Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 MKRN4P-201ENST00000444706 1521 ntBASIC21.46■■□□□ 1.03
TRIM62Q9BVG3 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.46■■□□□ 1.03
TRIM62Q9BVG3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM62Q9BVG3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
TRIM62Q9BVG3 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.46■■□□□ 1.03
TRIM62Q9BVG3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.46■■□□□ 1.03
TRIM62Q9BVG3 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.46■■□□□ 1.03
TRIM62Q9BVG3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM62Q9BVG3 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.46■■□□□ 1.03
TRIM62Q9BVG3 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.46■■□□□ 1.03
TRIM62Q9BVG3 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.46■■□□□ 1.03
TRIM62Q9BVG3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM62Q9BVG3 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.46■■□□□ 1.03
TRIM62Q9BVG3 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.46■■□□□ 1.03
TRIM62Q9BVG3 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
TRIM62Q9BVG3 CYP21A1P-202ENST00000354927 1481 ntBASIC21.45■■□□□ 1.03
TRIM62Q9BVG3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM62Q9BVG3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM62Q9BVG3 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM62Q9BVG3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM62Q9BVG3 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM62Q9BVG3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM62Q9BVG3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM62Q9BVG3 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.45■■□□□ 1.02
TRIM62Q9BVG3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
TRIM62Q9BVG3 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM62Q9BVG3 AC027702.1-201ENST00000563810 1770 ntBASIC21.45■■□□□ 1.02
TRIM62Q9BVG3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM62Q9BVG3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM62Q9BVG3 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM62Q9BVG3 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM62Q9BVG3 AC087633.2-202ENST00000565166 1439 ntBASIC21.45■■□□□ 1.02
TRIM62Q9BVG3 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
TRIM62Q9BVG3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
TRIM62Q9BVG3 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM62Q9BVG3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM62Q9BVG3 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.45■■□□□ 1.02
TRIM62Q9BVG3 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM62Q9BVG3 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
TRIM62Q9BVG3 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.44■■□□□ 1.02
TRIM62Q9BVG3 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM62Q9BVG3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM62Q9BVG3 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM62Q9BVG3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM62Q9BVG3 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.44■■□□□ 1.02
TRIM62Q9BVG3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM62Q9BVG3 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.44■■□□□ 1.02
TRIM62Q9BVG3 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.44■■□□□ 1.02
TRIM62Q9BVG3 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.44■■□□□ 1.02
TRIM62Q9BVG3 TSPY6P-201ENST00000448518 926 ntBASIC21.44■■□□□ 1.02
TRIM62Q9BVG3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.44■■□□□ 1.02
TRIM62Q9BVG3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.44■■□□□ 1.02
TRIM62Q9BVG3 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
TRIM62Q9BVG3 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.44■■□□□ 1.02
TRIM62Q9BVG3 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.44■■□□□ 1.02
TRIM62Q9BVG3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.44■■□□□ 1.02
TRIM62Q9BVG3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM62Q9BVG3 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM62Q9BVG3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
TRIM62Q9BVG3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM62Q9BVG3 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
TRIM62Q9BVG3 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM62Q9BVG3 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM62Q9BVG3 AC093787.1-201ENST00000450396 207 ntBASIC21.43■■□□□ 1.02
TRIM62Q9BVG3 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.43■■□□□ 1.02
TRIM62Q9BVG3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.43■■□□□ 1.02
TRIM62Q9BVG3 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM62Q9BVG3 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.43■■□□□ 1.02
TRIM62Q9BVG3 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.43■■□□□ 1.02
TRIM62Q9BVG3 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM62Q9BVG3 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM62Q9BVG3 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.43■■□□□ 1.02
TRIM62Q9BVG3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.43■■□□□ 1.02
TRIM62Q9BVG3 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
TRIM62Q9BVG3 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.43■■□□□ 1.02
TRIM62Q9BVG3 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.43■■□□□ 1.02
TRIM62Q9BVG3 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM62Q9BVG3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM62Q9BVG3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
TRIM62Q9BVG3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM62Q9BVG3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM62Q9BVG3 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM62Q9BVG3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM62Q9BVG3 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.42■■□□□ 1.02
TRIM62Q9BVG3 ID1-201ENST00000376105 1233 ntBASIC21.42■■□□□ 1.02
TRIM62Q9BVG3 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
TRIM62Q9BVG3 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.42■■□□□ 1.02
TRIM62Q9BVG3 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM62Q9BVG3 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.42■■□□□ 1.02
TRIM62Q9BVG3 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.42■■□□□ 1.02
TRIM62Q9BVG3 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
TRIM62Q9BVG3 CYP2T3P-201ENST00000601990 817 ntBASIC21.42■■□□□ 1.02
TRIM62Q9BVG3 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.42■■□□□ 1.02
TRIM62Q9BVG3 AL589743.5-201ENST00000616611 1050 ntBASIC21.42■■□□□ 1.02
TRIM62Q9BVG3 AL109923.1-201ENST00000618799 583 ntBASIC21.42■■□□□ 1.02
TRIM62Q9BVG3 AC006128.1-201ENST00000624704 1661 ntBASIC21.42■■□□□ 1.02
TRIM62Q9BVG3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
TRIM62Q9BVG3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM62Q9BVG3 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM62Q9BVG3 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms