Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 MMP3-201ENST00000299855 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
MTHFRP42898 HIGD1B-201ENST00000253410 635 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
MTHFRP42898 OR1N1-201ENST00000304880 936 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
MTHFRP42898 AC074254.1-201ENST00000399152 404 ntTSL 5 BASIC9.89□□□□□ -0.83
MTHFRP42898 SLC25A26-203ENST00000413054 1096 ntTSL 5 BASIC9.89□□□□□ -0.83
MTHFRP42898 HLA-DQB1-AS1-201ENST00000419852 552 ntBASIC9.89□□□□□ -0.83
MTHFRP42898 KRT18P49-201ENST00000427083 832 ntBASIC9.89□□□□□ -0.83
MTHFRP42898 AC092098.1-201ENST00000429245 874 ntBASIC9.89□□□□□ -0.83
MTHFRP42898 AL031729.1-201ENST00000433132 192 ntBASIC9.89□□□□□ -0.83
MTHFRP42898 LSMEM1-202ENST00000439068 730 ntAPPRIS P1 TSL 3 BASIC9.89□□□□□ -0.83
MTHFRP42898 AL031674.1-203ENST00000448013 538 ntTSL 3 BASIC9.89□□□□□ -0.83
MTHFRP42898 AC110800.1-201ENST00000505498 441 ntTSL 2 BASIC9.89□□□□□ -0.83
MTHFRP42898 AC022296.1-201ENST00000512176 682 ntBASIC9.89□□□□□ -0.83
MTHFRP42898 GBP1P1-202ENST00000513638 1234 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
MTHFRP42898 LINC02137-201ENST00000561906 644 ntTSL 3 BASIC9.89□□□□□ -0.83
MTHFRP42898 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC9.89□□□□□ -0.83
MTHFRP42898 LINC01834-201ENST00000567374 385 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
MTHFRP42898 AF001548.2-201ENST00000574212 836 ntTSL 2 BASIC9.89□□□□□ -0.83
MTHFRP42898 ZNF286A-214ENST00000581529 560 ntTSL 4 BASIC9.89□□□□□ -0.83
MTHFRP42898 AC010530.1-201ENST00000602844 569 ntTSL 4 BASIC9.89□□□□□ -0.83
MTHFRP42898 ZFAS1-210ENST00000623640 732 ntTSL 2 BASIC9.89□□□□□ -0.83
MTHFRP42898 AC011472.5-201ENST00000624079 508 ntBASIC9.89□□□□□ -0.83
MTHFRP42898 LINC01670-203ENST00000624859 977 ntTSL 3 BASIC9.89□□□□□ -0.83
MTHFRP42898 AC010223.1-201ENST00000625092 279 ntBASIC9.89□□□□□ -0.83
MTHFRP42898 CAVIN4-201ENST00000307584 2615 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
MTHFRP42898 IFT122-210ENST00000504021 3541 ntTSL 2 BASIC9.89□□□□□ -0.83
MTHFRP42898 RBMS2-207ENST00000552247 1471 ntTSL 5 BASIC9.89□□□□□ -0.83
MTHFRP42898 TRO-204ENST00000375041 3488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
MTHFRP42898 AC005358.2-201ENST00000584772 3679 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
MTHFRP42898 CX3CR1-206ENST00000542107 3215 ntAPPRIS P1 TSL 4 BASIC9.89□□□□□ -0.83
MTHFRP42898 HIVEP1-205ENST00000484210 1602 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
MTHFRP42898 DLGAP1-AS2-201ENST00000572856 2261 ntTSL 2 BASIC9.89□□□□□ -0.83
MTHFRP42898 FCN1-202ENST00000616356 4369 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
MTHFRP42898 MEF2C-209ENST00000504921 7561 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
MTHFRP42898 DDIAS-207ENST00000528759 3278 ntTSL 2 BASIC9.88□□□□□ -0.83
MTHFRP42898 FCGR2A-201ENST00000271450 2412 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
MTHFRP42898 LINC01940-201ENST00000455228 3489 ntTSL 2 BASIC9.88□□□□□ -0.83
MTHFRP42898 ARFIP1-205ENST00000451320 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
MTHFRP42898 NFYA-201ENST00000341376 3811 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
MTHFRP42898 SOX5-215ENST00000545921 2589 ntAPPRIS ALT1 TSL 2 BASIC9.88□□□□□ -0.83
MTHFRP42898 AC233702.10-201ENST00000426261 2780 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
MTHFRP42898 TGOLN2-201ENST00000282120 6419 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
MTHFRP42898 RNF145-209ENST00000520638 2340 ntTSL 2 BASIC9.88□□□□□ -0.83
MTHFRP42898 AC007938.4-201ENST00000610046 4118 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
MTHFRP42898 PAX6-231ENST00000606377 6901 ntAPPRIS P4 TSL 5 BASIC9.88□□□□□ -0.83
MTHFRP42898 ZNF236-201ENST00000253159 8124 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
MTHFRP42898 CD3G-206ENST00000532917 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
MTHFRP42898 SLC16A1-AS1-204ENST00000428411 8757 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
MTHFRP42898 AC005524.1-201ENST00000636857 1674 ntBASIC9.88□□□□□ -0.83
MTHFRP42898 S100A8-201ENST00000368732 495 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
MTHFRP42898 CAPN3-208ENST00000397204 1237 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
MTHFRP42898 HIST1H1PS1-201ENST00000404269 574 ntBASIC9.88□□□□□ -0.83
MTHFRP42898 EPPIN-203ENST00000409554 998 ntTSL 5 BASIC9.88□□□□□ -0.83
MTHFRP42898 LINC01006-203ENST00000425712 661 ntTSL 2 BASIC9.88□□□□□ -0.83
MTHFRP42898 ASS1P11-201ENST00000441309 1216 ntBASIC9.88□□□□□ -0.83
MTHFRP42898 AC022400.2-201ENST00000446730 866 ntTSL 2 BASIC9.88□□□□□ -0.83
MTHFRP42898 AL096855.1-201ENST00000449895 516 ntTSL 3 BASIC9.88□□□□□ -0.83
MTHFRP42898 AC107613.1-201ENST00000450488 1018 ntBASIC9.88□□□□□ -0.83
MTHFRP42898 RN7SL263P-201ENST00000467969 290 ntBASIC9.88□□□□□ -0.83
MTHFRP42898 RN7SL223P-201ENST00000470401 294 ntBASIC9.88□□□□□ -0.83
MTHFRP42898 AC080013.1-205ENST00000477589 1087 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
MTHFRP42898 RPL19P13-201ENST00000483119 583 ntBASIC9.88□□□□□ -0.83
MTHFRP42898 HNRNPA1P23-201ENST00000491091 1133 ntBASIC9.88□□□□□ -0.83
MTHFRP42898 RPL5P3-201ENST00000493817 889 ntBASIC9.88□□□□□ -0.83
MTHFRP42898 LINC02162-201ENST00000512521 574 ntTSL 4 BASIC9.88□□□□□ -0.83
MTHFRP42898 AC044839.4-201ENST00000534128 469 ntTSL 3 BASIC9.88□□□□□ -0.83
MTHFRP42898 COA4-206ENST00000545127 922 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
MTHFRP42898 AC084033.2-201ENST00000551532 967 ntBASIC9.88□□□□□ -0.83
MTHFRP42898 LINC01227-202ENST00000561719 755 ntTSL 2 BASIC9.88□□□□□ -0.83
MTHFRP42898 TMEM170A-204ENST00000567796 734 ntTSL 5 BASIC9.88□□□□□ -0.83
MTHFRP42898 AC018521.4-201ENST00000578239 531 ntTSL 4 BASIC9.88□□□□□ -0.83
MTHFRP42898 AP006565.1-201ENST00000581117 586 ntTSL 2 BASIC9.88□□□□□ -0.83
MTHFRP42898 LINC00635-210ENST00000600240 714 ntTSL 5 BASIC9.88□□□□□ -0.83
MTHFRP42898 SNX18P5-201ENST00000619873 868 ntBASIC9.88□□□□□ -0.83
MTHFRP42898 ZNHIT3-209ENST00000620324 834 ntTSL 2 BASIC9.88□□□□□ -0.83
MTHFRP42898 FLII-230ENST00000628188 156 ntTSL 5 BASIC9.88□□□□□ -0.83
MTHFRP42898 AL139220.2-211ENST00000628234 754 ntTSL 5 BASIC9.88□□□□□ -0.83
MTHFRP42898 NCAM1-213ENST00000531044 2826 ntTSL 5 BASIC9.88□□□□□ -0.83
MTHFRP42898 TOP3A-208ENST00000542570 4116 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
MTHFRP42898 C4orf46-201ENST00000379205 3521 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
MTHFRP42898 RSRC1-202ENST00000312179 1443 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
MTHFRP42898 PPP3CA-205ENST00000507176 1958 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
MTHFRP42898 TGFB3-201ENST00000238682 2522 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
MTHFRP42898 PAQR5-205ENST00000561153 2347 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
MTHFRP42898 CALML3-AS1-202ENST00000543008 4531 ntTSL 5 BASIC9.88□□□□□ -0.83
MTHFRP42898 TRAF1-202ENST00000540010 4303 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
MTHFRP42898 GAREM1-201ENST00000269209 3006 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
MTHFRP42898 ATP9A-201ENST00000311637 7437 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
MTHFRP42898 BBS10-201ENST00000393262 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
MTHFRP42898 ALDH7A1-231ENST00000637206 2466 ntTSL 5 BASIC9.88□□□□□ -0.83
MTHFRP42898 HIF1A-203ENST00000394997 3922 ntAPPRIS ALT1 TSL 1 (best) BASIC9.88□□□□□ -0.83
MTHFRP42898 SP1-201ENST00000327443 2846 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
MTHFRP42898 IDO1-207ENST00000522495 1709 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
MTHFRP42898 HERC3-202ENST00000402738 4974 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
MTHFRP42898 TACC2-210ENST00000369005 9673 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
MTHFRP42898 NSUN7-201ENST00000316607 3546 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
MTHFRP42898 RFX3-201ENST00000302303 1522 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
MTHFRP42898 ACSM3-202ENST00000440284 1517 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
MTHFRP42898 COL4A6-201ENST00000334504 6700 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
MTHFRP42898 SHTN1-207ENST00000615301 6730 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 227.6 ms