RNA–Protein interactions for RNA: ENST00000363046.1

RMRP-202, Transcript of RNA component of mitochondrial RNA processing endoribonuclease, humanhuman

BASIC

Gene RMRP, Length 264 nt, Biotype ribozyme, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMRP-202ENST00000363046 NISCHQ9Y2I1 1504 aa20.52■□□□□ 0.87
RMRP-202ENST00000363046 CCDC180Q9P1Z9 1646 aa17.86■□□□□ 0.45
RMRP-202ENST00000363046 ZCCHC6Q5VYS8 1495 aaKnown RBP17.37■□□□□ 0.37
RMRP-202ENST00000363046 DCAF1Q9Y4B6 1507 aa17.11■□□□□ 0.33
RMRP-202ENST00000363046 SHROOM4Q9ULL8 1493 aa16.83■□□□□ 0.28
RMRP-202ENST00000363046 MYO15BQ96JP2 1530 aa16.74■□□□□ 0.27
RMRP-202ENST00000363046 SUPT5HO00267 1087 aaKnown RBP16.48■□□□□ 0.23
RMRP-202ENST00000363046 DCAF8L2P0C7V8 631 aa16.48■□□□□ 0.23
RMRP-202ENST00000363046 NACADO15069 1562 aa16.42■□□□□ 0.22
RMRP-202ENST00000363046 ABCC9O60706 1549 aa16.41■□□□□ 0.22
RMRP-202ENST00000363046 SCRIBQ14160 1630 aa16.25■□□□□ 0.19
RMRP-202ENST00000363046 RB1CC1Q8TDY2 1594 aa16.13■□□□□ 0.17
RMRP-202ENST00000363046 CHIC1Q5VXU3 224 aa16.12■□□□□ 0.17
RMRP-202ENST00000363046 RSF1Q96T23 1441 aaPredicted RBP16.03■□□□□ 0.16
RMRP-202ENST00000363046 BAZ1AQ9NRL2 1556 aaPredicted RBP15.87■□□□□ 0.13
RMRP-202ENST00000363046 UNC13AQ9UPW8 1703 aa15.82■□□□□ 0.12
RMRP-202ENST00000363046 MROH2BQ7Z745 1585 aa15.79■□□□□ 0.12
RMRP-202ENST00000363046 CECR2Q9BXF3 1484 aa15.74■□□□□ 0.11
RMRP-202ENST00000363046 WIZO95785 1651 aa15.73■□□□□ 0.11
RMRP-202ENST00000363046 SMARCA4P51532 1647 aa15.7■□□□□ 0.1
RMRP-202ENST00000363046 TOP2AP11388 1531 aaKnown RBP15.68■□□□□ 0.1
RMRP-202ENST00000363046 EIF4G1Q04637 1599 aaKnown RBP15.62■□□□□ 0.09
RMRP-202ENST00000363046 TRIM41Q8WV44 630 aa15.57■□□□□ 0.08
RMRP-202ENST00000363046 PEG3Q9GZU2 1588 aa15.55■□□□□ 0.08
RMRP-202ENST00000363046 BICRAQ9NZM4 1560 aa15.52■□□□□ 0.07
RMRP-202ENST00000363046 SMARCA2P51531 1590 aa15.49■□□□□ 0.07
RMRP-202ENST00000363046 HRCP23327 699 aa15.45■□□□□ 0.06
RMRP-202ENST00000363046 CCDC88BA6NC98 1476 aa15.39■□□□□ 0.05
RMRP-202ENST00000363046 LOC105371045A0A1W2PR82 267 aa15.38■□□□□ 0.05
RMRP-202ENST00000363046 TRIM26Q12899 539 aaPredicted RBP15.36■□□□□ 0.05
RMRP-202ENST00000363046 EEA1Q15075 1411 aa15.35■□□□□ 0.05
RMRP-202ENST00000363046 PCGF6Q9BYE7 350 aa15.34■□□□□ 0.05
RMRP-202ENST00000363046 ATAD2BQ9ULI0 1458 aa15.22■□□□□ 0.03
RMRP-202ENST00000363046 BAZ1BQ9UIG0 1483 aaKnown RBP15.21■□□□□ 0.03
RMRP-202ENST00000363046 ABCC8Q09428 1581 aa15.21■□□□□ 0.03
RMRP-202ENST00000363046 ZEB1P37275 1124 aaPredicted RBP15.18■□□□□ 0.02
RMRP-202ENST00000363046 HMGXB3Q12766 1538 aa15.17■□□□□ 0.02
RMRP-202ENST00000363046 WRNQ14191 1432 aaPredicted RBP eCLIP15.13■□□□□ 0.01
RMRP-202ENST00000363046 FAM9AQ8IZU1 332 aaPredicted RBP15.13■□□□□ 0.01
RMRP-202ENST00000363046 KIF21BO75037 1637 aa15.11■□□□□ 0.01
RMRP-202ENST00000363046 PABPN1Q86U42 306 aaKnown RBP eCLIP15.11■□□□□ 0.01
RMRP-202ENST00000363046 TNIKQ9UKE5 1360 aa15.09■□□□□ 0.01
RMRP-202ENST00000363046 GOLGA3Q08378 1498 aa15.08■□□□□ 0
RMRP-202ENST00000363046 PRDM2Q13029 1718 aa15.06■□□□□ 0
RMRP-202ENST00000363046 BIVM-ERCC5R4GMW8 1640 aa15.06■□□□□ 0
RMRP-202ENST00000363046 NCAPD3P42695 1498 aa15.05■□□□□ -0
RMRP-202ENST00000363046 TOP2BQ02880 1626 aa15.03■□□□□ -0
RMRP-202ENST00000363046 SYNJ1O43426 1573 aa15.03■□□□□ -0
RMRP-202ENST00000363046 CEP164Q9UPV0 1460 aa15.03■□□□□ -0
RMRP-202ENST00000363046 CEP162Q5TB80 1403 aa15□□□□□ -0.01
RMRP-202ENST00000363046 CSRNP3Q8WYN3 585 aa14.99□□□□□ -0.01
RMRP-202ENST00000363046 SOGA1O94964 1423 aa14.99□□□□□ -0.01
RMRP-202ENST00000363046 ERICH3Q5RHP9 1530 aa14.92□□□□□ -0.02
RMRP-202ENST00000363046 CFTRP13569 1480 aa14.86□□□□□ -0.03
RMRP-202ENST00000363046 RUSC2Q8N2Y8 1516 aa14.86□□□□□ -0.03
RMRP-202ENST00000363046 UBTFP17480 764 aaKnown RBP14.81□□□□□ -0.04
RMRP-202ENST00000363046 CLIP1P30622 1438 aa14.78□□□□□ -0.04
RMRP-202ENST00000363046 EHMT2Q96KQ7 1210 aa14.78□□□□□ -0.04
RMRP-202ENST00000363046 VPS8Q8N3P4 1428 aa14.77□□□□□ -0.04
RMRP-202ENST00000363046 CUX1P39880 1505 aa14.76□□□□□ -0.05
RMRP-202ENST00000363046 PPARGC1BQ86YN6 1023 aaKnown RBP14.75□□□□□ -0.05
RMRP-202ENST00000363046 PRXQ9BXM0 1461 aa14.75□□□□□ -0.05
RMRP-202ENST00000363046 KIF27Q86VH2 1401 aa14.74□□□□□ -0.05
RMRP-202ENST00000363046 RAPGEF2Q9Y4G8 1499 aa14.71□□□□□ -0.05
RMRP-202ENST00000363046 CC2D2AQ9P2K1 1620 aa14.66□□□□□ -0.06
RMRP-202ENST00000363046 CADPSQ9ULU8 1353 aa14.65□□□□□ -0.06
RMRP-202ENST00000363046 APLP2Q06481 763 aa14.62□□□□□ -0.07
RMRP-202ENST00000363046 CCER1Q8TC90 406 aaPredicted RBP14.61□□□□□ -0.07
RMRP-202ENST00000363046 DNMBPQ6XZF7 1577 aa14.57□□□□□ -0.08
RMRP-202ENST00000363046 LAMC3Q9Y6N6 1575 aa14.55□□□□□ -0.08
RMRP-202ENST00000363046 ARAP1Q96P48 1450 aa14.54□□□□□ -0.08
RMRP-202ENST00000363046 MAP3K1Q13233 1512 aa14.54□□□□□ -0.08
RMRP-202ENST00000363046 CUL7Q14999 1698 aa14.54□□□□□ -0.08
RMRP-202ENST00000363046 FGD5Q6ZNL6 1462 aa14.52□□□□□ -0.08
RMRP-202ENST00000363046 CUX2O14529 1486 aa14.51□□□□□ -0.09
RMRP-202ENST00000363046 FANCD2Q9BXW9 1451 aa14.5□□□□□ -0.09
RMRP-202ENST00000363046 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.49□□□□□ -0.09
RMRP-202ENST00000363046 ABCA10Q8WWZ4 1543 aa14.47□□□□□ -0.09
RMRP-202ENST00000363046 CLSPNQ9HAW4 1339 aa14.46□□□□□ -0.09
RMRP-202ENST00000363046 WDR97A6NE52 1622 aa14.46□□□□□ -0.09
RMRP-202ENST00000363046 EFCAB5A4FU69 1503 aa14.46□□□□□ -0.1
RMRP-202ENST00000363046 CTTNBP2Q8WZ74 1663 aa14.46□□□□□ -0.1
RMRP-202ENST00000363046 DNAJC5BQ9UF47 199 aa14.45□□□□□ -0.1
RMRP-202ENST00000363046 ARHGAP35Q9NRY4 1499 aa14.44□□□□□ -0.1
RMRP-202ENST00000363046 CFAP43Q8NDM7 1665 aa14.43□□□□□ -0.1
RMRP-202ENST00000363046 IGF1RP08069 1367 aa14.43□□□□□ -0.1
RMRP-202ENST00000363046 FHAD1B1AJZ9 1412 aa14.42□□□□□ -0.1
RMRP-202ENST00000363046 RRBP1Q9P2E9 1410 aaKnown RBP14.42□□□□□ -0.1
RMRP-202ENST00000363046 TOPBP1Q92547 1522 aa14.42□□□□□ -0.1
RMRP-202ENST00000363046 CARMIL1Q5VZK9 1371 aa14.41□□□□□ -0.1
RMRP-202ENST00000363046 TIAM1Q13009 1591 aa14.4□□□□□ -0.1
RMRP-202ENST00000363046 KIF21AQ7Z4S6 1674 aa14.37□□□□□ -0.11
RMRP-202ENST00000363046 POLA1P09884 1462 aaPredicted RBP14.37□□□□□ -0.11
RMRP-202ENST00000363046 ABCA5Q8WWZ7 1642 aa14.35□□□□□ -0.11
RMRP-202ENST00000363046 AQRO60306 1485 aaKnown RBP eCLIP14.35□□□□□ -0.11
RMRP-202ENST00000363046 TTBK1Q5TCY1 1321 aaPredicted RBP14.35□□□□□ -0.11
RMRP-202ENST00000363046 PDS5BQ9NTI5 1447 aa14.34□□□□□ -0.11
RMRP-202ENST00000363046 FYCO1Q9BQS8 1478 aa14.32□□□□□ -0.12
RMRP-202ENST00000363046 THOC2Q8NI27 1593 aaKnown RBP14.3□□□□□ -0.12
RMRP-202ENST00000363046 CCNB3Q8WWL7 1395 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms