Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
IGKV1D-43A0A0B4J1Z2 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.16■□□□□ 0.5
IGKV1D-43A0A0B4J1Z2 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.16■□□□□ 0.5
IGKV1D-43A0A0B4J1Z2 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.16■□□□□ 0.5
IGKV1D-43A0A0B4J1Z2 AC010536.3-201ENST00000620306 533 ntBASIC18.16■□□□□ 0.5
IGKV1D-43A0A0B4J1Z2 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.16■□□□□ 0.5
IGKV1D-43A0A0B4J1Z2 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
IGKV1D-43A0A0B4J1Z2 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
IGKV1D-43A0A0B4J1Z2 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IGKV1D-43A0A0B4J1Z2 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IGKV1D-43A0A0B4J1Z2 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
IGKV1D-43A0A0B4J1Z2 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
IGKV1D-43A0A0B4J1Z2 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.15■□□□□ 0.5
IGKV1D-43A0A0B4J1Z2 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
IGKV1D-43A0A0B4J1Z2 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
IGKV1D-43A0A0B4J1Z2 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.15■□□□□ 0.5
IGKV1D-43A0A0B4J1Z2 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
IGKV1D-43A0A0B4J1Z2 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.15■□□□□ 0.5
IGKV1D-43A0A0B4J1Z2 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
IGKV1D-43A0A0B4J1Z2 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.15■□□□□ 0.5
IGKV1D-43A0A0B4J1Z2 AC007322.3-201ENST00000426526 701 ntBASIC18.15■□□□□ 0.5
IGKV1D-43A0A0B4J1Z2 TERF1P5-201ENST00000477545 1207 ntBASIC18.15■□□□□ 0.5
IGKV1D-43A0A0B4J1Z2 MFSD11-216ENST00000590393 1141 ntBASIC18.15■□□□□ 0.5
IGKV1D-43A0A0B4J1Z2 MIR5787-201ENST00000611784 55 ntBASIC18.15■□□□□ 0.5
IGKV1D-43A0A0B4J1Z2 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
IGKV1D-43A0A0B4J1Z2 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
IGKV1D-43A0A0B4J1Z2 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
IGKV1D-43A0A0B4J1Z2 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
IGKV1D-43A0A0B4J1Z2 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
IGKV1D-43A0A0B4J1Z2 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
IGKV1D-43A0A0B4J1Z2 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
IGKV1D-43A0A0B4J1Z2 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
IGKV1D-43A0A0B4J1Z2 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
IGKV1D-43A0A0B4J1Z2 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
IGKV1D-43A0A0B4J1Z2 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
IGKV1D-43A0A0B4J1Z2 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.14■□□□□ 0.5
IGKV1D-43A0A0B4J1Z2 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
IGKV1D-43A0A0B4J1Z2 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.14■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.14■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.14■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.14■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 AC011767.1-201ENST00000617410 1153 ntBASIC18.14■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.14■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.14■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.14■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.14■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 AL391422.3-201ENST00000603791 2761 ntBASIC18.13■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.13■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 AC006015.1-201ENST00000429970 570 ntBASIC18.13■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 MIR2861-201ENST00000636310 90 ntBASIC18.13■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.13■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.13■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 AL512408.1-201ENST00000569378 2000 ntBASIC18.13■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.12■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.12■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.12■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.12■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.12■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.12■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 SLC25A24-204ENST00000569674 2357 ntBASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms