV13-1A0A0B4J241 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV13-1A0A0B4J241 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAV13-1A0A0B4J241 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC14.26□□□□□ -0.13
TRAV13-1A0A0B4J241 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV13-1A0A0B4J241 MIR4466-201ENST00000606121 54 ntBASIC14.26□□□□□ -0.13
TRAV13-1A0A0B4J241 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV13-1A0A0B4J241 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV13-1A0A0B4J241 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV13-1A0A0B4J241 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV13-1A0A0B4J241 AFG3L1P-217ENST00000557444 2447 ntBASIC14.26□□□□□ -0.13
TRAV13-1A0A0B4J241 AC027702.1-201ENST00000563810 1770 ntBASIC14.26□□□□□ -0.13
TRAV13-1A0A0B4J241 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV13-1A0A0B4J241 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV13-1A0A0B4J241 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV13-1A0A0B4J241 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV13-1A0A0B4J241 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV13-1A0A0B4J241 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV13-1A0A0B4J241 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV13-1A0A0B4J241 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV13-1A0A0B4J241 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV13-1A0A0B4J241 ADM-207ENST00000530439 1839 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV13-1A0A0B4J241 AC007225.1-201ENST00000566331 1836 ntBASIC14.25□□□□□ -0.13
TRAV13-1A0A0B4J241 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
TRAV13-1A0A0B4J241 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
TRAV13-1A0A0B4J241 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV13-1A0A0B4J241 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV13-1A0A0B4J241 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC14.25□□□□□ -0.13
TRAV13-1A0A0B4J241 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV13-1A0A0B4J241 AL356441.2-201ENST00000443009 864 ntBASIC14.25□□□□□ -0.13
TRAV13-1A0A0B4J241 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAV13-1A0A0B4J241 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TRAV13-1A0A0B4J241 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV13-1A0A0B4J241 ME2-218ENST00000640965 2476 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAV13-1A0A0B4J241 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
TRAV13-1A0A0B4J241 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV13-1A0A0B4J241 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV13-1A0A0B4J241 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV13-1A0A0B4J241 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV13-1A0A0B4J241 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV13-1A0A0B4J241 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV13-1A0A0B4J241 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV13-1A0A0B4J241 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC14.24□□□□□ -0.13
TRAV13-1A0A0B4J241 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV13-1A0A0B4J241 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
TRAV13-1A0A0B4J241 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV13-1A0A0B4J241 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV13-1A0A0B4J241 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV13-1A0A0B4J241 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC14.24□□□□□ -0.13
TRAV13-1A0A0B4J241 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV13-1A0A0B4J241 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC14.24□□□□□ -0.13
TRAV13-1A0A0B4J241 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV13-1A0A0B4J241 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC14.24□□□□□ -0.13
TRAV13-1A0A0B4J241 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms