Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CMTM3Q96MX0 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CMTM3Q96MX0 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CMTM3Q96MX0 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CMTM3Q96MX0 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CMTM3Q96MX0 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC17.67■□□□□ 0.42
CMTM3Q96MX0 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC17.67■□□□□ 0.42
CMTM3Q96MX0 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CMTM3Q96MX0 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CMTM3Q96MX0 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
CMTM3Q96MX0 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CMTM3Q96MX0 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CMTM3Q96MX0 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.67■□□□□ 0.42
CMTM3Q96MX0 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CMTM3Q96MX0 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.67■□□□□ 0.42
CMTM3Q96MX0 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CMTM3Q96MX0 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.66■□□□□ 0.42
CMTM3Q96MX0 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CMTM3Q96MX0 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CMTM3Q96MX0 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
CMTM3Q96MX0 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.66■□□□□ 0.42
CMTM3Q96MX0 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CMTM3Q96MX0 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CMTM3Q96MX0 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CMTM3Q96MX0 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CMTM3Q96MX0 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CMTM3Q96MX0 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CMTM3Q96MX0 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.66■□□□□ 0.42
CMTM3Q96MX0 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CMTM3Q96MX0 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CMTM3Q96MX0 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CMTM3Q96MX0 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
CMTM3Q96MX0 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CMTM3Q96MX0 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.66■□□□□ 0.42
CMTM3Q96MX0 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
CMTM3Q96MX0 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.66■□□□□ 0.42
CMTM3Q96MX0 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CMTM3Q96MX0 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CMTM3Q96MX0 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.65■□□□□ 0.42
CMTM3Q96MX0 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CMTM3Q96MX0 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CMTM3Q96MX0 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CMTM3Q96MX0 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CMTM3Q96MX0 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.65■□□□□ 0.42
CMTM3Q96MX0 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CMTM3Q96MX0 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CMTM3Q96MX0 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
CMTM3Q96MX0 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC17.65■□□□□ 0.42
CMTM3Q96MX0 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.65■□□□□ 0.42
CMTM3Q96MX0 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CMTM3Q96MX0 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CMTM3Q96MX0 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.65■□□□□ 0.42
CMTM3Q96MX0 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CMTM3Q96MX0 AC005332.7-201ENST00000614046 2005 ntBASIC17.65■□□□□ 0.42
CMTM3Q96MX0 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CMTM3Q96MX0 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.65■□□□□ 0.42
CMTM3Q96MX0 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CMTM3Q96MX0 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CMTM3Q96MX0 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CMTM3Q96MX0 TMEM179-206ENST00000616017 1645 ntBASIC17.65■□□□□ 0.42
CMTM3Q96MX0 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CMTM3Q96MX0 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
CMTM3Q96MX0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CMTM3Q96MX0 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CMTM3Q96MX0 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
CMTM3Q96MX0 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CMTM3Q96MX0 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CMTM3Q96MX0 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CMTM3Q96MX0 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CMTM3Q96MX0 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CMTM3Q96MX0 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CMTM3Q96MX0 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.64■□□□□ 0.41
CMTM3Q96MX0 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CMTM3Q96MX0 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CMTM3Q96MX0 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.64■□□□□ 0.41
CMTM3Q96MX0 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CMTM3Q96MX0 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CMTM3Q96MX0 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CMTM3Q96MX0 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CMTM3Q96MX0 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CMTM3Q96MX0 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CMTM3Q96MX0 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CMTM3Q96MX0 AC009237.3-201ENST00000393279 1427 ntBASIC17.64■□□□□ 0.41
CMTM3Q96MX0 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CMTM3Q96MX0 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.63■□□□□ 0.41
CMTM3Q96MX0 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
CMTM3Q96MX0 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.63■□□□□ 0.41
CMTM3Q96MX0 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.63■□□□□ 0.41
CMTM3Q96MX0 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
CMTM3Q96MX0 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.63■□□□□ 0.41
CMTM3Q96MX0 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CMTM3Q96MX0 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CMTM3Q96MX0 AL158211.5-201ENST00000623583 2518 ntBASIC17.63■□□□□ 0.41
CMTM3Q96MX0 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CMTM3Q96MX0 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CMTM3Q96MX0 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CMTM3Q96MX0 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CMTM3Q96MX0 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.63■□□□□ 0.41
CMTM3Q96MX0 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CMTM3Q96MX0 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms