RNA–Protein interactions for RNA: ENST00000494552.5

CCDC136-214, Transcript of coiled-coil domain containing 136, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene CCDC136, Length 3,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136-214ENST00000494552 NISCHQ9Y2I1 1504 aa21.05■□□□□ 0.96
CCDC136-214ENST00000494552 CCDC180Q9P1Z9 1646 aa18.68■□□□□ 0.58
CCDC136-214ENST00000494552 ZCCHC6Q5VYS8 1495 aaKnown RBP17.78■□□□□ 0.44
CCDC136-214ENST00000494552 DCAF1Q9Y4B6 1507 aa17.62■□□□□ 0.41
CCDC136-214ENST00000494552 MYO15BQ96JP2 1530 aa17.43■□□□□ 0.38
CCDC136-214ENST00000494552 SHROOM4Q9ULL8 1493 aa17.29■□□□□ 0.36
CCDC136-214ENST00000494552 NACADO15069 1562 aa17.16■□□□□ 0.34
CCDC136-214ENST00000494552 ABCC9O60706 1549 aa17.06■□□□□ 0.32
CCDC136-214ENST00000494552 SUPT5HO00267 1087 aaKnown RBP17.04■□□□□ 0.32
CCDC136-214ENST00000494552 UNC13AQ9UPW8 1703 aa17.02■□□□□ 0.31
CCDC136-214ENST00000494552 RB1CC1Q8TDY2 1594 aa16.96■□□□□ 0.31
CCDC136-214ENST00000494552 DCAF8L2P0C7V8 631 aa16.92■□□□□ 0.3
CCDC136-214ENST00000494552 SCRIBQ14160 1630 aa16.81■□□□□ 0.28
CCDC136-214ENST00000494552 BICRAQ9NZM4 1560 aa16.64■□□□□ 0.25
CCDC136-214ENST00000494552 CHIC1Q5VXU3 224 aa16.51■□□□□ 0.23
CCDC136-214ENST00000494552 SMARCA4P51532 1647 aa16.28■□□□□ 0.2
CCDC136-214ENST00000494552 CECR2Q9BXF3 1484 aa16.24■□□□□ 0.19
CCDC136-214ENST00000494552 PEG3Q9GZU2 1588 aa16.24■□□□□ 0.19
CCDC136-214ENST00000494552 BAZ1AQ9NRL2 1556 aaPredicted RBP16.24■□□□□ 0.19
CCDC136-214ENST00000494552 MROH2BQ7Z745 1585 aa16.23■□□□□ 0.19
CCDC136-214ENST00000494552 RSF1Q96T23 1441 aaPredicted RBP16.21■□□□□ 0.19
CCDC136-214ENST00000494552 WIZO95785 1651 aa16.17■□□□□ 0.18
CCDC136-214ENST00000494552 PCGF6Q9BYE7 350 aa16.1■□□□□ 0.17
CCDC136-214ENST00000494552 HRCP23327 699 aa16.09■□□□□ 0.17
CCDC136-214ENST00000494552 EIF4G1Q04637 1599 aaKnown RBP16.05■□□□□ 0.16
CCDC136-214ENST00000494552 TOP2AP11388 1531 aaKnown RBP16.03■□□□□ 0.16
CCDC136-214ENST00000494552 LOC105371045A0A1W2PR82 267 aa16.02■□□□□ 0.16
CCDC136-214ENST00000494552 SMARCA2P51531 1590 aa15.91■□□□□ 0.14
CCDC136-214ENST00000494552 TRIM41Q8WV44 630 aa15.9■□□□□ 0.14
CCDC136-214ENST00000494552 HMGXB3Q12766 1538 aa15.89■□□□□ 0.13
CCDC136-214ENST00000494552 PABPN1Q86U42 306 aaKnown RBP eCLIP15.85■□□□□ 0.13
CCDC136-214ENST00000494552 ATAD2BQ9ULI0 1458 aa15.85■□□□□ 0.13
CCDC136-214ENST00000494552 TRIM26Q12899 539 aaPredicted RBP15.81■□□□□ 0.12
CCDC136-214ENST00000494552 PRDM2Q13029 1718 aa15.79■□□□□ 0.12
CCDC136-214ENST00000494552 FAM9AQ8IZU1 332 aaPredicted RBP15.75■□□□□ 0.11
CCDC136-214ENST00000494552 NCAPD3P42695 1498 aa15.74■□□□□ 0.11
CCDC136-214ENST00000494552 CC2D2AQ9P2K1 1620 aa15.73■□□□□ 0.11
CCDC136-214ENST00000494552 CCDC88BA6NC98 1476 aa15.7■□□□□ 0.1
CCDC136-214ENST00000494552 PPARGC1BQ86YN6 1023 aaKnown RBP15.69■□□□□ 0.1
CCDC136-214ENST00000494552 BAZ1BQ9UIG0 1483 aaKnown RBP15.67■□□□□ 0.1
CCDC136-214ENST00000494552 EHMT2Q96KQ7 1210 aa15.61■□□□□ 0.09
CCDC136-214ENST00000494552 ZEB1P37275 1124 aaPredicted RBP15.55■□□□□ 0.08
CCDC136-214ENST00000494552 BIVM-ERCC5R4GMW8 1640 aa15.45■□□□□ 0.06
CCDC136-214ENST00000494552 CFTRP13569 1480 aa15.39■□□□□ 0.05
CCDC136-214ENST00000494552 ABCC8Q09428 1581 aa15.37■□□□□ 0.05
CCDC136-214ENST00000494552 SYNJ1O43426 1573 aa15.35■□□□□ 0.05
CCDC136-214ENST00000494552 TOP2BQ02880 1626 aa15.33■□□□□ 0.04
CCDC136-214ENST00000494552 LAMC3Q9Y6N6 1575 aa15.3■□□□□ 0.04
CCDC136-214ENST00000494552 KIF21AQ7Z4S6 1674 aa15.22■□□□□ 0.03
CCDC136-214ENST00000494552 WDR97A6NE52 1622 aa15.21■□□□□ 0.03
CCDC136-214ENST00000494552 CUX1P39880 1505 aa15.21■□□□□ 0.03
CCDC136-214ENST00000494552 CCER1Q8TC90 406 aaPredicted RBP15.18■□□□□ 0.02
CCDC136-214ENST00000494552 UBTFP17480 764 aaKnown RBP15.17■□□□□ 0.02
CCDC136-214ENST00000494552 CADPSQ9ULU8 1353 aa15.17■□□□□ 0.02
CCDC136-214ENST00000494552 CSRNP3Q8WYN3 585 aa15.17■□□□□ 0.02
CCDC136-214ENST00000494552 EEA1Q15075 1411 aa15.16■□□□□ 0.02
CCDC136-214ENST00000494552 WRNQ14191 1432 aaPredicted RBP eCLIP15.15■□□□□ 0.02
CCDC136-214ENST00000494552 SOGA1O94964 1423 aa15.14■□□□□ 0.01
CCDC136-214ENST00000494552 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.14■□□□□ 0.01
CCDC136-214ENST00000494552 CEP162Q5TB80 1403 aa15.13■□□□□ 0.01
CCDC136-214ENST00000494552 TNIKQ9UKE5 1360 aa15.12■□□□□ 0.01
CCDC136-214ENST00000494552 TTBK1Q5TCY1 1321 aaPredicted RBP15.12■□□□□ 0.01
CCDC136-214ENST00000494552 DNMBPQ6XZF7 1577 aa15.11■□□□□ 0.01
CCDC136-214ENST00000494552 NESP48681 1621 aa15.1■□□□□ 0.01
CCDC136-214ENST00000494552 FANCD2Q9BXW9 1451 aa15.06■□□□□ 0
CCDC136-214ENST00000494552 KIF21BO75037 1637 aa15.05■□□□□ 0
CCDC136-214ENST00000494552 GOLGA3Q08378 1498 aa15.04■□□□□ -0
CCDC136-214ENST00000494552 RUSC2Q8N2Y8 1516 aa15.02■□□□□ -0
CCDC136-214ENST00000494552 THOC2Q8NI27 1593 aaKnown RBP15.02■□□□□ -0
CCDC136-214ENST00000494552 DNAJC5BQ9UF47 199 aa15.01□□□□□ -0.01
CCDC136-214ENST00000494552 URB2Q14146 1524 aaKnown RBP15□□□□□ -0.01
CCDC136-214ENST00000494552 TOPBP1Q92547 1522 aa14.98□□□□□ -0.01
CCDC136-214ENST00000494552 TARBP1Q13395 1621 aaKnown RBP14.97□□□□□ -0.01
CCDC136-214ENST00000494552 ABCA5Q8WWZ7 1642 aa14.97□□□□□ -0.01
CCDC136-214ENST00000494552 CEP164Q9UPV0 1460 aa14.96□□□□□ -0.01
CCDC136-214ENST00000494552 WDR62O43379 1518 aa14.96□□□□□ -0.01
CCDC136-214ENST00000494552 APLP2Q06481 763 aa14.93□□□□□ -0.02
CCDC136-214ENST00000494552 FGD5Q6ZNL6 1462 aa14.93□□□□□ -0.02
CCDC136-214ENST00000494552 ERICH3Q5RHP9 1530 aa14.9□□□□□ -0.02
CCDC136-214ENST00000494552 ABCA10Q8WWZ4 1543 aa14.9□□□□□ -0.02
CCDC136-214ENST00000494552 POLA1P09884 1462 aaPredicted RBP14.89□□□□□ -0.03
CCDC136-214ENST00000494552 PDS5BQ9NTI5 1447 aa14.88□□□□□ -0.03
CCDC136-214ENST00000494552 PBRM1Q86U86 1689 aa14.88□□□□□ -0.03
CCDC136-214ENST00000494552 CLIP1P30622 1438 aa14.88□□□□□ -0.03
CCDC136-214ENST00000494552 DIEXFQ68CQ4 756 aaKnown RBP14.86□□□□□ -0.03
CCDC136-214ENST00000494552 MRC2Q9UBG0 1479 aa14.85□□□□□ -0.03
CCDC136-214ENST00000494552 CUL7Q14999 1698 aa14.84□□□□□ -0.03
CCDC136-214ENST00000494552 RANGAP1P46060 587 aaPredicted RBP14.84□□□□□ -0.03
CCDC136-214ENST00000494552 PRXQ9BXM0 1461 aa14.84□□□□□ -0.03
CCDC136-214ENST00000494552 HNRNPUL2Q1KMD3 747 aaKnown RBP14.81□□□□□ -0.04
CCDC136-214ENST00000494552 VPS8Q8N3P4 1428 aa14.79□□□□□ -0.04
CCDC136-214ENST00000494552 SCAF1Q9H7N4 1312 aaKnown RBP14.79□□□□□ -0.04
CCDC136-214ENST00000494552 CUX2O14529 1486 aa14.78□□□□□ -0.04
CCDC136-214ENST00000494552 CTTNBP2Q8WZ74 1663 aa14.78□□□□□ -0.04
CCDC136-214ENST00000494552 RAPGEF2Q9Y4G8 1499 aa14.78□□□□□ -0.04
CCDC136-214ENST00000494552 CENPBP07199 599 aaPredicted RBP14.76□□□□□ -0.05
CCDC136-214ENST00000494552 ZNF316A6NFI3 1004 aaPredicted RBP14.74□□□□□ -0.05
CCDC136-214ENST00000494552 RAD54L2Q9Y4B4 1467 aa14.73□□□□□ -0.05
CCDC136-214ENST00000494552 ACIN1Q9UKV3 1341 aaKnown RBP14.72□□□□□ -0.05
CCDC136-214ENST00000494552 KIF27Q86VH2 1401 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 720.7 ms