Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 LZTR1-210ENST00000464807 566 ntTSL 215.18■□□□□ 0.021e-11■■■□□ 15.8
SRSF1Q07955 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC12.43□□□□□ -0.421e-11■■■□□ 15.8
SRSF1Q07955 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC12.21□□□□□ -0.461e-11■■■□□ 15.8
SRSF1Q07955 HNRNPA1-206ENST00000547708 530 ntTSL 410.09□□□□□ -0.791e-11■■■□□ 15.8
SRSF1Q07955 HNRNPA1-203ENST00000546500 4121 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.111e-11■■■□□ 15.8
SRSF1Q07955 HNRNPA1-210ENST00000550994 569 ntTSL 47.35□□□□□ -1.231e-11■■■□□ 15.8
SRSF1Q07955 HNRNPA1-204ENST00000547276 1539 ntTSL 1 (best) BASIC7.18□□□□□ -1.261e-11■■■□□ 15.8
SRSF1Q07955 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.97□□□□□ -1.291e-11■■■□□ 15.8
SRSF1Q07955 HNRNPA1-208ENST00000548688 711 ntTSL 36.76□□□□□ -1.331e-11■■■□□ 15.8
SRSF1Q07955 HNRNPA1-207ENST00000547870 920 ntTSL 35.42□□□□□ -1.541e-11■■■□□ 15.8
SRSF1Q07955 HNRNPA1-213ENST00000551702 481 ntTSL 33.36□□□□□ -1.871e-11■■■□□ 15.8
SRSF1Q07955 AC004980.1-202ENST00000450661 962 ntTSL 1 (best)23.08■■□□□ 1.294e-9■■■□□ 15.8
SRSF1Q07955 AC004980.1-203ENST00000423084 748 ntTSL 322.32■■□□□ 1.164e-9■■■□□ 15.8
SRSF1Q07955 AC004980.1-204ENST00000429707 299 ntBASIC17.56■□□□□ 0.44e-9■■■□□ 15.8
SRSF1Q07955 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC16.54■□□□□ 0.244e-9■■■□□ 15.8
SRSF1Q07955 PHKG2-209ENST00000565924 908 ntTSL 319.96■□□□□ 0.795e-9■■■□□ 15.7
SRSF1Q07955 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.87■□□□□ 0.455e-9■■■□□ 15.7
SRSF1Q07955 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.74■□□□□ 0.435e-9■■■□□ 15.7
SRSF1Q07955 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.83■□□□□ 0.285e-9■■■□□ 15.7
SRSF1Q07955 PHKG2-208ENST00000565897 1068 ntTSL 516.57■□□□□ 0.245e-9■■■□□ 15.7
SRSF1Q07955 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.94■□□□□ 0.145e-9■■■□□ 15.7
SRSF1Q07955 NARF-203ENST00000374611 1722 ntTSL 514.97□□□□□ -0.015e-9■■■□□ 15.7
SRSF1Q07955 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.85□□□□□ -0.035e-9■■■□□ 15.7
SRSF1Q07955 NARF-208ENST00000577432 866 ntTSL 514.65□□□□□ -0.065e-9■■■□□ 15.7
SRSF1Q07955 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.15e-9■■■□□ 15.7
SRSF1Q07955 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.17□□□□□ -0.145e-9■■■□□ 15.7
SRSF1Q07955 PHKG2-211ENST00000569762 880 ntTSL 1 (best)13.98□□□□□ -0.175e-9■■■□□ 15.7
SRSF1Q07955 PHKG2-207ENST00000564838 1618 ntTSL 213.9□□□□□ -0.185e-9■■■□□ 15.7
SRSF1Q07955 PHKG2-205ENST00000563607 726 ntTSL 213.78□□□□□ -0.25e-9■■■□□ 15.7
SRSF1Q07955 POLE-213ENST00000539357 364 ntTSL 313.77□□□□□ -0.215e-9■■■□□ 15.7
SRSF1Q07955 NARF-220ENST00000582907 1454 ntTSL 513.26□□□□□ -0.295e-9■■■□□ 15.7
SRSF1Q07955 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.355e-9■■■□□ 15.7
SRSF1Q07955 NARF-211ENST00000578820 625 ntTSL 311.22□□□□□ -0.615e-9■■■□□ 15.7
SRSF1Q07955 PHKG2-206ENST00000563913 1791 ntTSL 510.84□□□□□ -0.675e-9■■■□□ 15.7
SRSF1Q07955 NARF-226ENST00000584513 500 ntTSL 39.87□□□□□ -0.835e-9■■■□□ 15.7
SRSF1Q07955 NARF-201ENST00000309794 3949 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.895e-9■■■□□ 15.7
SRSF1Q07955 NARF-209ENST00000577812 2598 ntTSL 59.39□□□□□ -0.915e-9■■■□□ 15.7
SRSF1Q07955 NARF-225ENST00000584445 2484 ntTSL 29.13□□□□□ -0.955e-9■■■□□ 15.7
SRSF1Q07955 NARF-222ENST00000583908 430 ntTSL 38.96□□□□□ -0.985e-9■■■□□ 15.7
SRSF1Q07955 NARF-227ENST00000584965 300 ntTSL 37.36□□□□□ -1.235e-9■■■□□ 15.7
SRSF1Q07955 RABGEF1-209ENST00000607882 2654 ntTSL 211.51□□□□□ -0.573e-7■■■□□ 15.7
SRSF1Q07955 SLC6A8-209ENST00000476466 470 ntTSL 313.4□□□□□ -0.265e-7■■■□□ 15.7
SRSF1Q07955 LZTR1-217ENST00000497716 1031 ntTSL 513.03□□□□□ -0.328e-7■■■□□ 15.7
SRSF1Q07955 LZTR1-208ENST00000461510 413 ntTSL 210.54□□□□□ -0.728e-7■■■□□ 15.7
SRSF1Q07955 RBM33-207ENST00000401878 10149 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.836e-7■■■□□ 15.7
SRSF1Q07955 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.95□□□□□ -1.626e-7■■■□□ 15.7
SRSF1Q07955 ID1-201ENST00000376105 1233 ntBASIC21.23■□□□□ 0.997e-9■■■□□ 15.7
SRSF1Q07955 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.57e-9■■■□□ 15.7
SRSF1Q07955 ARAP1-210ENST00000465814 5612 ntTSL 212.47□□□□□ -0.417e-8■■■□□ 15.7
SRSF1Q07955 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.517e-8■■■□□ 15.7
SRSF1Q07955 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.617e-8■■■□□ 15.7
SRSF1Q07955 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.627e-8■■■□□ 15.7
SRSF1Q07955 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.77e-8■■■□□ 15.7
SRSF1Q07955 ARAP1-205ENST00000426523 4066 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.047e-8■■■□□ 15.7
SRSF1Q07955 ARAP1-207ENST00000429686 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.147e-8■■■□□ 15.7
SRSF1Q07955 ZNF207-201ENST00000321233 2283 ntTSL 1 (best) BASIC9.92□□□□□ -0.821e-8■■■□□ 15.6
SRSF1Q07955 ZNF207-212ENST00000580759 572 ntTSL 59.2□□□□□ -0.941e-8■■■□□ 15.6
SRSF1Q07955 ZNF207-214ENST00000582165 592 ntTSL 58.97□□□□□ -0.971e-8■■■□□ 15.6
SRSF1Q07955 ZNF207-204ENST00000394673 2124 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.031e-8■■■□□ 15.6
SRSF1Q07955 ZNF207-202ENST00000342555 1905 ntTSL 5 BASIC8.19□□□□□ -1.11e-8■■■□□ 15.6
SRSF1Q07955 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC7.02□□□□□ -1.291e-8■■■□□ 15.6
SRSF1Q07955 ZNF207-206ENST00000577324 1005 ntTSL 25.72□□□□□ -1.491e-8■■■□□ 15.6
SRSF1Q07955 ZNF207-213ENST00000581531 3560 ntTSL 55.07□□□□□ -1.61e-8■■■□□ 15.6
SRSF1Q07955 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.731e-8■■■□□ 15.6
SRSF1Q07955 ZNF207-205ENST00000394679 847 ntTSL 34.11□□□□□ -1.751e-8■■■□□ 15.6
SRSF1Q07955 RBM25-205ENST00000527432 3375 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.263e-7■■■□□ 15.6
SRSF1Q07955 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.43e-7■■■□□ 15.6
SRSF1Q07955 RBM25-212ENST00000532683 6848 ntTSL 1 (best)4.7□□□□□ -1.663e-7■■■□□ 15.6
SRSF1Q07955 RBM25-207ENST00000528081 3008 ntTSL 24.48□□□□□ -1.693e-7■■■□□ 15.6
SRSF1Q07955 TFRC-209ENST00000464368 569 ntTSL 49.88□□□□□ -0.835e-16■■■□□ 15.6
SRSF1Q07955 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.45e-7■■■□□ 15.6
SRSF1Q07955 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC12.06□□□□□ -0.485e-7■■■□□ 15.6
SRSF1Q07955 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.645e-7■■■□□ 15.6
SRSF1Q07955 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.785e-7■■■□□ 15.6
SRSF1Q07955 AL390728.4-201ENST00000421406 1465 ntBASIC8.23□□□□□ -1.096e-14■■■□□ 15.6
SRSF1Q07955 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.52e-7■■■□□ 15.6
SRSF1Q07955 PDXDC1-215ENST00000567306 980 ntTSL 56.31□□□□□ -1.45e-9■■■□□ 15.6
SRSF1Q07955 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC5.67□□□□□ -1.55e-9■■■□□ 15.6
SRSF1Q07955 SPAG5-202ENST00000378976 755 ntTSL 54.55□□□□□ -1.683e-6■■■□□ 15.6
SRSF1Q07955 CCDC136-215ENST00000528772 565 ntTSL 411.44□□□□□ -0.587e-9■■■□□ 15.6
SRSF1Q07955 CCDC136-205ENST00000464672 1870 ntAPPRIS ALT2 TSL 210.18□□□□□ -0.787e-9■■■□□ 15.6
SRSF1Q07955 CCDC136-207ENST00000471729 495 ntTSL 39.82□□□□□ -0.847e-9■■■□□ 15.6
SRSF1Q07955 CCDC136-214ENST00000494552 3320 ntAPPRIS ALT2 TSL 1 (best)7.57□□□□□ -1.27e-9■■■□□ 15.6
SRSF1Q07955 CCDC136-209ENST00000480137 3732 ntTSL 26.73□□□□□ -1.337e-9■■■□□ 15.6
SRSF1Q07955 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC12.77□□□□□ -0.363e-9■■■□□ 15.6
SRSF1Q07955 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.483e-9■■■□□ 15.6
SRSF1Q07955 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.613e-9■■■□□ 15.6
SRSF1Q07955 LSS-211ENST00000522411 2523 ntTSL 2 BASIC10.96□□□□□ -0.663e-9■■■□□ 15.6
SRSF1Q07955 ACTB-212ENST00000484841 1032 ntTSL 519.4■□□□□ 0.71e-10■■■□□ 15.6
SRSF1Q07955 ACTB-210ENST00000477812 820 ntTSL 217.74■□□□□ 0.431e-10■■■□□ 15.6
SRSF1Q07955 ACTB-205ENST00000432588 568 ntTSL 415.74■□□□□ 0.111e-10■■■□□ 15.6
SRSF1Q07955 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.121e-10■■■□□ 15.6
SRSF1Q07955 ACTB-207ENST00000462494 2245 ntTSL 512.82□□□□□ -0.361e-10■■■□□ 15.6
SRSF1Q07955 ACTB-204ENST00000425660 1845 ntTSL 1 (best)12.44□□□□□ -0.421e-10■■■□□ 15.6
SRSF1Q07955 ACTB-209ENST00000473257 556 ntTSL 311.14□□□□□ -0.631e-10■■■□□ 15.6
SRSF1Q07955 L3MBTL4-208ENST00000583809 549 ntTSL 420.7■□□□□ 0.97e-7■■■□□ 15.6
SRSF1Q07955 L3MBTL4-206ENST00000581231 568 ntTSL 512.63□□□□□ -0.397e-7■■■□□ 15.6
SRSF1Q07955 L3MBTL4-201ENST00000317931 3560 ntTSL 5 BASIC9.39□□□□□ -0.917e-7■■■□□ 15.6
SRSF1Q07955 L3MBTL4-207ENST00000583054 1002 ntTSL 58.55□□□□□ -1.047e-7■■■□□ 15.6
SRSF1Q07955 L3MBTL4-202ENST00000400104 4534 ntTSL 1 (best) BASIC7.59□□□□□ -1.197e-7■■■□□ 15.6
Retrieved 100 of 14,836 protein–RNA pairs in 76.3 ms