Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
ZC3H4Q9UPT8 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC25.1■■□□□ 1.61
ZC3H4Q9UPT8 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
ZC3H4Q9UPT8 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC25.1■■□□□ 1.61
ZC3H4Q9UPT8 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC25.1■■□□□ 1.61
ZC3H4Q9UPT8 GLDC-219ENST00000640208 420 ntTSL 2 BASIC25.1■■□□□ 1.61
ZC3H4Q9UPT8 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
ZC3H4Q9UPT8 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
ZC3H4Q9UPT8 LINC01124-201ENST00000409786 2117 ntBASIC25.09■■□□□ 1.61
ZC3H4Q9UPT8 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
ZC3H4Q9UPT8 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC25.09■■□□□ 1.61
ZC3H4Q9UPT8 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
ZC3H4Q9UPT8 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC25.09■■□□□ 1.61
ZC3H4Q9UPT8 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
ZC3H4Q9UPT8 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC25.09■■□□□ 1.61
ZC3H4Q9UPT8 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC25.09■■□□□ 1.61
ZC3H4Q9UPT8 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
ZC3H4Q9UPT8 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
ZC3H4Q9UPT8 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
ZC3H4Q9UPT8 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC25.08■■□□□ 1.61
ZC3H4Q9UPT8 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC25.08■■□□□ 1.61
ZC3H4Q9UPT8 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
ZC3H4Q9UPT8 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
ZC3H4Q9UPT8 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC25.08■■□□□ 1.61
ZC3H4Q9UPT8 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
ZC3H4Q9UPT8 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC25.08■■□□□ 1.6
ZC3H4Q9UPT8 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
ZC3H4Q9UPT8 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
ZC3H4Q9UPT8 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC25.08■■□□□ 1.6
ZC3H4Q9UPT8 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC25.08■■□□□ 1.6
ZC3H4Q9UPT8 AF186192.3-201ENST00000583427 947 ntBASIC25.08■■□□□ 1.6
ZC3H4Q9UPT8 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.6
ZC3H4Q9UPT8 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC25.07■■□□□ 1.6
ZC3H4Q9UPT8 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
ZC3H4Q9UPT8 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
ZC3H4Q9UPT8 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
ZC3H4Q9UPT8 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
ZC3H4Q9UPT8 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
ZC3H4Q9UPT8 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC25.07■■□□□ 1.6
ZC3H4Q9UPT8 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC25.07■■□□□ 1.6
ZC3H4Q9UPT8 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC25.07■■□□□ 1.6
ZC3H4Q9UPT8 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC25.07■■□□□ 1.6
ZC3H4Q9UPT8 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
ZC3H4Q9UPT8 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
ZC3H4Q9UPT8 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC25.06■■□□□ 1.6
ZC3H4Q9UPT8 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
ZC3H4Q9UPT8 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
ZC3H4Q9UPT8 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
ZC3H4Q9UPT8 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
ZC3H4Q9UPT8 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC25.06■■□□□ 1.6
ZC3H4Q9UPT8 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC25.06■■□□□ 1.6
ZC3H4Q9UPT8 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
ZC3H4Q9UPT8 RPS15-203ENST00000586096 570 ntTSL 2 BASIC25.06■■□□□ 1.6
ZC3H4Q9UPT8 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
ZC3H4Q9UPT8 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
ZC3H4Q9UPT8 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
ZC3H4Q9UPT8 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
ZC3H4Q9UPT8 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
ZC3H4Q9UPT8 ABCB10P4-201ENST00000566803 2184 ntBASIC25.05■■□□□ 1.6
ZC3H4Q9UPT8 ANOS2P-203ENST00000472227 1816 ntBASIC25.05■■□□□ 1.6
ZC3H4Q9UPT8 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
ZC3H4Q9UPT8 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
ZC3H4Q9UPT8 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC25.05■■□□□ 1.6
ZC3H4Q9UPT8 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
ZC3H4Q9UPT8 DECR2-212ENST00000627716 352 ntTSL 2 BASIC25.05■■□□□ 1.6
ZC3H4Q9UPT8 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
ZC3H4Q9UPT8 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC25.05■■□□□ 1.6
ZC3H4Q9UPT8 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
ZC3H4Q9UPT8 TERF1P1-201ENST00000311003 1181 ntBASIC25.04■■□□□ 1.6
ZC3H4Q9UPT8 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
ZC3H4Q9UPT8 SRI-203ENST00000419179 1307 ntTSL 2 BASIC25.04■■□□□ 1.6
ZC3H4Q9UPT8 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
ZC3H4Q9UPT8 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
ZC3H4Q9UPT8 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
ZC3H4Q9UPT8 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
ZC3H4Q9UPT8 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
ZC3H4Q9UPT8 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
ZC3H4Q9UPT8 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
ZC3H4Q9UPT8 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
ZC3H4Q9UPT8 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC25.03■■□□□ 1.6
ZC3H4Q9UPT8 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
ZC3H4Q9UPT8 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
ZC3H4Q9UPT8 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
ZC3H4Q9UPT8 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC25.03■■□□□ 1.6
ZC3H4Q9UPT8 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC25.03■■□□□ 1.6
ZC3H4Q9UPT8 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
ZC3H4Q9UPT8 SERP1-205ENST00000487153 657 ntTSL 4 BASIC25.03■■□□□ 1.6
ZC3H4Q9UPT8 RBM42-202ENST00000586618 771 ntTSL 3 BASIC25.03■■□□□ 1.6
ZC3H4Q9UPT8 AC137767.1-201ENST00000602918 1920 ntBASIC25.03■■□□□ 1.6
ZC3H4Q9UPT8 AC073508.3-201ENST00000619697 1419 ntBASIC25.03■■□□□ 1.6
ZC3H4Q9UPT8 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
ZC3H4Q9UPT8 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC25.02■■□□□ 1.6
ZC3H4Q9UPT8 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
ZC3H4Q9UPT8 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
ZC3H4Q9UPT8 AC003102.1-202ENST00000563394 1796 ntBASIC25.02■■□□□ 1.6
ZC3H4Q9UPT8 RER1-204ENST00000378518 522 ntTSL 3 BASIC25.02■■□□□ 1.6
ZC3H4Q9UPT8 KRT18P57-201ENST00000443599 1254 ntBASIC25.02■■□□□ 1.6
ZC3H4Q9UPT8 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
ZC3H4Q9UPT8 RBM17P1-201ENST00000453646 1190 ntBASIC25.02■■□□□ 1.6
ZC3H4Q9UPT8 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC25.02■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms