Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 CEP57-201ENST00000325486 3098 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
P04436 LINC00909-202ENST00000580048 3463 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
P04436 VWA5A-204ENST00000449321 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
P04436 SUN1-210ENST00000425407 3868 ntAPPRIS P3 TSL 5 BASIC8.48□□□□□ -1.05
P04436 GALNT8-201ENST00000252318 2380 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
P04436 MFN1-205ENST00000471841 5224 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
P04436 PTPN20-216ENST00000506080 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
P04436 FIGNL1-211ENST00000611938 3543 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
P04436 AP3B2-215ENST00000620652 3729 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
P04436 MIGA1-202ENST00000443751 6409 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
P04436 MERTK-202ENST00000409780 3189 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
P04436 SERPINA10-203ENST00000554173 2000 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
P04436 CAVIN4-201ENST00000307584 2615 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
P04436 SPRR3-202ENST00000331860 985 ntAPPRIS P2 TSL 3 BASIC8.48□□□□□ -1.05
P04436 AZI2-202ENST00000334100 943 ntTSL 3 BASIC8.48□□□□□ -1.05
P04436 SPACA9-201ENST00000350499 894 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
P04436 RMRP-202ENST00000363046 264 ntBASIC8.48□□□□□ -1.05
P04436 FCRLA-207ENST00000367950 823 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
P04436 TMEM254-203ENST00000372275 860 ntTSL 2 BASIC8.48□□□□□ -1.05
P04436 AC073610.3-201ENST00000398092 939 ntAPPRIS P1 TSL 3 BASIC8.48□□□□□ -1.05
P04436 AL121910.1-201ENST00000420710 500 ntTSL 3 BASIC8.48□□□□□ -1.05
P04436 UBE2E1-203ENST00000424381 1224 ntTSL 2 BASIC8.48□□□□□ -1.05
P04436 IQCF4-204ENST00000433169 414 ntTSL 3 BASIC8.48□□□□□ -1.05
P04436 AC011193.1-202ENST00000441287 323 ntTSL 3 BASIC8.48□□□□□ -1.05
P04436 LINC01738-201ENST00000454285 815 ntTSL 3 BASIC8.48□□□□□ -1.05
P04436 AC022701.1-201ENST00000462935 622 ntBASIC8.48□□□□□ -1.05
P04436 UBE2E1-206ENST00000467766 585 ntTSL 2 BASIC8.48□□□□□ -1.05
P04436 AC080013.1-205ENST00000477589 1087 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
P04436 AC130651.1-201ENST00000482912 598 ntBASIC8.48□□□□□ -1.05
P04436 RN7SL78P-201ENST00000495193 281 ntBASIC8.48□□□□□ -1.05
P04436 PRPS1L1-201ENST00000506618 1090 ntAPPRIS ALT2 BASIC8.48□□□□□ -1.05
P04436 AC010343.3-201ENST00000512323 446 ntTSL 3 BASIC8.48□□□□□ -1.05
P04436 AC022034.4-201ENST00000521930 469 ntTSL 3 BASIC8.48□□□□□ -1.05
P04436 AC091946.1-201ENST00000522350 852 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
P04436 MBP-228ENST00000527041 582 ntTSL 5 BASIC8.48□□□□□ -1.05
P04436 AP003532.1-201ENST00000529936 310 ntBASIC8.48□□□□□ -1.05
P04436 AC087798.1-201ENST00000547882 534 ntTSL 5 BASIC8.48□□□□□ -1.05
P04436 LINC02327-206ENST00000551588 885 ntTSL 5 BASIC8.48□□□□□ -1.05
P04436 AC005225.3-201ENST00000555972 519 ntTSL 2 BASIC8.48□□□□□ -1.05
P04436 DRAIC-204ENST00000558781 1222 ntTSL 5 BASIC8.48□□□□□ -1.05
P04436 AC024267.6-202ENST00000579187 1103 ntBASIC8.48□□□□□ -1.05
P04436 MIR3650-201ENST00000581972 60 ntBASIC8.48□□□□□ -1.05
P04436 MIR4664-201ENST00000583819 71 ntBASIC8.48□□□□□ -1.05
P04436 AC010359.1-201ENST00000602982 507 ntBASIC8.48□□□□□ -1.05
P04436 AC004241.4-201ENST00000622792 1120 ntBASIC8.48□□□□□ -1.05
P04436 AP003400.4-201ENST00000623832 399 ntBASIC8.48□□□□□ -1.05
P04436 AP000590.1-201ENST00000624943 464 ntBASIC8.48□□□□□ -1.05
P04436 CDH13-210ENST00000567445 1456 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
P04436 LINC00243-201ENST00000399196 2052 ntTSL 2 BASIC8.48□□□□□ -1.05
P04436 ABLIM1-206ENST00000392952 6841 ntTSL 5 BASIC8.48□□□□□ -1.05
P04436 CDCA8-202ENST00000373055 2469 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
P04436 OR11A1-202ENST00000377148 2482 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
P04436 COL6A3-204ENST00000392003 3464 ntTSL 2 BASIC8.48□□□□□ -1.05
P04436 SPIN4-201ENST00000374884 4117 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
P04436 SLC19A3-201ENST00000258403 3105 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
P04436 ATP6AP1L-201ENST00000380167 2503 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
P04436 TTI2-206ENST00000613904 2516 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
P04436 ZNF157-201ENST00000377073 2318 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
P04436 BLACAT1-201ENST00000626538 2994 ntBASIC8.48□□□□□ -1.05
P04436 BDKRB2-203ENST00000554311 4040 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
P04436 ZNF239-201ENST00000306006 2389 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
P04436 MRPS11-201ENST00000325844 3644 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
P04436 SDK2-201ENST00000392650 10723 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
P04436 PPIL2-203ENST00000406385 3875 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
P04436 AC117529.1-201ENST00000505789 2023 ntBASIC8.47□□□□□ -1.05
P04436 OPTN-205ENST00000378757 3321 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
P04436 AC244034.3-201ENST00000624347 3135 ntBASIC8.47□□□□□ -1.05
P04436 FAM149B1P1-201ENST00000533428 1610 ntBASIC8.47□□□□□ -1.05
P04436 PNPLA1-202ENST00000388715 2332 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
P04436 FNDC3A-206ENST00000541916 6328 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
P04436 ABLIM3-205ENST00000504238 2774 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
P04436 C7orf55-LUC7L2-201ENST00000541515 1661 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
P04436 LCA5L-202ENST00000358268 2564 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
P04436 ITGA6-207ENST00000458358 3261 ntTSL 5 BASIC8.47□□□□□ -1.05
P04436 PARP8-219ENST00000514067 2829 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
P04436 TCF4-240ENST00000568673 2398 ntTSL 5 BASIC8.47□□□□□ -1.05
P04436 BARD1-213ENST00000619009 3967 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
P04436 BBS7-201ENST00000264499 3752 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
P04436 FAM107B-206ENST00000378470 3316 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
P04436 ACSM6-202ENST00000341686 1712 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
P04436 AC100788.2-201ENST00000625199 2889 ntBASIC8.47□□□□□ -1.05
P04436 MAP4K4-220ENST00000627726 3135 ntTSL 5 BASIC8.47□□□□□ -1.05
P04436 RAET1E-201ENST00000357183 958 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
P04436 RN7SKP294-201ENST00000362770 338 ntBASIC8.47□□□□□ -1.05
P04436 RNA5SP452-201ENST00000363004 119 ntBASIC8.47□□□□□ -1.05
P04436 LCN1P1-201ENST00000372031 505 ntBASIC8.47□□□□□ -1.05
P04436 RPL11-201ENST00000374550 634 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
P04436 EIF3KP2-201ENST00000415266 626 ntBASIC8.47□□□□□ -1.05
P04436 AL355490.2-201ENST00000422848 548 ntTSL 3 BASIC8.47□□□□□ -1.05
P04436 AKR1B1P1-201ENST00000429105 956 ntBASIC8.47□□□□□ -1.05
P04436 AC136896.1-201ENST00000438334 547 ntBASIC8.47□□□□□ -1.05
P04436 HNRNPA1P39-201ENST00000440547 960 ntBASIC8.47□□□□□ -1.05
P04436 AC073465.3-201ENST00000448468 405 ntBASIC8.47□□□□□ -1.05
P04436 OR11Q1P-201ENST00000451582 877 ntBASIC8.47□□□□□ -1.05
P04436 AL592043.2-201ENST00000454146 743 ntBASIC8.47□□□□□ -1.05
P04436 AC092610.1-201ENST00000454916 373 ntBASIC8.47□□□□□ -1.05
P04436 AL445673.1-201ENST00000455124 416 ntTSL 3 BASIC8.47□□□□□ -1.05
P04436 CREB3L2-205ENST00000458726 776 ntTSL 3 BASIC8.47□□□□□ -1.05
P04436 AC020658.1-201ENST00000471253 938 ntBASIC8.47□□□□□ -1.05
P04436 RN7SL507P-201ENST00000474076 296 ntBASIC8.47□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms