RNA–Protein interactions for RNA: ENST00000567445.1

CDH13-210, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-210ENST00000567445 AEBP2Q6ZN18 517 aaPredicted RBP26.72■■□□□ 1.87
CDH13-210ENST00000567445 CHIC1Q5VXU3 224 aa25.62■■□□□ 1.69
CDH13-210ENST00000567445 NISCHQ9Y2I1 1504 aa22.93■■□□□ 1.26
CDH13-210ENST00000567445 SENP3Q9H4L4 574 aaPredicted RBP22.81■■□□□ 1.24
CDH13-210ENST00000567445 PHF23Q9BUL5 403 aaPredicted RBP22.54■■□□□ 1.2
CDH13-210ENST00000567445 FOXD1Q16676 465 aa21.2■□□□□ 0.98
CDH13-210ENST00000567445 PLPPR3Q6T4P5 718 aa20.59■□□□□ 0.89
CDH13-210ENST00000567445 CCDC180Q9P1Z9 1646 aa20.56■□□□□ 0.88
CDH13-210ENST00000567445 ABCC9O60706 1549 aa20.52■□□□□ 0.88
CDH13-210ENST00000567445 PPP6R1Q9UPN7 881 aa19.99■□□□□ 0.79
CDH13-210ENST00000567445 ADRA2BP18089 450 aa19.94■□□□□ 0.78
CDH13-210ENST00000567445 PIAS4Q8N2W9 510 aaPredicted RBP19.88■□□□□ 0.77
CDH13-210ENST00000567445 MSH5O43196 834 aa19.8■□□□□ 0.76
CDH13-210ENST00000567445 RB1CC1Q8TDY2 1594 aa19.56■□□□□ 0.72
CDH13-210ENST00000567445 NACADO15069 1562 aa19.43■□□□□ 0.7
CDH13-210ENST00000567445 DCAF8L2P0C7V8 631 aa19.34■□□□□ 0.69
CDH13-210ENST00000567445 DNAJC5BQ9UF47 199 aa19.21■□□□□ 0.67
CDH13-210ENST00000567445 MYO15BQ96JP2 1530 aa19.19■□□□□ 0.66
CDH13-210ENST00000567445 PABPN1Q86U42 306 aaKnown RBP eCLIP19.11■□□□□ 0.65
CDH13-210ENST00000567445 UNC13AQ9UPW8 1703 aa19.09■□□□□ 0.65
CDH13-210ENST00000567445 ZCCHC6Q5VYS8 1495 aaKnown RBP19.01■□□□□ 0.63
CDH13-210ENST00000567445 BICRAQ9NZM4 1560 aa18.97■□□□□ 0.63
CDH13-210ENST00000567445 DCAF1Q9Y4B6 1507 aa18.96■□□□□ 0.63
CDH13-210ENST00000567445 POTEDQ86YR6 584 aa18.92■□□□□ 0.62
CDH13-210ENST00000567445 SHROOM4Q9ULL8 1493 aa18.75■□□□□ 0.59
CDH13-210ENST00000567445 SCRIBQ14160 1630 aa18.73■□□□□ 0.59
CDH13-210ENST00000567445 CC2D2AQ9P2K1 1620 aa18.54■□□□□ 0.56
CDH13-210ENST00000567445 EIF4G1Q04637 1599 aaKnown RBP18.52■□□□□ 0.55
CDH13-210ENST00000567445 CECR2Q9BXF3 1484 aa18.49■□□□□ 0.55
CDH13-210ENST00000567445 SCAF1Q9H7N4 1312 aaKnown RBP18.32■□□□□ 0.52
CDH13-210ENST00000567445 MAPK8IP2Q13387 824 aaPredicted RBP18.24■□□□□ 0.51
CDH13-210ENST00000567445 DMRT2Q9Y5R5 561 aa18.11■□□□□ 0.49
CDH13-210ENST00000567445 PPP4R3CPQ6ZMV5 832 aa18.07■□□□□ 0.48
CDH13-210ENST00000567445 NCAPD3P42695 1498 aa17.95■□□□□ 0.46
CDH13-210ENST00000567445 ATAD2BQ9ULI0 1458 aa17.89■□□□□ 0.45
CDH13-210ENST00000567445 SMARCA4P51532 1647 aa17.87■□□□□ 0.45
CDH13-210ENST00000567445 SMARCA2P51531 1590 aa17.85■□□□□ 0.45
CDH13-210ENST00000567445 HMGXB3Q12766 1538 aa17.81■□□□□ 0.44
CDH13-210ENST00000567445 BAZ1AQ9NRL2 1556 aaPredicted RBP17.8■□□□□ 0.44
CDH13-210ENST00000567445 ERCC6Q03468 1493 aa17.72■□□□□ 0.43
CDH13-210ENST00000567445 BAZ1BQ9UIG0 1483 aaKnown RBP17.72■□□□□ 0.43
CDH13-210ENST00000567445 PEG3Q9GZU2 1588 aa17.71■□□□□ 0.43
CDH13-210ENST00000567445 CNKSR2Q8WXI2 1034 aa17.69■□□□□ 0.42
CDH13-210ENST00000567445 CUX2O14529 1486 aa17.68■□□□□ 0.42
CDH13-210ENST00000567445 MROH2BQ7Z745 1585 aa17.66■□□□□ 0.42
CDH13-210ENST00000567445 NESP48681 1621 aa17.63■□□□□ 0.41
CDH13-210ENST00000567445 DNAJC5Q9H3Z4 198 aa17.63■□□□□ 0.41
CDH13-210ENST00000567445 HOXD11P31277 338 aaPredicted RBP17.53■□□□□ 0.4
CDH13-210ENST00000567445 LAMC3Q9Y6N6 1575 aa17.53■□□□□ 0.4
CDH13-210ENST00000567445 NCBP3Q53F19 620 aaKnown RBP17.48■□□□□ 0.39
CDH13-210ENST00000567445 RNF216Q9NWF9 866 aaPredicted RBP17.48■□□□□ 0.39
CDH13-210ENST00000567445 THOC2Q8NI27 1593 aaKnown RBP17.45■□□□□ 0.38
CDH13-210ENST00000567445 WIZO95785 1651 aa17.44■□□□□ 0.38
CDH13-210ENST00000567445 PDS5BQ9NTI5 1447 aa17.44■□□□□ 0.38
CDH13-210ENST00000567445 CADPSQ9ULU8 1353 aa17.4■□□□□ 0.38
CDH13-210ENST00000567445 KIF21AQ7Z4S6 1674 aa17.4■□□□□ 0.38
CDH13-210ENST00000567445 DCAF8L1A6NGE4 600 aa17.37■□□□□ 0.37
CDH13-210ENST00000567445 RSF1Q96T23 1441 aaPredicted RBP17.32■□□□□ 0.36
CDH13-210ENST00000567445 MRC2Q9UBG0 1479 aa17.28■□□□□ 0.36
CDH13-210ENST00000567445 TOP2AP11388 1531 aaKnown RBP17.24■□□□□ 0.35
CDH13-210ENST00000567445 WDR62O43379 1518 aa17.23■□□□□ 0.35
CDH13-210ENST00000567445 CFTRP13569 1480 aa17.22■□□□□ 0.35
CDH13-210ENST00000567445 CEP164Q9UPV0 1460 aa17.22■□□□□ 0.35
CDH13-210ENST00000567445 FANCD2Q9BXW9 1451 aa17.2■□□□□ 0.34
CDH13-210ENST00000567445 NPM3O75607 178 aaKnown RBP17.18■□□□□ 0.34
CDH13-210ENST00000567445 URB2Q14146 1524 aaKnown RBP17.05■□□□□ 0.32
CDH13-210ENST00000567445 CCDC88BA6NC98 1476 aa17.04■□□□□ 0.32
CDH13-210ENST00000567445 PRDM2Q13029 1718 aa17.03■□□□□ 0.32
CDH13-210ENST00000567445 KCNA4P22459 653 aa17.02■□□□□ 0.32
CDH13-210ENST00000567445 OSCARQ8IYS5 282 aa16.89■□□□□ 0.29
CDH13-210ENST00000567445 RNF39Q9H2S5 420 aa16.89■□□□□ 0.29
CDH13-210ENST00000567445 TOPBP1Q92547 1522 aa16.88■□□□□ 0.29
CDH13-210ENST00000567445 IFT140Q96RY7 1462 aa16.87■□□□□ 0.29
CDH13-210ENST00000567445 ABCC8Q09428 1581 aa16.86■□□□□ 0.29
CDH13-210ENST00000567445 CACNB1Q02641 598 aaPredicted RBP16.86■□□□□ 0.29
CDH13-210ENST00000567445 TRIM41Q8WV44 630 aa16.86■□□□□ 0.29
CDH13-210ENST00000567445 ZNF608Q9ULD9 1512 aaPredicted RBP16.83■□□□□ 0.29
CDH13-210ENST00000567445 DNMBPQ6XZF7 1577 aa16.82■□□□□ 0.28
CDH13-210ENST00000567445 EIF4G3O43432 1585 aaKnown RBP16.74■□□□□ 0.27
CDH13-210ENST00000567445 TARBP1Q13395 1621 aaKnown RBP16.72■□□□□ 0.27
CDH13-210ENST00000567445 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.72■□□□□ 0.27
CDH13-210ENST00000567445 POLA1P09884 1462 aaPredicted RBP16.71■□□□□ 0.27
CDH13-210ENST00000567445 C1QBPQ07021 282 aaKnown RBP16.69■□□□□ 0.26
CDH13-210ENST00000567445 AQRO60306 1485 aaKnown RBP eCLIP16.69■□□□□ 0.26
CDH13-210ENST00000567445 RAD54L2Q9Y4B4 1467 aa16.64■□□□□ 0.25
CDH13-210ENST00000567445 RIMBP3CA6NJZ7 1639 aa16.64■□□□□ 0.25
CDH13-210ENST00000567445 RIMBP3BA6NNM3 1639 aa16.64■□□□□ 0.25
CDH13-210ENST00000567445 RIMBP3Q9UFD9 1639 aa16.64■□□□□ 0.25
CDH13-210ENST00000567445 SOGA1O94964 1423 aa16.64■□□□□ 0.25
CDH13-210ENST00000567445 FGD5Q6ZNL6 1462 aa16.6■□□□□ 0.25
CDH13-210ENST00000567445 ARHGEF11O15085 1522 aa16.6■□□□□ 0.25
CDH13-210ENST00000567445 CUX1P39880 1505 aa16.6■□□□□ 0.25
CDH13-210ENST00000567445 TDRD9Q8NDG6 1382 aaKnown RBP16.6■□□□□ 0.25
CDH13-210ENST00000567445 CHD1O14646 1710 aa16.6■□□□□ 0.25
CDH13-210ENST00000567445 SUPT5HO00267 1087 aaKnown RBP16.58■□□□□ 0.24
CDH13-210ENST00000567445 FBLN2P98095 1184 aa16.58■□□□□ 0.24
CDH13-210ENST00000567445 WDR97A6NE52 1622 aa16.56■□□□□ 0.24
CDH13-210ENST00000567445 SNAPC4Q5SXM2 1469 aa16.52■□□□□ 0.24
CDH13-210ENST00000567445 GRIN2BQ13224 1484 aa16.49■□□□□ 0.23
CDH13-210ENST00000567445 MAGI1Q96QZ7 1491 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms