Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC32.35■■■□□ 2.77
VPS8Q8N3P4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
VPS8Q8N3P4 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
VPS8Q8N3P4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC32.35■■■□□ 2.77
VPS8Q8N3P4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC32.35■■■□□ 2.77
VPS8Q8N3P4 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
VPS8Q8N3P4 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
VPS8Q8N3P4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
VPS8Q8N3P4 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC32.35■■■□□ 2.77
VPS8Q8N3P4 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC32.35■■■□□ 2.77
VPS8Q8N3P4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC32.35■■■□□ 2.77
VPS8Q8N3P4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
VPS8Q8N3P4 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
VPS8Q8N3P4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC32.35■■■□□ 2.77
VPS8Q8N3P4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
VPS8Q8N3P4 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC32.35■■■□□ 2.77
VPS8Q8N3P4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
VPS8Q8N3P4 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
VPS8Q8N3P4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
VPS8Q8N3P4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
VPS8Q8N3P4 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC32.34■■■□□ 2.77
VPS8Q8N3P4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC32.34■■■□□ 2.77
VPS8Q8N3P4 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
VPS8Q8N3P4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC32.34■■■□□ 2.77
VPS8Q8N3P4 CD99P1-205ENST00000527459 561 ntBASIC32.34■■■□□ 2.77
VPS8Q8N3P4 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC32.33■■■□□ 2.77
VPS8Q8N3P4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
VPS8Q8N3P4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
VPS8Q8N3P4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC32.33■■■□□ 2.77
VPS8Q8N3P4 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC32.33■■■□□ 2.77
VPS8Q8N3P4 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
VPS8Q8N3P4 ABHD17AP1-201ENST00000358206 933 ntBASIC32.33■■■□□ 2.77
VPS8Q8N3P4 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC32.33■■■□□ 2.77
VPS8Q8N3P4 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC32.33■■■□□ 2.77
VPS8Q8N3P4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC32.33■■■□□ 2.77
VPS8Q8N3P4 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC32.33■■■□□ 2.77
VPS8Q8N3P4 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC32.32■■■□□ 2.77
VPS8Q8N3P4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
VPS8Q8N3P4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
VPS8Q8N3P4 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC32.32■■■□□ 2.76
VPS8Q8N3P4 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
VPS8Q8N3P4 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
VPS8Q8N3P4 MIR2861-201ENST00000636310 90 ntBASIC32.32■■■□□ 2.76
VPS8Q8N3P4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC32.32■■■□□ 2.76
VPS8Q8N3P4 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC32.32■■■□□ 2.76
VPS8Q8N3P4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
VPS8Q8N3P4 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
VPS8Q8N3P4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC32.31■■■□□ 2.76
VPS8Q8N3P4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
VPS8Q8N3P4 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
VPS8Q8N3P4 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
VPS8Q8N3P4 NME6-213ENST00000451657 871 ntTSL 2 BASIC32.31■■■□□ 2.76
VPS8Q8N3P4 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC32.31■■■□□ 2.76
VPS8Q8N3P4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC32.31■■■□□ 2.76
VPS8Q8N3P4 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC32.31■■■□□ 2.76
VPS8Q8N3P4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
VPS8Q8N3P4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC32.31■■■□□ 2.76
VPS8Q8N3P4 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC32.31■■■□□ 2.76
VPS8Q8N3P4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
VPS8Q8N3P4 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
VPS8Q8N3P4 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
VPS8Q8N3P4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC32.3■■■□□ 2.76
VPS8Q8N3P4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
VPS8Q8N3P4 PLK5-205ENST00000642079 1969 ntBASIC32.3■■■□□ 2.76
VPS8Q8N3P4 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC32.3■■■□□ 2.76
VPS8Q8N3P4 AC097658.1-201ENST00000475555 843 ntBASIC32.3■■■□□ 2.76
VPS8Q8N3P4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC32.3■■■□□ 2.76
VPS8Q8N3P4 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
VPS8Q8N3P4 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
VPS8Q8N3P4 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC32.3■■■□□ 2.76
VPS8Q8N3P4 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
VPS8Q8N3P4 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
VPS8Q8N3P4 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
VPS8Q8N3P4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC32.29■■■□□ 2.76
VPS8Q8N3P4 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
VPS8Q8N3P4 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC32.29■■■□□ 2.76
VPS8Q8N3P4 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
VPS8Q8N3P4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
VPS8Q8N3P4 PGM5P4-201ENST00000421970 445 ntBASIC32.29■■■□□ 2.76
VPS8Q8N3P4 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC32.29■■■□□ 2.76
VPS8Q8N3P4 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
VPS8Q8N3P4 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC32.29■■■□□ 2.76
VPS8Q8N3P4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
VPS8Q8N3P4 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC32.29■■■□□ 2.76
VPS8Q8N3P4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC32.29■■■□□ 2.76
VPS8Q8N3P4 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC32.29■■■□□ 2.76
VPS8Q8N3P4 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
VPS8Q8N3P4 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC32.28■■■□□ 2.76
VPS8Q8N3P4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC32.28■■■□□ 2.76
VPS8Q8N3P4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
VPS8Q8N3P4 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC32.28■■■□□ 2.76
VPS8Q8N3P4 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC32.28■■■□□ 2.76
VPS8Q8N3P4 AC121338.2-201ENST00000622535 1744 ntBASIC32.28■■■□□ 2.76
VPS8Q8N3P4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC32.28■■■□□ 2.76
VPS8Q8N3P4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
VPS8Q8N3P4 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC32.27■■■□□ 2.76
VPS8Q8N3P4 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
VPS8Q8N3P4 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
VPS8Q8N3P4 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC32.27■■■□□ 2.76
VPS8Q8N3P4 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC32.26■■■□□ 2.76
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms