Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
IGHV4-28A0A0C4DH34 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC14.87□□□□□ -0.03
IGHV4-28A0A0C4DH34 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC14.87□□□□□ -0.03
IGHV4-28A0A0C4DH34 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
IGHV4-28A0A0C4DH34 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
IGHV4-28A0A0C4DH34 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
IGHV4-28A0A0C4DH34 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
IGHV4-28A0A0C4DH34 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
IGHV4-28A0A0C4DH34 PARN-205ENST00000539279 1557 ntTSL 2 BASIC14.86□□□□□ -0.03
IGHV4-28A0A0C4DH34 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
IGHV4-28A0A0C4DH34 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC14.86□□□□□ -0.03
IGHV4-28A0A0C4DH34 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
IGHV4-28A0A0C4DH34 AC116050.2-201ENST00000612102 1779 ntBASIC14.86□□□□□ -0.03
IGHV4-28A0A0C4DH34 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
IGHV4-28A0A0C4DH34 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC14.86□□□□□ -0.03
IGHV4-28A0A0C4DH34 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC14.86□□□□□ -0.03
IGHV4-28A0A0C4DH34 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
IGHV4-28A0A0C4DH34 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC14.86□□□□□ -0.03
IGHV4-28A0A0C4DH34 AC069152.1-201ENST00000438030 544 ntBASIC14.86□□□□□ -0.03
IGHV4-28A0A0C4DH34 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC14.86□□□□□ -0.03
IGHV4-28A0A0C4DH34 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC14.86□□□□□ -0.03
IGHV4-28A0A0C4DH34 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC14.86□□□□□ -0.03
IGHV4-28A0A0C4DH34 AC133041.1-202ENST00000642053 222 ntBASIC14.86□□□□□ -0.03
IGHV4-28A0A0C4DH34 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
IGHV4-28A0A0C4DH34 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
IGHV4-28A0A0C4DH34 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
IGHV4-28A0A0C4DH34 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
IGHV4-28A0A0C4DH34 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
IGHV4-28A0A0C4DH34 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC14.86□□□□□ -0.03
IGHV4-28A0A0C4DH34 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
IGHV4-28A0A0C4DH34 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
IGHV4-28A0A0C4DH34 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC14.86□□□□□ -0.03
IGHV4-28A0A0C4DH34 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
IGHV4-28A0A0C4DH34 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
IGHV4-28A0A0C4DH34 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
IGHV4-28A0A0C4DH34 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
IGHV4-28A0A0C4DH34 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
IGHV4-28A0A0C4DH34 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC14.85□□□□□ -0.03
IGHV4-28A0A0C4DH34 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
IGHV4-28A0A0C4DH34 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
IGHV4-28A0A0C4DH34 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
IGHV4-28A0A0C4DH34 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
IGHV4-28A0A0C4DH34 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
IGHV4-28A0A0C4DH34 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
IGHV4-28A0A0C4DH34 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC14.85□□□□□ -0.03
IGHV4-28A0A0C4DH34 SAPCD2P1-201ENST00000395413 1184 ntBASIC14.85□□□□□ -0.03
IGHV4-28A0A0C4DH34 VMO1-204ENST00000441199 741 ntTSL 2 BASIC14.85□□□□□ -0.03
IGHV4-28A0A0C4DH34 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC14.85□□□□□ -0.03
IGHV4-28A0A0C4DH34 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC14.85□□□□□ -0.03
IGHV4-28A0A0C4DH34 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC14.85□□□□□ -0.03
IGHV4-28A0A0C4DH34 RGMA-211ENST00000557420 989 ntTSL 3 BASIC14.85□□□□□ -0.03
IGHV4-28A0A0C4DH34 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC14.85□□□□□ -0.03
IGHV4-28A0A0C4DH34 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
IGHV4-28A0A0C4DH34 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC14.85□□□□□ -0.03
IGHV4-28A0A0C4DH34 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
IGHV4-28A0A0C4DH34 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
IGHV4-28A0A0C4DH34 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
IGHV4-28A0A0C4DH34 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
IGHV4-28A0A0C4DH34 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
IGHV4-28A0A0C4DH34 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
IGHV4-28A0A0C4DH34 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
IGHV4-28A0A0C4DH34 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
IGHV4-28A0A0C4DH34 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
IGHV4-28A0A0C4DH34 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
IGHV4-28A0A0C4DH34 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC14.84□□□□□ -0.03
IGHV4-28A0A0C4DH34 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
IGHV4-28A0A0C4DH34 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
IGHV4-28A0A0C4DH34 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC14.84□□□□□ -0.03
IGHV4-28A0A0C4DH34 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
IGHV4-28A0A0C4DH34 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
IGHV4-28A0A0C4DH34 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
IGHV4-28A0A0C4DH34 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
IGHV4-28A0A0C4DH34 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
IGHV4-28A0A0C4DH34 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC14.84□□□□□ -0.03
IGHV4-28A0A0C4DH34 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
IGHV4-28A0A0C4DH34 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC14.84□□□□□ -0.03
IGHV4-28A0A0C4DH34 AC092118.2-201ENST00000613495 667 ntBASIC14.84□□□□□ -0.03
IGHV4-28A0A0C4DH34 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
IGHV4-28A0A0C4DH34 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
IGHV4-28A0A0C4DH34 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
IGHV4-28A0A0C4DH34 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
IGHV4-28A0A0C4DH34 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
IGHV4-28A0A0C4DH34 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
IGHV4-28A0A0C4DH34 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
IGHV4-28A0A0C4DH34 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
IGHV4-28A0A0C4DH34 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
IGHV4-28A0A0C4DH34 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC14.84□□□□□ -0.03
IGHV4-28A0A0C4DH34 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
IGHV4-28A0A0C4DH34 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
IGHV4-28A0A0C4DH34 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
IGHV4-28A0A0C4DH34 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
IGHV4-28A0A0C4DH34 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.03
IGHV4-28A0A0C4DH34 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
IGHV4-28A0A0C4DH34 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.03
IGHV4-28A0A0C4DH34 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC14.83□□□□□ -0.03
IGHV4-28A0A0C4DH34 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
IGHV4-28A0A0C4DH34 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
IGHV4-28A0A0C4DH34 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC14.83□□□□□ -0.04
IGHV4-28A0A0C4DH34 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
IGHV4-28A0A0C4DH34 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms