RNA–Protein interactions for RNA: ENST00000378757.6

OPTN-205, Transcript of optineurin, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene OPTN, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-205ENST00000378757 NISCHQ9Y2I1 1504 aa20.05■□□□□ 0.8
OPTN-205ENST00000378757 CCDC180Q9P1Z9 1646 aa17.25■□□□□ 0.35
OPTN-205ENST00000378757 SHROOM4Q9ULL8 1493 aa17.24■□□□□ 0.35
OPTN-205ENST00000378757 DCAF8L2P0C7V8 631 aa17.2■□□□□ 0.34
OPTN-205ENST00000378757 SUPT5HO00267 1087 aaKnown RBP16.95■□□□□ 0.3
OPTN-205ENST00000378757 ZCCHC6Q5VYS8 1495 aaKnown RBP16.91■□□□□ 0.3
OPTN-205ENST00000378757 DCAF1Q9Y4B6 1507 aa16.48■□□□□ 0.23
OPTN-205ENST00000378757 ABCC9O60706 1549 aa16.17■□□□□ 0.18
OPTN-205ENST00000378757 MYO15BQ96JP2 1530 aa16.13■□□□□ 0.17
OPTN-205ENST00000378757 SCRIBQ14160 1630 aa16.07■□□□□ 0.16
OPTN-205ENST00000378757 CHIC1Q5VXU3 224 aa16.02■□□□□ 0.16
OPTN-205ENST00000378757 NACADO15069 1562 aa15.98■□□□□ 0.15
OPTN-205ENST00000378757 EHMT2Q96KQ7 1210 aa15.94■□□□□ 0.14
OPTN-205ENST00000378757 LOC105371045A0A1W2PR82 267 aa15.83■□□□□ 0.13
OPTN-205ENST00000378757 FAM9AQ8IZU1 332 aaPredicted RBP15.8■□□□□ 0.12
OPTN-205ENST00000378757 RB1CC1Q8TDY2 1594 aa15.78■□□□□ 0.12
OPTN-205ENST00000378757 PCGF6Q9BYE7 350 aa15.77■□□□□ 0.12
OPTN-205ENST00000378757 RSF1Q96T23 1441 aaPredicted RBP15.72■□□□□ 0.11
OPTN-205ENST00000378757 UNC13AQ9UPW8 1703 aa15.7■□□□□ 0.1
OPTN-205ENST00000378757 CECR2Q9BXF3 1484 aa15.67■□□□□ 0.1
OPTN-205ENST00000378757 TRIM41Q8WV44 630 aa15.6■□□□□ 0.09
OPTN-205ENST00000378757 MROH2BQ7Z745 1585 aa15.59■□□□□ 0.09
OPTN-205ENST00000378757 WIZO95785 1651 aa15.51■□□□□ 0.07
OPTN-205ENST00000378757 BICRAQ9NZM4 1560 aa15.46■□□□□ 0.07
OPTN-205ENST00000378757 PPARGC1BQ86YN6 1023 aaKnown RBP15.42■□□□□ 0.06
OPTN-205ENST00000378757 BAZ1AQ9NRL2 1556 aaPredicted RBP15.4■□□□□ 0.06
OPTN-205ENST00000378757 PABPN1Q86U42 306 aaKnown RBP eCLIP15.39■□□□□ 0.057e-9■□□□□ 10
OPTN-205ENST00000378757 SMARCA4P51532 1647 aa15.36■□□□□ 0.05
OPTN-205ENST00000378757 HRCP23327 699 aa15.35■□□□□ 0.05
OPTN-205ENST00000378757 TTBK1Q5TCY1 1321 aaPredicted RBP15.34■□□□□ 0.05
OPTN-205ENST00000378757 TOP2AP11388 1531 aaKnown RBP15.22■□□□□ 0.03
OPTN-205ENST00000378757 EIF4G1Q04637 1599 aaKnown RBP15.21■□□□□ 0.03
OPTN-205ENST00000378757 AEBP2Q6ZN18 517 aaPredicted RBP15.21■□□□□ 0.03
OPTN-205ENST00000378757 TRIM26Q12899 539 aaPredicted RBP15.18■□□□□ 0.02
OPTN-205ENST00000378757 SMARCA2P51531 1590 aa15.16■□□□□ 0.02
OPTN-205ENST00000378757 CCDC88BA6NC98 1476 aa15.14■□□□□ 0.01
OPTN-205ENST00000378757 PEG3Q9GZU2 1588 aa15.12■□□□□ 0.01
OPTN-205ENST00000378757 RANGAP1P46060 587 aaPredicted RBP15.1■□□□□ 0.01
OPTN-205ENST00000378757 UBTFP17480 764 aaKnown RBP15.02■□□□□ -0
OPTN-205ENST00000378757 ATAD2BQ9ULI0 1458 aa15.02□□□□□ -0.01
OPTN-205ENST00000378757 ABCC8Q09428 1581 aa15.01□□□□□ -0.01
OPTN-205ENST00000378757 BAZ1BQ9UIG0 1483 aaKnown RBP14.91□□□□□ -0.02
OPTN-205ENST00000378757 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.89□□□□□ -0.03
OPTN-205ENST00000378757 CCER1Q8TC90 406 aaPredicted RBP14.85□□□□□ -0.03
OPTN-205ENST00000378757 NCAPD3P42695 1498 aa14.78□□□□□ -0.04
OPTN-205ENST00000378757 SOGA1O94964 1423 aa14.77□□□□□ -0.04
OPTN-205ENST00000378757 HMGXB3Q12766 1538 aa14.77□□□□□ -0.04
OPTN-205ENST00000378757 CSRNP3Q8WYN3 585 aa14.77□□□□□ -0.05
OPTN-205ENST00000378757 SYNJ1O43426 1573 aa14.76□□□□□ -0.05
OPTN-205ENST00000378757 RUSC2Q8N2Y8 1516 aa14.76□□□□□ -0.05
OPTN-205ENST00000378757 WRNQ14191 1432 aaPredicted RBP eCLIP14.73□□□□□ -0.05
OPTN-205ENST00000378757 ZEB1P37275 1124 aaPredicted RBP14.72□□□□□ -0.05
OPTN-205ENST00000378757 HNRNPUL2Q1KMD3 747 aaKnown RBP14.68□□□□□ -0.06
OPTN-205ENST00000378757 APLP2Q06481 763 aa14.66□□□□□ -0.06
OPTN-205ENST00000378757 CC2D2AQ9P2K1 1620 aa14.63□□□□□ -0.07
OPTN-205ENST00000378757 TOP2BQ02880 1626 aa14.6□□□□□ -0.07
OPTN-205ENST00000378757 CEP162Q5TB80 1403 aa14.59□□□□□ -0.07
OPTN-205ENST00000378757 BIVM-ERCC5R4GMW8 1640 aa14.58□□□□□ -0.08
OPTN-205ENST00000378757 CFTRP13569 1480 aa14.58□□□□□ -0.08
OPTN-205ENST00000378757 EEA1Q15075 1411 aa14.55□□□□□ -0.08
OPTN-205ENST00000378757 PRDM2Q13029 1718 aa14.54□□□□□ -0.08
OPTN-205ENST00000378757 CUX1P39880 1505 aa14.54□□□□□ -0.08
OPTN-205ENST00000378757 ATP1B4Q9UN42 357 aaPredicted RBP14.49□□□□□ -0.09
OPTN-205ENST00000378757 TNIKQ9UKE5 1360 aa14.49□□□□□ -0.09
OPTN-205ENST00000378757 ITGAEP38570 1179 aa14.49□□□□□ -0.09
OPTN-205ENST00000378757 KIF21BO75037 1637 aa14.47□□□□□ -0.09
OPTN-205ENST00000378757 GOLGA3Q08378 1498 aa14.46□□□□□ -0.09
OPTN-205ENST00000378757 CADPSQ9ULU8 1353 aa14.44□□□□□ -0.1
OPTN-205ENST00000378757 RAPGEF2Q9Y4G8 1499 aa14.43□□□□□ -0.1
OPTN-205ENST00000378757 CEP164Q9UPV0 1460 aa14.42□□□□□ -0.1
OPTN-205ENST00000378757 CLIP1P30622 1438 aa14.39□□□□□ -0.11
OPTN-205ENST00000378757 DNAJC5BQ9UF47 199 aa14.38□□□□□ -0.11
OPTN-205ENST00000378757 P3H3Q8IVL6 736 aa14.37□□□□□ -0.11
OPTN-205ENST00000378757 YTHDC1Q96MU7 727 aaKnown RBP14.37□□□□□ -0.11
OPTN-205ENST00000378757 NESP48681 1621 aa14.37□□□□□ -0.11
OPTN-205ENST00000378757 DIEXFQ68CQ4 756 aaKnown RBP14.36□□□□□ -0.11
OPTN-205ENST00000378757 PRXQ9BXM0 1461 aa14.34□□□□□ -0.11
OPTN-205ENST00000378757 SLC24A1O60721 1099 aa14.31□□□□□ -0.12
OPTN-205ENST00000378757 FANCD2Q9BXW9 1451 aa14.31□□□□□ -0.12
OPTN-205ENST00000378757 FGD5Q6ZNL6 1462 aa14.29□□□□□ -0.12
OPTN-205ENST00000378757 ERICH3Q5RHP9 1530 aa14.28□□□□□ -0.12
OPTN-205ENST00000378757 KIF27Q86VH2 1401 aa14.27□□□□□ -0.12
OPTN-205ENST00000378757 KANK4Q5T7N3 995 aaPredicted RBP14.25□□□□□ -0.13
OPTN-205ENST00000378757 CUX2O14529 1486 aa14.23□□□□□ -0.13
OPTN-205ENST00000378757 DNMBPQ6XZF7 1577 aa14.21□□□□□ -0.13
OPTN-205ENST00000378757 LAMC3Q9Y6N6 1575 aa14.21□□□□□ -0.13
OPTN-205ENST00000378757 IGF1RP08069 1367 aa14.21□□□□□ -0.13
OPTN-205ENST00000378757 TOPBP1Q92547 1522 aa14.21□□□□□ -0.14
OPTN-205ENST00000378757 RAD54L2Q9Y4B4 1467 aa14.19□□□□□ -0.14
OPTN-205ENST00000378757 VPS8Q8N3P4 1428 aa14.19□□□□□ -0.14
OPTN-205ENST00000378757 URB2Q14146 1524 aaKnown RBP14.18□□□□□ -0.14
OPTN-205ENST00000378757 POLA1P09884 1462 aaPredicted RBP14.18□□□□□ -0.14
OPTN-205ENST00000378757 SCAF1Q9H7N4 1312 aaKnown RBP14.18□□□□□ -0.14
OPTN-205ENST00000378757 ARAP1Q96P48 1450 aa14.17□□□□□ -0.14
OPTN-205ENST00000378757 ZNF316A6NFI3 1004 aaPredicted RBP14.17□□□□□ -0.14
OPTN-205ENST00000378757 KIF21AQ7Z4S6 1674 aa14.17□□□□□ -0.14
OPTN-205ENST00000378757 FAM50AQ14320 339 aaKnown RBP14.17□□□□□ -0.14
OPTN-205ENST00000378757 NEUROD1Q13562 356 aa14.15□□□□□ -0.14
OPTN-205ENST00000378757 WDR97A6NE52 1622 aa14.13□□□□□ -0.15
OPTN-205ENST00000378757 ABCA10Q8WWZ4 1543 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms