RNA–Protein interactions for RNA: ENST00000580048.1

LINC00909-202, long intergenic non-protein coding RNA 909, humanhuman

TSL 1 (best) BASIC

Gene LINC00909, Length 3,463 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00909-202ENST00000580048 NISCHQ9Y2I1 1504 aa18.45■□□□□ 0.54
LINC00909-202ENST00000580048 HRCP23327 699 aa17.38■□□□□ 0.37
LINC00909-202ENST00000580048 PPARGC1BQ86YN6 1023 aaKnown RBP17.17■□□□□ 0.34
LINC00909-202ENST00000580048 PCGF6Q9BYE7 350 aa17.11■□□□□ 0.33
LINC00909-202ENST00000580048 SUPT5HO00267 1087 aaKnown RBP17.02■□□□□ 0.31
LINC00909-202ENST00000580048 PELP1Q8IZL8 1130 aaKnown RBP17.01■□□□□ 0.31
LINC00909-202ENST00000580048 SHROOM4Q9ULL8 1493 aa16.96■□□□□ 0.31
LINC00909-202ENST00000580048 MYO15BQ96JP2 1530 aa16.66■□□□□ 0.26
LINC00909-202ENST00000580048 CHIC1Q5VXU3 224 aa16.59■□□□□ 0.25
LINC00909-202ENST00000580048 SCAF1Q9H7N4 1312 aaKnown RBP16.59■□□□□ 0.25
LINC00909-202ENST00000580048 LOC105371045A0A1W2PR82 267 aa16.38■□□□□ 0.21
LINC00909-202ENST00000580048 MYT1Q01538 1121 aa16.37■□□□□ 0.21
LINC00909-202ENST00000580048 TRIM26Q12899 539 aaPredicted RBP16.35■□□□□ 0.21
LINC00909-202ENST00000580048 ZEB1P37275 1124 aaPredicted RBP16.25■□□□□ 0.19
LINC00909-202ENST00000580048 DCAF1Q9Y4B6 1507 aa16.25■□□□□ 0.19
LINC00909-202ENST00000580048 ACIN1Q9UKV3 1341 aaKnown RBP16.11■□□□□ 0.17
LINC00909-202ENST00000580048 NEUROD1Q13562 356 aa16.1■□□□□ 0.17
LINC00909-202ENST00000580048 GTF3C3Q9Y5Q9 886 aa16.09■□□□□ 0.17
LINC00909-202ENST00000580048 CCDC180Q9P1Z9 1646 aa16.03■□□□□ 0.16
LINC00909-202ENST00000580048 DCAF8L2P0C7V8 631 aa15.96■□□□□ 0.15
LINC00909-202ENST00000580048 CENPBP07199 599 aaPredicted RBP15.96■□□□□ 0.14
LINC00909-202ENST00000580048 EHMT2Q96KQ7 1210 aa15.9■□□□□ 0.14
LINC00909-202ENST00000580048 FAM9AQ8IZU1 332 aaPredicted RBP15.81■□□□□ 0.12
LINC00909-202ENST00000580048 DIEXFQ68CQ4 756 aaKnown RBP15.8■□□□□ 0.12
LINC00909-202ENST00000580048 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.79■□□□□ 0.12
LINC00909-202ENST00000580048 CCER1Q8TC90 406 aaPredicted RBP15.78■□□□□ 0.12
LINC00909-202ENST00000580048 YTHDC1Q96MU7 727 aaKnown RBP15.76■□□□□ 0.11
LINC00909-202ENST00000580048 ZCCHC6Q5VYS8 1495 aaKnown RBP15.69■□□□□ 0.1
LINC00909-202ENST00000580048 TRIM41Q8WV44 630 aa15.62■□□□□ 0.09
LINC00909-202ENST00000580048 TTBK1Q5TCY1 1321 aaPredicted RBP15.53■□□□□ 0.08
LINC00909-202ENST00000580048 BCL11AQ9H165 835 aa15.43■□□□□ 0.06
LINC00909-202ENST00000580048 ZNF316A6NFI3 1004 aaPredicted RBP15.4■□□□□ 0.06
LINC00909-202ENST00000580048 MIER1Q8N108 512 aa15.37■□□□□ 0.05
LINC00909-202ENST00000580048 ANP32EQ9BTT0 268 aa15.29■□□□□ 0.04
LINC00909-202ENST00000580048 CSRNP3Q8WYN3 585 aa15.19■□□□□ 0.02
LINC00909-202ENST00000580048 SUPT16HQ9Y5B9 1047 aaKnown RBP15.18■□□□□ 0.02
LINC00909-202ENST00000580048 TSHZ2Q9NRE2 1034 aa15.16■□□□□ 0.02
LINC00909-202ENST00000580048 HNRNPUL2Q1KMD3 747 aaKnown RBP15.06■□□□□ 0
LINC00909-202ENST00000580048 BCANQ96GW7 911 aa15.06■□□□□ 0
LINC00909-202ENST00000580048 RSF1Q96T23 1441 aaPredicted RBP15.03■□□□□ -0
LINC00909-202ENST00000580048 CLSPNQ9HAW4 1339 aa14.99□□□□□ -0.01
LINC00909-202ENST00000580048 RB1CC1Q8TDY2 1594 aa14.98□□□□□ -0.01
LINC00909-202ENST00000580048 ABCC9O60706 1549 aa14.92□□□□□ -0.02
LINC00909-202ENST00000580048 PRKCSHP14314 528 aaPredicted RBP14.88□□□□□ -0.03
LINC00909-202ENST00000580048 UBTFP17480 764 aaKnown RBP14.88□□□□□ -0.03
LINC00909-202ENST00000580048 FKBP8Q14318 412 aa14.85□□□□□ -0.03
LINC00909-202ENST00000580048 CEP162Q5TB80 1403 aa14.84□□□□□ -0.03
LINC00909-202ENST00000580048 RBM19Q9Y4C8 960 aaKnown RBP14.82□□□□□ -0.04
LINC00909-202ENST00000580048 WRNQ14191 1432 aaPredicted RBP eCLIP14.79□□□□□ -0.04
LINC00909-202ENST00000580048 ITGAEP38570 1179 aa14.78□□□□□ -0.04
LINC00909-202ENST00000580048 ERICH6Q7L0X2 663 aa14.77□□□□□ -0.04
LINC00909-202ENST00000580048 KCNH8Q96L42 1107 aa14.77□□□□□ -0.05
LINC00909-202ENST00000580048 NEFLP07196 543 aa14.75□□□□□ -0.05
LINC00909-202ENST00000580048 SCRIBQ14160 1630 aa14.7□□□□□ -0.06
LINC00909-202ENST00000580048 APLP2Q06481 763 aa14.69□□□□□ -0.06
LINC00909-202ENST00000580048 RANGAP1P46060 587 aaPredicted RBP14.69□□□□□ -0.06
LINC00909-202ENST00000580048 MSH5O43196 834 aa14.67□□□□□ -0.06
LINC00909-202ENST00000580048 TNIKQ9UKE5 1360 aa14.65□□□□□ -0.06
LINC00909-202ENST00000580048 SOGA1O94964 1423 aa14.6□□□□□ -0.07
LINC00909-202ENST00000580048 TRIM52Q96A61 297 aa14.59□□□□□ -0.07
LINC00909-202ENST00000580048 CCDC88BA6NC98 1476 aa14.59□□□□□ -0.07
LINC00909-202ENST00000580048 CECR2Q9BXF3 1484 aa14.57□□□□□ -0.08
LINC00909-202ENST00000580048 ABCC8Q09428 1581 aa14.55□□□□□ -0.08
LINC00909-202ENST00000580048 DEKP35659 375 aaKnown RBP14.54□□□□□ -0.08
LINC00909-202ENST00000580048 DDX10Q13206 875 aaKnown RBP14.54□□□□□ -0.08
LINC00909-202ENST00000580048 ANO8Q9HCE9 1232 aaPredicted RBP14.51□□□□□ -0.09
LINC00909-202ENST00000580048 MROH2BQ7Z745 1585 aa14.51□□□□□ -0.09
LINC00909-202ENST00000580048 IRX6P78412 446 aaPredicted RBP14.5□□□□□ -0.09
LINC00909-202ENST00000580048 CDK11AQ9UQ88 783 aaPredicted RBP14.5□□□□□ -0.09
LINC00909-202ENST00000580048 DHX57Q6P158 1386 aaKnown RBP14.5□□□□□ -0.09
LINC00909-202ENST00000580048 RUSC2Q8N2Y8 1516 aa14.49□□□□□ -0.09
LINC00909-202ENST00000580048 NBR1Q14596 966 aa14.46□□□□□ -0.09
LINC00909-202ENST00000580048 WIZO95785 1651 aa14.45□□□□□ -0.1
LINC00909-202ENST00000580048 FANCIQ9NVI1 1328 aa14.44□□□□□ -0.1
LINC00909-202ENST00000580048 GOLGA3Q08378 1498 aa14.44□□□□□ -0.1
LINC00909-202ENST00000580048 CLIP1P30622 1438 aa14.43□□□□□ -0.1
LINC00909-202ENST00000580048 HIRIP3Q9BW71 556 aaPredicted RBP14.42□□□□□ -0.1
LINC00909-202ENST00000580048 MYT1LQ9UL68 1186 aa14.4□□□□□ -0.1
LINC00909-202ENST00000580048 ANP32CO43423 234 aa14.37□□□□□ -0.11
LINC00909-202ENST00000580048 CCDC136Q96JN2 1154 aa14.36□□□□□ -0.11
LINC00909-202ENST00000580048 EEA1Q15075 1411 aa14.36□□□□□ -0.11
LINC00909-202ENST00000580048 SALL2Q9Y467 1007 aaPredicted RBP14.35□□□□□ -0.11
LINC00909-202ENST00000580048 VPS8Q8N3P4 1428 aa14.35□□□□□ -0.11
LINC00909-202ENST00000580048 RTN4Q9NQC3 1192 aaKnown RBP14.32□□□□□ -0.12
LINC00909-202ENST00000580048 HNRNPUQ00839 825 aaKnown RBP eCLIP14.31□□□□□ -0.12
LINC00909-202ENST00000580048 EIF4G1Q04637 1599 aaKnown RBP14.29□□□□□ -0.12
LINC00909-202ENST00000580048 KANK4Q5T7N3 995 aaPredicted RBP14.28□□□□□ -0.12
LINC00909-202ENST00000580048 RTL5Q5HYW3 569 aaPredicted RBP14.27□□□□□ -0.13
LINC00909-202ENST00000580048 NOP58Q9Y2X3 529 aaKnown RBP14.27□□□□□ -0.13
LINC00909-202ENST00000580048 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.26□□□□□ -0.13
LINC00909-202ENST00000580048 SIN3AQ96ST3 1273 aa14.26□□□□□ -0.13
LINC00909-202ENST00000580048 CEP164Q9UPV0 1460 aa14.25□□□□□ -0.13
LINC00909-202ENST00000580048 CCER2I3L3R5 266 aa14.24□□□□□ -0.13
LINC00909-202ENST00000580048 PPP1R15AO75807 674 aaPredicted RBP14.24□□□□□ -0.13
LINC00909-202ENST00000580048 PAK3O75914 559 aaPredicted RBP14.24□□□□□ -0.13
LINC00909-202ENST00000580048 BAZ1AQ9NRL2 1556 aaPredicted RBP14.24□□□□□ -0.13
LINC00909-202ENST00000580048 B4GALNT3Q6L9W6 998 aa14.24□□□□□ -0.13
LINC00909-202ENST00000580048 IL27Q8NEV9 243 aa14.22□□□□□ -0.13
LINC00909-202ENST00000580048 PPP4R2Q9NY27 417 aa14.19□□□□□ -0.14
LINC00909-202ENST00000580048 ERICH6BQ5W0A0 696 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms