RNA–Protein interactions for RNA: ENST00000541916.5

FNDC3A-206, Transcript of fibronectin type III domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3A, Length 6,328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-206ENST00000541916 DCAF8L2P0C7V8 631 aa16.33■□□□□ 0.2
FNDC3A-206ENST00000541916 NISCHQ9Y2I1 1504 aa15.56■□□□□ 0.08
FNDC3A-206ENST00000541916 SHROOM4Q9ULL8 1493 aa14.63□□□□□ -0.07
FNDC3A-206ENST00000541916 SUPT5HO00267 1087 aaKnown RBP14.57□□□□□ -0.08
FNDC3A-206ENST00000541916 FAM9AQ8IZU1 332 aaPredicted RBP14.42□□□□□ -0.1
FNDC3A-206ENST00000541916 ABCC9O60706 1549 aa14.22□□□□□ -0.13
FNDC3A-206ENST00000541916 EHMT2Q96KQ7 1210 aa14.16□□□□□ -0.14
FNDC3A-206ENST00000541916 PABPN1Q86U42 306 aaKnown RBP eCLIP13.99□□□□□ -0.17
FNDC3A-206ENST00000541916 APLP2Q06481 763 aa13.93□□□□□ -0.18
FNDC3A-206ENST00000541916 RANGAP1P46060 587 aaPredicted RBP13.85□□□□□ -0.19
FNDC3A-206ENST00000541916 ATP1B4Q9UN42 357 aaPredicted RBP13.85□□□□□ -0.19
FNDC3A-206ENST00000541916 TTBK1Q5TCY1 1321 aaPredicted RBP13.76□□□□□ -0.21
FNDC3A-206ENST00000541916 MYT1LQ9UL68 1186 aa13.69□□□□□ -0.22
FNDC3A-206ENST00000541916 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.61□□□□□ -0.23
FNDC3A-206ENST00000541916 HNRNPUL2Q1KMD3 747 aaKnown RBP13.61□□□□□ -0.23
FNDC3A-206ENST00000541916 TRIM41Q8WV44 630 aa13.58□□□□□ -0.24
FNDC3A-206ENST00000541916 UBTFP17480 764 aaKnown RBP13.53□□□□□ -0.24
FNDC3A-206ENST00000541916 FBLN2P98095 1184 aa13.52□□□□□ -0.25
FNDC3A-206ENST00000541916 CHIC1Q5VXU3 224 aa13.32□□□□□ -0.28
FNDC3A-206ENST00000541916 SCRIBQ14160 1630 aa13.19□□□□□ -0.3
FNDC3A-206ENST00000541916 RB1CC1Q8TDY2 1594 aa13.17□□□□□ -0.3
FNDC3A-206ENST00000541916 NPM1P06748 294 aaKnown RBP eCLIP13.15□□□□□ -0.3
FNDC3A-206ENST00000541916 CCDC180Q9P1Z9 1646 aa13.06□□□□□ -0.32
FNDC3A-206ENST00000541916 ERCC6Q03468 1493 aa13.02□□□□□ -0.33
FNDC3A-206ENST00000541916 PLPPR3Q6T4P5 718 aa13.01□□□□□ -0.33
FNDC3A-206ENST00000541916 ESF1Q9H501 851 aaKnown RBP13.01□□□□□ -0.33
FNDC3A-206ENST00000541916 ITGAEP38570 1179 aa12.98□□□□□ -0.33
FNDC3A-206ENST00000541916 BCANQ96GW7 911 aa12.94□□□□□ -0.34
FNDC3A-206ENST00000541916 CHMP7Q8WUX9 453 aaPredicted RBP12.93□□□□□ -0.34
FNDC3A-206ENST00000541916 ARID3CA6NKF2 412 aa12.92□□□□□ -0.34
FNDC3A-206ENST00000541916 TRHP20396 242 aaPredicted RBP12.92□□□□□ -0.34
FNDC3A-206ENST00000541916 NACADO15069 1562 aa12.88□□□□□ -0.35
FNDC3A-206ENST00000541916 PCGF6Q9BYE7 350 aa12.86□□□□□ -0.35
FNDC3A-206ENST00000541916 SLC4A1APQ9BWU0 796 aaKnown RBP12.84□□□□□ -0.35
FNDC3A-206ENST00000541916 PPARGC1BQ86YN6 1023 aaKnown RBP12.83□□□□□ -0.36
FNDC3A-206ENST00000541916 P3H3Q8IVL6 736 aa12.82□□□□□ -0.36
FNDC3A-206ENST00000541916 CDK11AQ9UQ88 783 aaPredicted RBP12.76□□□□□ -0.37
FNDC3A-206ENST00000541916 FAM50AQ14320 339 aaKnown RBP12.76□□□□□ -0.37
FNDC3A-206ENST00000541916 POLR3GLQ9BT43 218 aa12.76□□□□□ -0.37
FNDC3A-206ENST00000541916 ZNF777Q9ULD5 760 aaPredicted RBP12.75□□□□□ -0.37
FNDC3A-206ENST00000541916 ZCCHC6Q5VYS8 1495 aaKnown RBP12.75□□□□□ -0.37
FNDC3A-206ENST00000541916 CCER1Q8TC90 406 aaPredicted RBP12.73□□□□□ -0.37
FNDC3A-206ENST00000541916 STAG3Q9UJ98 1225 aa12.72□□□□□ -0.37
FNDC3A-206ENST00000541916 TRIM52Q96A61 297 aa12.71□□□□□ -0.37
FNDC3A-206ENST00000541916 BAZ1BQ9UIG0 1483 aaKnown RBP12.68□□□□□ -0.38
FNDC3A-206ENST00000541916 ARID4BQ4LE39 1312 aaPredicted RBP12.67□□□□□ -0.38
FNDC3A-206ENST00000541916 AEBP2Q6ZN18 517 aaPredicted RBP12.6□□□□□ -0.39
FNDC3A-206ENST00000541916 KCNH8Q96L42 1107 aa12.6□□□□□ -0.39
FNDC3A-206ENST00000541916 CECR2Q9BXF3 1484 aa12.59□□□□□ -0.39
FNDC3A-206ENST00000541916 CHGAP10645 457 aaKnown RBP12.57□□□□□ -0.4
FNDC3A-206ENST00000541916 PELP1Q8IZL8 1130 aaKnown RBP12.56□□□□□ -0.4
FNDC3A-206ENST00000541916 LOC105371045A0A1W2PR82 267 aa12.52□□□□□ -0.41
FNDC3A-206ENST00000541916 CNGB1Q14028 1251 aaPredicted RBP12.52□□□□□ -0.41
FNDC3A-206ENST00000541916 CSRNP3Q8WYN3 585 aa12.51□□□□□ -0.41
FNDC3A-206ENST00000541916 PDS5BQ9NTI5 1447 aa12.49□□□□□ -0.41
FNDC3A-206ENST00000541916 ZNF326Q5BKZ1 582 aaKnown RBP12.49□□□□□ -0.41
FNDC3A-206ENST00000541916 SCAF1Q9H7N4 1312 aaKnown RBP12.45□□□□□ -0.42
FNDC3A-206ENST00000541916 ZEB1P37275 1124 aaPredicted RBP12.44□□□□□ -0.42
FNDC3A-206ENST00000541916 C14orf37Q86TY3 774 aa12.44□□□□□ -0.42
FNDC3A-206ENST00000541916 SLC24A1O60721 1099 aa12.43□□□□□ -0.42
FNDC3A-206ENST00000541916 PLEKHD1A6NEE1 506 aa12.42□□□□□ -0.42
FNDC3A-206ENST00000541916 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.42□□□□□ -0.423e-6■■□□□ 11.5
FNDC3A-206ENST00000541916 TSPY4P0CV99 314 aa12.38□□□□□ -0.43
FNDC3A-206ENST00000541916 TSPY10P0CW01 314 aa12.38□□□□□ -0.43
FNDC3A-206ENST00000541916 PPP1R15AO75807 674 aaPredicted RBP12.38□□□□□ -0.43
FNDC3A-206ENST00000541916 OSCARQ8IYS5 282 aa12.35□□□□□ -0.43
FNDC3A-206ENST00000541916 BAZ1AQ9NRL2 1556 aaPredicted RBP12.34□□□□□ -0.43
FNDC3A-206ENST00000541916 NEUROD1Q13562 356 aa12.33□□□□□ -0.44
FNDC3A-206ENST00000541916 CYB5RLQ6IPT4 315 aa12.32□□□□□ -0.44
FNDC3A-206ENST00000541916 MLECQ14165 292 aa12.32□□□□□ -0.44
FNDC3A-206ENST00000541916 SMARCA2P51531 1590 aa12.32□□□□□ -0.44
FNDC3A-206ENST00000541916 A0A0G2JS52 829 aa12.31□□□□□ -0.44
FNDC3A-206ENST00000541916 HAP1P54257 671 aaPredicted RBP12.31□□□□□ -0.44
FNDC3A-206ENST00000541916 SENP3Q9H4L4 574 aaPredicted RBP12.29□□□□□ -0.44
FNDC3A-206ENST00000541916 TRIM26Q12899 539 aaPredicted RBP12.28□□□□□ -0.44
FNDC3A-206ENST00000541916 PLEKHG5O94827 1062 aa12.28□□□□□ -0.44
FNDC3A-206ENST00000541916 CENPBP07199 599 aaPredicted RBP12.27□□□□□ -0.44
FNDC3A-206ENST00000541916 YTHDC1Q96MU7 727 aaKnown RBP12.26□□□□□ -0.45
FNDC3A-206ENST00000541916 MTUS2Q5JR59 1369 aa12.25□□□□□ -0.45
FNDC3A-206ENST00000541916 NEFMP07197 916 aa12.25□□□□□ -0.45
FNDC3A-206ENST00000541916 EIF4G1Q04637 1599 aaKnown RBP12.24□□□□□ -0.45
FNDC3A-206ENST00000541916 CHIC2Q9UKJ5 165 aa12.24□□□□□ -0.45
FNDC3A-206ENST00000541916 KIF27Q86VH2 1401 aa12.23□□□□□ -0.45
FNDC3A-206ENST00000541916 WRNQ14191 1432 aaPredicted RBP eCLIP12.23□□□□□ -0.45
FNDC3A-206ENST00000541916 RSF1Q96T23 1441 aaPredicted RBP12.23□□□□□ -0.45
FNDC3A-206ENST00000541916 DCAF1Q9Y4B6 1507 aa12.22□□□□□ -0.45
FNDC3A-206ENST00000541916 ZBTB7CA1YPR0 619 aa12.21□□□□□ -0.45
FNDC3A-206ENST00000541916 CEP164Q9UPV0 1460 aa12.19□□□□□ -0.46
FNDC3A-206ENST00000541916 SOGA1O94964 1423 aa12.18□□□□□ -0.46
FNDC3A-206ENST00000541916 CARMIL2Q6F5E8 1435 aa12.17□□□□□ -0.46
FNDC3A-206ENST00000541916 CADPSQ9ULU8 1353 aa12.17□□□□□ -0.46
FNDC3A-206ENST00000541916 TDRD9Q8NDG6 1382 aaKnown RBP12.16□□□□□ -0.46
FNDC3A-206ENST00000541916 MYT1Q01538 1121 aa12.16□□□□□ -0.46
FNDC3A-206ENST00000541916 CFDP1Q9UEE9 299 aaPredicted RBP12.15□□□□□ -0.46
FNDC3A-206ENST00000541916 CUX2O14529 1486 aa12.15□□□□□ -0.47
FNDC3A-206ENST00000541916 NEFLP07196 543 aa12.13□□□□□ -0.47
FNDC3A-206ENST00000541916 ERICH6Q7L0X2 663 aa12.12□□□□□ -0.47
FNDC3A-206ENST00000541916 LMOD2Q6P5Q4 547 aa12.09□□□□□ -0.47
FNDC3A-206ENST00000541916 HDGFP51858 240 aaKnown RBP12.08□□□□□ -0.48
FNDC3A-206ENST00000541916 CARMIL1Q5VZK9 1371 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms