Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 AL049796.1-201ENST00000565336 1766 ntBASIC12.05□□□□□ -0.48
CYSTM1Q9H1C7 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CYSTM1Q9H1C7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
CYSTM1Q9H1C7 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC12.04□□□□□ -0.48
CYSTM1Q9H1C7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
CYSTM1Q9H1C7 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CYSTM1Q9H1C7 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC12.04□□□□□ -0.48
CYSTM1Q9H1C7 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
CYSTM1Q9H1C7 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CYSTM1Q9H1C7 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CYSTM1Q9H1C7 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC12.04□□□□□ -0.48
CYSTM1Q9H1C7 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CYSTM1Q9H1C7 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC12.04□□□□□ -0.48
CYSTM1Q9H1C7 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
CYSTM1Q9H1C7 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CYSTM1Q9H1C7 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CYSTM1Q9H1C7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CYSTM1Q9H1C7 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CYSTM1Q9H1C7 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC12.04□□□□□ -0.48
CYSTM1Q9H1C7 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CYSTM1Q9H1C7 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CYSTM1Q9H1C7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC12.04□□□□□ -0.48
CYSTM1Q9H1C7 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CYSTM1Q9H1C7 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CYSTM1Q9H1C7 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
CYSTM1Q9H1C7 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
CYSTM1Q9H1C7 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CYSTM1Q9H1C7 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
CYSTM1Q9H1C7 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CYSTM1Q9H1C7 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC12.03□□□□□ -0.48
CYSTM1Q9H1C7 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
CYSTM1Q9H1C7 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CYSTM1Q9H1C7 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
CYSTM1Q9H1C7 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC12.03□□□□□ -0.48
CYSTM1Q9H1C7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CYSTM1Q9H1C7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CYSTM1Q9H1C7 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CYSTM1Q9H1C7 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
CYSTM1Q9H1C7 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CYSTM1Q9H1C7 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
CYSTM1Q9H1C7 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CYSTM1Q9H1C7 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CYSTM1Q9H1C7 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CYSTM1Q9H1C7 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
CYSTM1Q9H1C7 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
CYSTM1Q9H1C7 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CYSTM1Q9H1C7 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CYSTM1Q9H1C7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
CYSTM1Q9H1C7 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CYSTM1Q9H1C7 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CYSTM1Q9H1C7 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CYSTM1Q9H1C7 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
CYSTM1Q9H1C7 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CYSTM1Q9H1C7 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CYSTM1Q9H1C7 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CYSTM1Q9H1C7 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CYSTM1Q9H1C7 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CYSTM1Q9H1C7 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CYSTM1Q9H1C7 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CYSTM1Q9H1C7 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
CYSTM1Q9H1C7 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CYSTM1Q9H1C7 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CYSTM1Q9H1C7 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CYSTM1Q9H1C7 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CYSTM1Q9H1C7 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
CYSTM1Q9H1C7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
CYSTM1Q9H1C7 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
CYSTM1Q9H1C7 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CYSTM1Q9H1C7 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CYSTM1Q9H1C7 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC12.02□□□□□ -0.49
CYSTM1Q9H1C7 AC103702.1-201ENST00000548801 2630 ntBASIC12.02□□□□□ -0.49
CYSTM1Q9H1C7 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CYSTM1Q9H1C7 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CYSTM1Q9H1C7 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CYSTM1Q9H1C7 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC12.02□□□□□ -0.49
CYSTM1Q9H1C7 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC12.02□□□□□ -0.49
CYSTM1Q9H1C7 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CYSTM1Q9H1C7 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC12.02□□□□□ -0.49
CYSTM1Q9H1C7 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC12.02□□□□□ -0.49
CYSTM1Q9H1C7 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CYSTM1Q9H1C7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC12.02□□□□□ -0.49
CYSTM1Q9H1C7 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CYSTM1Q9H1C7 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CYSTM1Q9H1C7 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CYSTM1Q9H1C7 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CYSTM1Q9H1C7 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CYSTM1Q9H1C7 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CYSTM1Q9H1C7 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CYSTM1Q9H1C7 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
CYSTM1Q9H1C7 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CYSTM1Q9H1C7 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CYSTM1Q9H1C7 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CYSTM1Q9H1C7 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CYSTM1Q9H1C7 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
CYSTM1Q9H1C7 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CYSTM1Q9H1C7 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC12.01□□□□□ -0.49
CYSTM1Q9H1C7 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CYSTM1Q9H1C7 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC12.01□□□□□ -0.49
CYSTM1Q9H1C7 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CYSTM1Q9H1C7 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms