Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.64■□□□□ 0.41
CSMD1Q96PZ7 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.64■□□□□ 0.41
CSMD1Q96PZ7 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSMD1Q96PZ7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.64■□□□□ 0.41
CSMD1Q96PZ7 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSMD1Q96PZ7 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSMD1Q96PZ7 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.64■□□□□ 0.41
CSMD1Q96PZ7 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CSMD1Q96PZ7 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSMD1Q96PZ7 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSMD1Q96PZ7 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSMD1Q96PZ7 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
CSMD1Q96PZ7 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CSMD1Q96PZ7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CSMD1Q96PZ7 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.63■□□□□ 0.41
CSMD1Q96PZ7 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CSMD1Q96PZ7 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.63■□□□□ 0.41
CSMD1Q96PZ7 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.63■□□□□ 0.41
CSMD1Q96PZ7 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CSMD1Q96PZ7 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CSMD1Q96PZ7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CSMD1Q96PZ7 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSMD1Q96PZ7 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CSMD1Q96PZ7 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSMD1Q96PZ7 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CSMD1Q96PZ7 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSMD1Q96PZ7 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CSMD1Q96PZ7 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSMD1Q96PZ7 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.63■□□□□ 0.41
CSMD1Q96PZ7 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSMD1Q96PZ7 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSMD1Q96PZ7 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSMD1Q96PZ7 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CSMD1Q96PZ7 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSMD1Q96PZ7 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.63■□□□□ 0.41
CSMD1Q96PZ7 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSMD1Q96PZ7 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CSMD1Q96PZ7 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CSMD1Q96PZ7 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.63■□□□□ 0.41
CSMD1Q96PZ7 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.63■□□□□ 0.41
CSMD1Q96PZ7 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CSMD1Q96PZ7 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CSMD1Q96PZ7 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CSMD1Q96PZ7 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CSMD1Q96PZ7 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.62■□□□□ 0.41
CSMD1Q96PZ7 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.62■□□□□ 0.41
CSMD1Q96PZ7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSMD1Q96PZ7 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSMD1Q96PZ7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CSMD1Q96PZ7 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSMD1Q96PZ7 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CSMD1Q96PZ7 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSMD1Q96PZ7 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.61■□□□□ 0.41
CSMD1Q96PZ7 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.61■□□□□ 0.41
CSMD1Q96PZ7 AC243732.1-201ENST00000612648 864 ntBASIC17.61■□□□□ 0.41
CSMD1Q96PZ7 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC17.61■□□□□ 0.41
CSMD1Q96PZ7 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSMD1Q96PZ7 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.61■□□□□ 0.41
CSMD1Q96PZ7 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSMD1Q96PZ7 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.61■□□□□ 0.41
CSMD1Q96PZ7 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.61■□□□□ 0.41
CSMD1Q96PZ7 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSMD1Q96PZ7 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CSMD1Q96PZ7 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.61■□□□□ 0.41
CSMD1Q96PZ7 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSMD1Q96PZ7 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CSMD1Q96PZ7 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CSMD1Q96PZ7 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.61■□□□□ 0.41
CSMD1Q96PZ7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.61■□□□□ 0.41
CSMD1Q96PZ7 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSMD1Q96PZ7 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
CSMD1Q96PZ7 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.6■□□□□ 0.41
CSMD1Q96PZ7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSMD1Q96PZ7 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CSMD1Q96PZ7 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CSMD1Q96PZ7 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.6■□□□□ 0.41
CSMD1Q96PZ7 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
CSMD1Q96PZ7 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.6■□□□□ 0.41
CSMD1Q96PZ7 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSMD1Q96PZ7 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CSMD1Q96PZ7 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CSMD1Q96PZ7 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.6■□□□□ 0.41
CSMD1Q96PZ7 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.6■□□□□ 0.41
CSMD1Q96PZ7 KRT18P22-201ENST00000402024 1347 ntBASIC17.6■□□□□ 0.41
CSMD1Q96PZ7 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CSMD1Q96PZ7 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.6■□□□□ 0.41
CSMD1Q96PZ7 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CSMD1Q96PZ7 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CSMD1Q96PZ7 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.6■□□□□ 0.41
CSMD1Q96PZ7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSMD1Q96PZ7 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.59■□□□□ 0.41
CSMD1Q96PZ7 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CSMD1Q96PZ7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSMD1Q96PZ7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSMD1Q96PZ7 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CSMD1Q96PZ7 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CSMD1Q96PZ7 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CSMD1Q96PZ7 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSMD1Q96PZ7 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSMD1Q96PZ7 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms