RNA–Protein interactions for RNA: ENST00000622792.1

AC004241.4-201, humanhuman

BASIC

Gene AC004241.4, Length 1,120 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004241.4-201ENST00000622792 AEBP2Q6ZN18 517 aaPredicted RBP25.92■■□□□ 1.74
AC004241.4-201ENST00000622792 CHIC1Q5VXU3 224 aa24.47■■□□□ 1.51
AC004241.4-201ENST00000622792 NISCHQ9Y2I1 1504 aa22.15■■□□□ 1.14
AC004241.4-201ENST00000622792 SENP3Q9H4L4 574 aaPredicted RBP21.97■■□□□ 1.11
AC004241.4-201ENST00000622792 PHF23Q9BUL5 403 aaPredicted RBP21.74■■□□□ 1.07
AC004241.4-201ENST00000622792 FOXD1Q16676 465 aa20.58■□□□□ 0.89
AC004241.4-201ENST00000622792 ABCC9O60706 1549 aa19.92■□□□□ 0.78
AC004241.4-201ENST00000622792 CCDC180Q9P1Z9 1646 aa19.58■□□□□ 0.73
AC004241.4-201ENST00000622792 PLPPR3Q6T4P5 718 aa19.45■□□□□ 0.7
AC004241.4-201ENST00000622792 DNAJC5BQ9UF47 199 aa19.36■□□□□ 0.69
AC004241.4-201ENST00000622792 PPP6R1Q9UPN7 881 aa19.25■□□□□ 0.67
AC004241.4-201ENST00000622792 MSH5O43196 834 aa19.18■□□□□ 0.66
AC004241.4-201ENST00000622792 ADRA2BP18089 450 aa19.12■□□□□ 0.65
AC004241.4-201ENST00000622792 PIAS4Q8N2W9 510 aaPredicted RBP19.11■□□□□ 0.65
AC004241.4-201ENST00000622792 POTEDQ86YR6 584 aa18.92■□□□□ 0.62
AC004241.4-201ENST00000622792 RB1CC1Q8TDY2 1594 aa18.64■□□□□ 0.57
AC004241.4-201ENST00000622792 ZCCHC6Q5VYS8 1495 aaKnown RBP18.52■□□□□ 0.55
AC004241.4-201ENST00000622792 PABPN1Q86U42 306 aaKnown RBP eCLIP18.43■□□□□ 0.54
AC004241.4-201ENST00000622792 DCAF1Q9Y4B6 1507 aa18.37■□□□□ 0.53
AC004241.4-201ENST00000622792 MYO15BQ96JP2 1530 aa18.34■□□□□ 0.53
AC004241.4-201ENST00000622792 NACADO15069 1562 aa18.34■□□□□ 0.53
AC004241.4-201ENST00000622792 DCAF8L2P0C7V8 631 aa18.28■□□□□ 0.52
AC004241.4-201ENST00000622792 UNC13AQ9UPW8 1703 aa18.26■□□□□ 0.51
AC004241.4-201ENST00000622792 DNAJC5Q9H3Z4 198 aa18.26■□□□□ 0.51
AC004241.4-201ENST00000622792 BICRAQ9NZM4 1560 aa18.17■□□□□ 0.5
AC004241.4-201ENST00000622792 CECR2Q9BXF3 1484 aa18.01■□□□□ 0.47
AC004241.4-201ENST00000622792 CC2D2AQ9P2K1 1620 aa17.97■□□□□ 0.47
AC004241.4-201ENST00000622792 SCRIBQ14160 1630 aa17.86■□□□□ 0.45
AC004241.4-201ENST00000622792 SHROOM4Q9ULL8 1493 aa17.8■□□□□ 0.44
AC004241.4-201ENST00000622792 EIF4G1Q04637 1599 aaKnown RBP17.75■□□□□ 0.43
AC004241.4-201ENST00000622792 MAPK8IP2Q13387 824 aaPredicted RBP17.61■□□□□ 0.41
AC004241.4-201ENST00000622792 DMRT2Q9Y5R5 561 aa17.47■□□□□ 0.39
AC004241.4-201ENST00000622792 CUX2O14529 1486 aa17.45■□□□□ 0.38
AC004241.4-201ENST00000622792 SCAF1Q9H7N4 1312 aaKnown RBP17.36■□□□□ 0.37
AC004241.4-201ENST00000622792 ERCC6Q03468 1493 aa17.23■□□□□ 0.35
AC004241.4-201ENST00000622792 TRIM41Q8WV44 630 aa17.14■□□□□ 0.33
AC004241.4-201ENST00000622792 BAZ1AQ9NRL2 1556 aaPredicted RBP17.14■□□□□ 0.33
AC004241.4-201ENST00000622792 SMARCA4P51532 1647 aa17.13■□□□□ 0.33
AC004241.4-201ENST00000622792 MROH2BQ7Z745 1585 aa17.07■□□□□ 0.32
AC004241.4-201ENST00000622792 PPP4R3CPQ6ZMV5 832 aa17.07■□□□□ 0.32
AC004241.4-201ENST00000622792 PEG3Q9GZU2 1588 aa16.98■□□□□ 0.31
AC004241.4-201ENST00000622792 ATAD2BQ9ULI0 1458 aa16.97■□□□□ 0.31
AC004241.4-201ENST00000622792 RSF1Q96T23 1441 aaPredicted RBP16.96■□□□□ 0.31
AC004241.4-201ENST00000622792 NCAPD3P42695 1498 aa16.95■□□□□ 0.3
AC004241.4-201ENST00000622792 SMARCA2P51531 1590 aa16.94■□□□□ 0.3
AC004241.4-201ENST00000622792 NESP48681 1621 aa16.93■□□□□ 0.3
AC004241.4-201ENST00000622792 WIZO95785 1651 aa16.91■□□□□ 0.3
AC004241.4-201ENST00000622792 THOC2Q8NI27 1593 aaKnown RBP16.89■□□□□ 0.3
AC004241.4-201ENST00000622792 HMGXB3Q12766 1538 aa16.86■□□□□ 0.29
AC004241.4-201ENST00000622792 HOXD11P31277 338 aaPredicted RBP16.83■□□□□ 0.28
AC004241.4-201ENST00000622792 BAZ1BQ9UIG0 1483 aaKnown RBP16.8■□□□□ 0.28
AC004241.4-201ENST00000622792 CNKSR2Q8WXI2 1034 aa16.75■□□□□ 0.27
AC004241.4-201ENST00000622792 TOP2AP11388 1531 aaKnown RBP16.74■□□□□ 0.27
AC004241.4-201ENST00000622792 KIF21AQ7Z4S6 1674 aa16.69■□□□□ 0.26
AC004241.4-201ENST00000622792 LAMC3Q9Y6N6 1575 aa16.68■□□□□ 0.26
AC004241.4-201ENST00000622792 SUPT5HO00267 1087 aaKnown RBP16.67■□□□□ 0.26
AC004241.4-201ENST00000622792 RNF216Q9NWF9 866 aaPredicted RBP16.64■□□□□ 0.25
AC004241.4-201ENST00000622792 DCAF8L1A6NGE4 600 aa16.59■□□□□ 0.25
AC004241.4-201ENST00000622792 PDS5BQ9NTI5 1447 aa16.59■□□□□ 0.25
AC004241.4-201ENST00000622792 CCDC88BA6NC98 1476 aa16.54■□□□□ 0.24
AC004241.4-201ENST00000622792 OSCARQ8IYS5 282 aa16.53■□□□□ 0.24
AC004241.4-201ENST00000622792 MRC2Q9UBG0 1479 aa16.5■□□□□ 0.23
AC004241.4-201ENST00000622792 WDR62O43379 1518 aa16.5■□□□□ 0.23
AC004241.4-201ENST00000622792 CACNB1Q02641 598 aaPredicted RBP16.47■□□□□ 0.23
AC004241.4-201ENST00000622792 RNF39Q9H2S5 420 aa16.45■□□□□ 0.22
AC004241.4-201ENST00000622792 RIMBP3CA6NJZ7 1639 aa16.42■□□□□ 0.22
AC004241.4-201ENST00000622792 RIMBP3BA6NNM3 1639 aa16.42■□□□□ 0.22
AC004241.4-201ENST00000622792 RIMBP3Q9UFD9 1639 aa16.42■□□□□ 0.22
AC004241.4-201ENST00000622792 CADPSQ9ULU8 1353 aa16.42■□□□□ 0.22
AC004241.4-201ENST00000622792 CFTRP13569 1480 aa16.39■□□□□ 0.21
AC004241.4-201ENST00000622792 PRDM2Q13029 1718 aa16.33■□□□□ 0.21
AC004241.4-201ENST00000622792 NCBP3Q53F19 620 aaKnown RBP16.3■□□□□ 0.2
AC004241.4-201ENST00000622792 ARHGEF11O15085 1522 aa16.29■□□□□ 0.2
AC004241.4-201ENST00000622792 CEP164Q9UPV0 1460 aa16.29■□□□□ 0.2
AC004241.4-201ENST00000622792 TRHP20396 242 aaPredicted RBP16.23■□□□□ 0.19
AC004241.4-201ENST00000622792 FANCD2Q9BXW9 1451 aa16.22■□□□□ 0.19
AC004241.4-201ENST00000622792 CYB5RLQ6IPT4 315 aa16.2■□□□□ 0.18
AC004241.4-201ENST00000622792 NPM3O75607 178 aaKnown RBP16.19■□□□□ 0.18
AC004241.4-201ENST00000622792 URB2Q14146 1524 aaKnown RBP16.14■□□□□ 0.18
AC004241.4-201ENST00000622792 C1QBPQ07021 282 aaKnown RBP16.14■□□□□ 0.17
AC004241.4-201ENST00000622792 ARAP1Q96P48 1450 aa16.09■□□□□ 0.17
AC004241.4-201ENST00000622792 ZNF608Q9ULD9 1512 aaPredicted RBP16.06■□□□□ 0.16
AC004241.4-201ENST00000622792 ABCC8Q09428 1581 aa16.02■□□□□ 0.16
AC004241.4-201ENST00000622792 DNMBPQ6XZF7 1577 aa16.01■□□□□ 0.15
AC004241.4-201ENST00000622792 TOPBP1Q92547 1522 aa16.01■□□□□ 0.15
AC004241.4-201ENST00000622792 CUX1P39880 1505 aa15.99■□□□□ 0.15
AC004241.4-201ENST00000622792 IFT140Q96RY7 1462 aa15.98■□□□□ 0.15
AC004241.4-201ENST00000622792 WRNQ14191 1432 aaPredicted RBP eCLIP15.97■□□□□ 0.15
AC004241.4-201ENST00000622792 BIVM-ERCC5R4GMW8 1640 aa15.95■□□□□ 0.14
AC004241.4-201ENST00000622792 CHD1O14646 1710 aa15.95■□□□□ 0.14
AC004241.4-201ENST00000622792 SYNJ1O43426 1573 aa15.95■□□□□ 0.14
AC004241.4-201ENST00000622792 TOP2BQ02880 1626 aa15.94■□□□□ 0.14
AC004241.4-201ENST00000622792 EIF4G3O43432 1585 aaKnown RBP15.92■□□□□ 0.14
AC004241.4-201ENST00000622792 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.9■□□□□ 0.14
AC004241.4-201ENST00000622792 POLA1P09884 1462 aaPredicted RBP15.89■□□□□ 0.13
AC004241.4-201ENST00000622792 FGD5Q6ZNL6 1462 aa15.88■□□□□ 0.13
AC004241.4-201ENST00000622792 TARBP1Q13395 1621 aaKnown RBP15.83■□□□□ 0.13
AC004241.4-201ENST00000622792 FBLN2P98095 1184 aa15.82■□□□□ 0.12
AC004241.4-201ENST00000622792 AQRO60306 1485 aaKnown RBP eCLIP15.82■□□□□ 0.12
AC004241.4-201ENST00000622792 SOGA1O94964 1423 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms