Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
TBC1D3FA6NER0 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.54■□□□□ 0.88
TBC1D3FA6NER0 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TBC1D3FA6NER0 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
TBC1D3FA6NER0 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.54■□□□□ 0.88
TBC1D3FA6NER0 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.54■□□□□ 0.88
TBC1D3FA6NER0 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.54■□□□□ 0.88
TBC1D3FA6NER0 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TBC1D3FA6NER0 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TBC1D3FA6NER0 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TBC1D3FA6NER0 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TBC1D3FA6NER0 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
TBC1D3FA6NER0 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
TBC1D3FA6NER0 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TBC1D3FA6NER0 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TBC1D3FA6NER0 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TBC1D3FA6NER0 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TBC1D3FA6NER0 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.53■□□□□ 0.88
TBC1D3FA6NER0 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TBC1D3FA6NER0 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TBC1D3FA6NER0 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TBC1D3FA6NER0 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TBC1D3FA6NER0 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TBC1D3FA6NER0 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.53■□□□□ 0.88
TBC1D3FA6NER0 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TBC1D3FA6NER0 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TBC1D3FA6NER0 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TBC1D3FA6NER0 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TBC1D3FA6NER0 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TBC1D3FA6NER0 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TBC1D3FA6NER0 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TBC1D3FA6NER0 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.53■□□□□ 0.88
TBC1D3FA6NER0 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TBC1D3FA6NER0 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.53■□□□□ 0.88
TBC1D3FA6NER0 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TBC1D3FA6NER0 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TBC1D3FA6NER0 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.53■□□□□ 0.88
TBC1D3FA6NER0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TBC1D3FA6NER0 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.53■□□□□ 0.88
TBC1D3FA6NER0 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
TBC1D3FA6NER0 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
TBC1D3FA6NER0 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.52■□□□□ 0.88
TBC1D3FA6NER0 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
TBC1D3FA6NER0 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
TBC1D3FA6NER0 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TBC1D3FA6NER0 AC093827.2-201ENST00000512654 315 ntBASIC20.52■□□□□ 0.88
TBC1D3FA6NER0 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.52■□□□□ 0.88
TBC1D3FA6NER0 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.52■□□□□ 0.88
TBC1D3FA6NER0 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TBC1D3FA6NER0 AC105020.6-201ENST00000621523 1217 ntBASIC20.52■□□□□ 0.88
TBC1D3FA6NER0 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TBC1D3FA6NER0 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TBC1D3FA6NER0 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
TBC1D3FA6NER0 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
TBC1D3FA6NER0 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
TBC1D3FA6NER0 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
TBC1D3FA6NER0 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.51■□□□□ 0.87
TBC1D3FA6NER0 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
TBC1D3FA6NER0 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
TBC1D3FA6NER0 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
TBC1D3FA6NER0 AC092368.3-202ENST00000574180 1591 ntBASIC20.51■□□□□ 0.87
TBC1D3FA6NER0 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TBC1D3FA6NER0 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
TBC1D3FA6NER0 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.51■□□□□ 0.87
TBC1D3FA6NER0 AC098590.1-201ENST00000468126 897 ntBASIC20.51■□□□□ 0.87
TBC1D3FA6NER0 RPS2P52-201ENST00000469610 820 ntBASIC20.51■□□□□ 0.87
TBC1D3FA6NER0 PNMA6B-201ENST00000538162 1200 ntBASIC20.51■□□□□ 0.87
TBC1D3FA6NER0 AC142381.4-202ENST00000563973 229 ntBASIC20.51■□□□□ 0.87
TBC1D3FA6NER0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
TBC1D3FA6NER0 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TBC1D3FA6NER0 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TBC1D3FA6NER0 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TBC1D3FA6NER0 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.51■□□□□ 0.87
TBC1D3FA6NER0 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.51■□□□□ 0.87
TBC1D3FA6NER0 PKD1P6-201ENST00000343738 4769 ntBASIC20.5■□□□□ 0.87
TBC1D3FA6NER0 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TBC1D3FA6NER0 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TBC1D3FA6NER0 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TBC1D3FA6NER0 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.5■□□□□ 0.87
TBC1D3FA6NER0 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
TBC1D3FA6NER0 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.5■□□□□ 0.87
TBC1D3FA6NER0 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.5■□□□□ 0.87
TBC1D3FA6NER0 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TBC1D3FA6NER0 AL158047.1-201ENST00000445918 881 ntBASIC20.5■□□□□ 0.87
TBC1D3FA6NER0 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.5■□□□□ 0.87
TBC1D3FA6NER0 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TBC1D3FA6NER0 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.5■□□□□ 0.87
TBC1D3FA6NER0 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.5■□□□□ 0.87
TBC1D3FA6NER0 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.5■□□□□ 0.87
TBC1D3FA6NER0 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TBC1D3FA6NER0 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.5■□□□□ 0.87
TBC1D3FA6NER0 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TBC1D3FA6NER0 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.5■□□□□ 0.87
TBC1D3FA6NER0 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
TBC1D3FA6NER0 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.5■□□□□ 0.87
TBC1D3FA6NER0 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TBC1D3FA6NER0 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
TBC1D3FA6NER0 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TBC1D3FA6NER0 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.49■□□□□ 0.87
TBC1D3FA6NER0 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms