RNA–Protein interactions for RNA: ENST00000620652.4

AP3B2-215, Transcript of adaptor related protein complex 3 subunit beta 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene AP3B2, Length 3,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B2-215ENST00000620652 NISCHQ9Y2I1 1504 aa20.09■□□□□ 0.81
AP3B2-215ENST00000620652 PELP1Q8IZL8 1130 aaKnown RBP17.99■□□□□ 0.47
AP3B2-215ENST00000620652 CCDC180Q9P1Z9 1646 aa17.55■□□□□ 0.4
AP3B2-215ENST00000620652 MYT1Q01538 1121 aa17.49■□□□□ 0.39
AP3B2-215ENST00000620652 HRCP23327 699 aa17.48■□□□□ 0.39
AP3B2-215ENST00000620652 SHROOM4Q9ULL8 1493 aa17.35■□□□□ 0.37
AP3B2-215ENST00000620652 DCAF8L2P0C7V8 631 aa17.34■□□□□ 0.37
AP3B2-215ENST00000620652 PPARGC1BQ86YN6 1023 aaKnown RBP17.25■□□□□ 0.35
AP3B2-215ENST00000620652 SCAF1Q9H7N4 1312 aaKnown RBP17.03■□□□□ 0.32
AP3B2-215ENST00000620652 SUPT5HO00267 1087 aaKnown RBP17.02■□□□□ 0.32
AP3B2-215ENST00000620652 ABCC9O60706 1549 aa16.91■□□□□ 0.3
AP3B2-215ENST00000620652 PCGF6Q9BYE7 350 aa16.89■□□□□ 0.29
AP3B2-215ENST00000620652 ZCCHC6Q5VYS8 1495 aaKnown RBP16.82■□□□□ 0.28
AP3B2-215ENST00000620652 TTBK1Q5TCY1 1321 aaPredicted RBP16.58■□□□□ 0.25
AP3B2-215ENST00000620652 BCL11AQ9H165 835 aa16.43■□□□□ 0.22
AP3B2-215ENST00000620652 DCAF1Q9Y4B6 1507 aa16.4■□□□□ 0.22
AP3B2-215ENST00000620652 NACADO15069 1562 aa16.4■□□□□ 0.22
AP3B2-215ENST00000620652 MYO15BQ96JP2 1530 aa16.39■□□□□ 0.21
AP3B2-215ENST00000620652 PRKCSHP14314 528 aaPredicted RBP16.38■□□□□ 0.21
AP3B2-215ENST00000620652 RB1CC1Q8TDY2 1594 aa16.38■□□□□ 0.21
AP3B2-215ENST00000620652 ACIN1Q9UKV3 1341 aaKnown RBP16.34■□□□□ 0.21
AP3B2-215ENST00000620652 GTF3C3Q9Y5Q9 886 aa16.34■□□□□ 0.21
AP3B2-215ENST00000620652 NEUROD1Q13562 356 aa16.31■□□□□ 0.2
AP3B2-215ENST00000620652 FAM9AQ8IZU1 332 aaPredicted RBP16.28■□□□□ 0.2
AP3B2-215ENST00000620652 UNC13AQ9UPW8 1703 aa16.23■□□□□ 0.19
AP3B2-215ENST00000620652 SCRIBQ14160 1630 aa16.22■□□□□ 0.19
AP3B2-215ENST00000620652 CENPBP07199 599 aaPredicted RBP16.2■□□□□ 0.18
AP3B2-215ENST00000620652 EHMT2Q96KQ7 1210 aa16.17■□□□□ 0.18
AP3B2-215ENST00000620652 ZEB1P37275 1124 aaPredicted RBP16.09■□□□□ 0.17
AP3B2-215ENST00000620652 CHIC1Q5VXU3 224 aa16.03■□□□□ 0.16
AP3B2-215ENST00000620652 PABPN1Q86U42 306 aaKnown RBP eCLIP16.03■□□□□ 0.16
AP3B2-215ENST00000620652 BICRAQ9NZM4 1560 aa16.02■□□□□ 0.15
AP3B2-215ENST00000620652 TRIM26Q12899 539 aaPredicted RBP15.98■□□□□ 0.15
AP3B2-215ENST00000620652 LOC105371045A0A1W2PR82 267 aa15.96■□□□□ 0.15
AP3B2-215ENST00000620652 ERICH6Q7L0X2 663 aa15.91■□□□□ 0.14
AP3B2-215ENST00000620652 ANP32EQ9BTT0 268 aa15.85■□□□□ 0.13
AP3B2-215ENST00000620652 CSRNP3Q8WYN3 585 aa15.77■□□□□ 0.12
AP3B2-215ENST00000620652 CECR2Q9BXF3 1484 aa15.74■□□□□ 0.11
AP3B2-215ENST00000620652 APLP2Q06481 763 aa15.71■□□□□ 0.11
AP3B2-215ENST00000620652 RSF1Q96T23 1441 aaPredicted RBP15.7■□□□□ 0.1
AP3B2-215ENST00000620652 YTHDC1Q96MU7 727 aaKnown RBP15.7■□□□□ 0.1
AP3B2-215ENST00000620652 DIEXFQ68CQ4 756 aaKnown RBP15.68■□□□□ 0.1
AP3B2-215ENST00000620652 MROH2BQ7Z745 1585 aa15.59■□□□□ 0.09
AP3B2-215ENST00000620652 TRIM41Q8WV44 630 aa15.56■□□□□ 0.08
AP3B2-215ENST00000620652 DNAJC5BQ9UF47 199 aa15.56■□□□□ 0.08
AP3B2-215ENST00000620652 BAZ1AQ9NRL2 1556 aaPredicted RBP15.52■□□□□ 0.07
AP3B2-215ENST00000620652 EIF4G1Q04637 1599 aaKnown RBP15.5■□□□□ 0.07
AP3B2-215ENST00000620652 CC2D2AQ9P2K1 1620 aa15.43■□□□□ 0.06
AP3B2-215ENST00000620652 TSHZ2Q9NRE2 1034 aa15.43■□□□□ 0.06
AP3B2-215ENST00000620652 WIZO95785 1651 aa15.42■□□□□ 0.06
AP3B2-215ENST00000620652 SMARCA4P51532 1647 aa15.38■□□□□ 0.05
AP3B2-215ENST00000620652 ANO8Q9HCE9 1232 aaPredicted RBP15.38■□□□□ 0.05
AP3B2-215ENST00000620652 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.37■□□□□ 0.05
AP3B2-215ENST00000620652 CCER1Q8TC90 406 aaPredicted RBP15.36■□□□□ 0.05
AP3B2-215ENST00000620652 SUPT16HQ9Y5B9 1047 aaKnown RBP15.28■□□□□ 0.04
AP3B2-215ENST00000620652 RANGAP1P46060 587 aaPredicted RBP15.24■□□□□ 0.03
AP3B2-215ENST00000620652 BAZ1BQ9UIG0 1483 aaKnown RBP15.23■□□□□ 0.03
AP3B2-215ENST00000620652 ATAD2BQ9ULI0 1458 aa15.22■□□□□ 0.03
AP3B2-215ENST00000620652 TOP2AP11388 1531 aaKnown RBP15.21■□□□□ 0.03
AP3B2-215ENST00000620652 MIER1Q8N108 512 aa15.21■□□□□ 0.03
AP3B2-215ENST00000620652 PEG3Q9GZU2 1588 aa15.19■□□□□ 0.02
AP3B2-215ENST00000620652 CCDC88BA6NC98 1476 aa15.19■□□□□ 0.02
AP3B2-215ENST00000620652 SMARCA2P51531 1590 aa15.16■□□□□ 0.02
AP3B2-215ENST00000620652 ZNF316A6NFI3 1004 aaPredicted RBP15.13■□□□□ 0.01
AP3B2-215ENST00000620652 CCDC136Q96JN2 1154 aa15.13■□□□□ 0.01
AP3B2-215ENST00000620652 NCAPD3P42695 1498 aa15.11■□□□□ 0.01
AP3B2-215ENST00000620652 SALL2Q9Y467 1007 aaPredicted RBP15.09■□□□□ 0.01
AP3B2-215ENST00000620652 HMGXB3Q12766 1538 aa15.09■□□□□ 0.01
AP3B2-215ENST00000620652 BCANQ96GW7 911 aa15.05■□□□□ -0
AP3B2-215ENST00000620652 CLSPNQ9HAW4 1339 aa15.04■□□□□ -0
AP3B2-215ENST00000620652 UBE2Q2Q8WVN8 375 aa15.01□□□□□ -0.01
AP3B2-215ENST00000620652 RBM19Q9Y4C8 960 aaKnown RBP15.01□□□□□ -0.01
AP3B2-215ENST00000620652 UBTFP17480 764 aaKnown RBP15□□□□□ -0.01
AP3B2-215ENST00000620652 EIF5BO60841 1220 aaKnown RBP14.98□□□□□ -0.01
AP3B2-215ENST00000620652 DEKP35659 375 aaKnown RBP14.97□□□□□ -0.01
AP3B2-215ENST00000620652 MSH5O43196 834 aa14.95□□□□□ -0.02
AP3B2-215ENST00000620652 SLC24A1O60721 1099 aa14.95□□□□□ -0.02
AP3B2-215ENST00000620652 ABCC8Q09428 1581 aa14.93□□□□□ -0.02
AP3B2-215ENST00000620652 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.92□□□□□ -0.02
AP3B2-215ENST00000620652 WRNQ14191 1432 aaPredicted RBP eCLIP14.87□□□□□ -0.03
AP3B2-215ENST00000620652 RTN4Q9NQC3 1192 aaKnown RBP14.81□□□□□ -0.04
AP3B2-215ENST00000620652 MYT1LQ9UL68 1186 aa14.8□□□□□ -0.04
AP3B2-215ENST00000620652 FKBP8Q14318 412 aa14.79□□□□□ -0.04
AP3B2-215ENST00000620652 CADPSQ9ULU8 1353 aa14.79□□□□□ -0.04
AP3B2-215ENST00000620652 PLEKHG5O94827 1062 aa14.79□□□□□ -0.04
AP3B2-215ENST00000620652 ITGAEP38570 1179 aa14.78□□□□□ -0.04
AP3B2-215ENST00000620652 ERICH6BQ5W0A0 696 aa14.77□□□□□ -0.04
AP3B2-215ENST00000620652 SOGA1O94964 1423 aa14.77□□□□□ -0.04
AP3B2-215ENST00000620652 PKNOX2Q96KN3 472 aa14.76□□□□□ -0.05
AP3B2-215ENST00000620652 HNRNPUL2Q1KMD3 747 aaKnown RBP14.74□□□□□ -0.05
AP3B2-215ENST00000620652 RUSC2Q8N2Y8 1516 aa14.73□□□□□ -0.05
AP3B2-215ENST00000620652 LAMC3Q9Y6N6 1575 aa14.73□□□□□ -0.05
AP3B2-215ENST00000620652 CFTRP13569 1480 aa14.73□□□□□ -0.05
AP3B2-215ENST00000620652 NESP48681 1621 aa14.71□□□□□ -0.05
AP3B2-215ENST00000620652 IL27Q8NEV9 243 aa14.7□□□□□ -0.06
AP3B2-215ENST00000620652 NBR1Q14596 966 aa14.69□□□□□ -0.06
AP3B2-215ENST00000620652 PRDM2Q13029 1718 aa14.66□□□□□ -0.06
AP3B2-215ENST00000620652 KIF21AQ7Z4S6 1674 aa14.66□□□□□ -0.06
AP3B2-215ENST00000620652 SYNJ1O43426 1573 aa14.64□□□□□ -0.07
AP3B2-215ENST00000620652 FANCIQ9NVI1 1328 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 191.1 ms