Protein–RNA interactions for Protein: Q2TAM9

TUSC1, Tumor suppressor candidate gene 1 protein, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC1Q2TAM9 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUSC1Q2TAM9 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TUSC1Q2TAM9 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
TUSC1Q2TAM9 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUSC1Q2TAM9 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TUSC1Q2TAM9 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.62■□□□□ 0.41
TUSC1Q2TAM9 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.62■□□□□ 0.41
TUSC1Q2TAM9 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUSC1Q2TAM9 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TUSC1Q2TAM9 AC244015.2-201ENST00000616358 1861 ntBASIC17.62■□□□□ 0.41
TUSC1Q2TAM9 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TUSC1Q2TAM9 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
TUSC1Q2TAM9 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUSC1Q2TAM9 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TUSC1Q2TAM9 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
TUSC1Q2TAM9 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TUSC1Q2TAM9 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TUSC1Q2TAM9 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TUSC1Q2TAM9 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
TUSC1Q2TAM9 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TUSC1Q2TAM9 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
TUSC1Q2TAM9 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.61■□□□□ 0.41
TUSC1Q2TAM9 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.61■□□□□ 0.41
TUSC1Q2TAM9 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.61■□□□□ 0.41
TUSC1Q2TAM9 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.61■□□□□ 0.41
TUSC1Q2TAM9 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.61■□□□□ 0.41
TUSC1Q2TAM9 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.61■□□□□ 0.41
TUSC1Q2TAM9 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TUSC1Q2TAM9 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.61■□□□□ 0.41
TUSC1Q2TAM9 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TUSC1Q2TAM9 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.61■□□□□ 0.41
TUSC1Q2TAM9 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TUSC1Q2TAM9 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TUSC1Q2TAM9 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TUSC1Q2TAM9 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC17.61■□□□□ 0.41
TUSC1Q2TAM9 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TUSC1Q2TAM9 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
TUSC1Q2TAM9 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TUSC1Q2TAM9 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.6■□□□□ 0.41
TUSC1Q2TAM9 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
TUSC1Q2TAM9 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TUSC1Q2TAM9 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TUSC1Q2TAM9 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TUSC1Q2TAM9 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TUSC1Q2TAM9 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.6■□□□□ 0.41
TUSC1Q2TAM9 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TUSC1Q2TAM9 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TUSC1Q2TAM9 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.6■□□□□ 0.41
TUSC1Q2TAM9 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TUSC1Q2TAM9 HLA-L-209ENST00000420110 1011 ntBASIC17.6■□□□□ 0.41
TUSC1Q2TAM9 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TUSC1Q2TAM9 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TUSC1Q2TAM9 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.6■□□□□ 0.41
TUSC1Q2TAM9 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.6■□□□□ 0.41
TUSC1Q2TAM9 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.6■□□□□ 0.41
TUSC1Q2TAM9 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.6■□□□□ 0.41
TUSC1Q2TAM9 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TUSC1Q2TAM9 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.6■□□□□ 0.41
TUSC1Q2TAM9 OXCT2P1-201ENST00000447263 1535 ntBASIC17.6■□□□□ 0.41
TUSC1Q2TAM9 AC004687.1-201ENST00000579003 1625 ntBASIC17.6■□□□□ 0.41
TUSC1Q2TAM9 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TUSC1Q2TAM9 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.6■□□□□ 0.41
TUSC1Q2TAM9 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TUSC1Q2TAM9 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TUSC1Q2TAM9 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TUSC1Q2TAM9 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TUSC1Q2TAM9 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
TUSC1Q2TAM9 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TUSC1Q2TAM9 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TUSC1Q2TAM9 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TUSC1Q2TAM9 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
TUSC1Q2TAM9 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TUSC1Q2TAM9 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
TUSC1Q2TAM9 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TUSC1Q2TAM9 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TUSC1Q2TAM9 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TUSC1Q2TAM9 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TUSC1Q2TAM9 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
TUSC1Q2TAM9 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TUSC1Q2TAM9 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TUSC1Q2TAM9 AC137761.2-201ENST00000561729 223 ntBASIC17.59■□□□□ 0.41
TUSC1Q2TAM9 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.59■□□□□ 0.41
TUSC1Q2TAM9 AC145350.3-201ENST00000569033 163 ntBASIC17.59■□□□□ 0.41
TUSC1Q2TAM9 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.59■□□□□ 0.41
TUSC1Q2TAM9 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TUSC1Q2TAM9 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.59■□□□□ 0.41
TUSC1Q2TAM9 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TUSC1Q2TAM9 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.59■□□□□ 0.41
TUSC1Q2TAM9 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TUSC1Q2TAM9 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TUSC1Q2TAM9 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.59■□□□□ 0.41
TUSC1Q2TAM9 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.58■□□□□ 0.41
TUSC1Q2TAM9 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.58■□□□□ 0.41
TUSC1Q2TAM9 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TUSC1Q2TAM9 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TUSC1Q2TAM9 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TUSC1Q2TAM9 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.58■□□□□ 0.41
TUSC1Q2TAM9 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TUSC1Q2TAM9 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TUSC1Q2TAM9 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms