RNA–Protein interactions for RNA: ENST00000606377.6

PAX6-231, Transcript of paired box 6, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PAX6, Length 6,901 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-231ENST00000606377 DCAF8L2P0C7V8 631 aa17.6■□□□□ 0.41
PAX6-231ENST00000606377 SUPT5HO00267 1087 aaKnown RBP16.55■□□□□ 0.24
PAX6-231ENST00000606377 NISCHQ9Y2I1 1504 aa16.51■□□□□ 0.23
PAX6-231ENST00000606377 SHROOM4Q9ULL8 1493 aa16.33■□□□□ 0.2
PAX6-231ENST00000606377 EHMT2Q96KQ7 1210 aa16.19■□□□□ 0.18
PAX6-231ENST00000606377 APLP2Q06481 763 aa15.75■□□□□ 0.11
PAX6-231ENST00000606377 FAM9AQ8IZU1 332 aaPredicted RBP15.66■□□□□ 0.1
PAX6-231ENST00000606377 TTBK1Q5TCY1 1321 aaPredicted RBP15.61■□□□□ 0.09
PAX6-231ENST00000606377 RANGAP1P46060 587 aaPredicted RBP15.49■□□□□ 0.07
PAX6-231ENST00000606377 PELP1Q8IZL8 1130 aaKnown RBP15.49■□□□□ 0.07
PAX6-231ENST00000606377 ATP1B4Q9UN42 357 aaPredicted RBP15.36■□□□□ 0.05
PAX6-231ENST00000606377 PCGF6Q9BYE7 350 aa15.34■□□□□ 0.05
PAX6-231ENST00000606377 TRIM41Q8WV44 630 aa15.3■□□□□ 0.04
PAX6-231ENST00000606377 UBTFP17480 764 aaKnown RBP15.18■□□□□ 0.02
PAX6-231ENST00000606377 CCER1Q8TC90 406 aaPredicted RBP15.14■□□□□ 0.01
PAX6-231ENST00000606377 ZEB1P37275 1124 aaPredicted RBP15□□□□□ -0.01
PAX6-231ENST00000606377 CENPBP07199 599 aaPredicted RBP14.96□□□□□ -0.01
PAX6-231ENST00000606377 PPARGC1BQ86YN6 1023 aaKnown RBP14.96□□□□□ -0.01
PAX6-231ENST00000606377 ERICH6Q7L0X2 663 aa14.93□□□□□ -0.02
PAX6-231ENST00000606377 YTHDC1Q96MU7 727 aaKnown RBP14.83□□□□□ -0.04
PAX6-231ENST00000606377 MYT1LQ9UL68 1186 aa14.81□□□□□ -0.04
PAX6-231ENST00000606377 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.8□□□□□ -0.04
PAX6-231ENST00000606377 HNRNPUL2Q1KMD3 747 aaKnown RBP14.8□□□□□ -0.04
PAX6-231ENST00000606377 ITGAEP38570 1179 aa14.76□□□□□ -0.05
PAX6-231ENST00000606377 NEFLP07196 543 aa14.75□□□□□ -0.05
PAX6-231ENST00000606377 POLR3GLQ9BT43 218 aa14.67□□□□□ -0.06
PAX6-231ENST00000606377 TRIM26Q12899 539 aaPredicted RBP14.64□□□□□ -0.07
PAX6-231ENST00000606377 LOC105371045A0A1W2PR82 267 aa14.6□□□□□ -0.07
PAX6-231ENST00000606377 CHIC1Q5VXU3 224 aa14.6□□□□□ -0.07
PAX6-231ENST00000606377 CNGB1Q14028 1251 aaPredicted RBP14.54□□□□□ -0.08
PAX6-231ENST00000606377 PABPN1Q86U42 306 aaKnown RBP eCLIP14.5□□□□□ -0.09
PAX6-231ENST00000606377 ABCC9O60706 1549 aa14.48□□□□□ -0.09
PAX6-231ENST00000606377 SLC4A1APQ9BWU0 796 aaKnown RBP14.45□□□□□ -0.1
PAX6-231ENST00000606377 HRCP23327 699 aa14.41□□□□□ -0.1
PAX6-231ENST00000606377 FAM50AQ14320 339 aaKnown RBP14.37□□□□□ -0.11
PAX6-231ENST00000606377 DAXXQ9UER7 740 aaPredicted RBP14.37□□□□□ -0.11
PAX6-231ENST00000606377 TRIM52Q96A61 297 aa14.29□□□□□ -0.12
PAX6-231ENST00000606377 FBLN2P98095 1184 aa14.25□□□□□ -0.13
PAX6-231ENST00000606377 NEUROD1Q13562 356 aa14.22□□□□□ -0.13
PAX6-231ENST00000606377 ZNF326Q5BKZ1 582 aaKnown RBP14.14□□□□□ -0.15
PAX6-231ENST00000606377 DIEXFQ68CQ4 756 aaKnown RBP14.14□□□□□ -0.15
PAX6-231ENST00000606377 CLSPNQ9HAW4 1339 aa14.13□□□□□ -0.15
PAX6-231ENST00000606377 MYT1Q01538 1121 aa14.11□□□□□ -0.15
PAX6-231ENST00000606377 ARID3CA6NKF2 412 aa14.09□□□□□ -0.15
PAX6-231ENST00000606377 P3H3Q8IVL6 736 aa14.07□□□□□ -0.16
PAX6-231ENST00000606377 ZNF316A6NFI3 1004 aaPredicted RBP14.05□□□□□ -0.16
PAX6-231ENST00000606377 BCANQ96GW7 911 aa14.01□□□□□ -0.17
PAX6-231ENST00000606377 SLC24A1O60721 1099 aa13.97□□□□□ -0.17
PAX6-231ENST00000606377 ANP32CO43423 234 aa13.97□□□□□ -0.17
PAX6-231ENST00000606377 ZNF777Q9ULD5 760 aaPredicted RBP13.96□□□□□ -0.18
PAX6-231ENST00000606377 RTL5Q5HYW3 569 aaPredicted RBP13.92□□□□□ -0.18
PAX6-231ENST00000606377 BCL11AQ9H165 835 aa13.9□□□□□ -0.18
PAX6-231ENST00000606377 SCRIBQ14160 1630 aa13.9□□□□□ -0.18
PAX6-231ENST00000606377 ZBTB47Q9UFB7 747 aaPredicted RBP13.89□□□□□ -0.19
PAX6-231ENST00000606377 CSRNP3Q8WYN3 585 aa13.89□□□□□ -0.19
PAX6-231ENST00000606377 CANXP27824 592 aaKnown RBP13.85□□□□□ -0.19
PAX6-231ENST00000606377 NEFMP07197 916 aa13.82□□□□□ -0.2
PAX6-231ENST00000606377 PLPPR3Q6T4P5 718 aa13.82□□□□□ -0.2
PAX6-231ENST00000606377 CDK11AQ9UQ88 783 aaPredicted RBP13.81□□□□□ -0.2
PAX6-231ENST00000606377 ESF1Q9H501 851 aaKnown RBP13.8□□□□□ -0.2
PAX6-231ENST00000606377 GTF3C3Q9Y5Q9 886 aa13.77□□□□□ -0.2
PAX6-231ENST00000606377 CHGAP10645 457 aaKnown RBP13.77□□□□□ -0.21
PAX6-231ENST00000606377 STAG3Q9UJ98 1225 aa13.75□□□□□ -0.21
PAX6-231ENST00000606377 NPM1P06748 294 aaKnown RBP eCLIP13.71□□□□□ -0.21
PAX6-231ENST00000606377 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.66□□□□□ -0.22
PAX6-231ENST00000606377 TONSLQ96HA7 1378 aa13.65□□□□□ -0.22
PAX6-231ENST00000606377 CHIC2Q9UKJ5 165 aa13.65□□□□□ -0.22
PAX6-231ENST00000606377 ZCCHC6Q5VYS8 1495 aaKnown RBP13.61□□□□□ -0.23
PAX6-231ENST00000606377 NPM2Q86SE8 214 aaKnown RBP13.57□□□□□ -0.24
PAX6-231ENST00000606377 CHMP7Q8WUX9 453 aaPredicted RBP13.57□□□□□ -0.24
PAX6-231ENST00000606377 SALL2Q9Y467 1007 aaPredicted RBP13.56□□□□□ -0.24
PAX6-231ENST00000606377 FAM9BQ8IZU0 186 aa13.55□□□□□ -0.24
PAX6-231ENST00000606377 DDX10Q13206 875 aaKnown RBP13.54□□□□□ -0.24
PAX6-231ENST00000606377 KDM2AQ9Y2K7 1162 aa13.53□□□□□ -0.24
PAX6-231ENST00000606377 ANP32AP39687 249 aaKnown RBP13.53□□□□□ -0.24
PAX6-231ENST00000606377 HNRNPUQ00839 825 aaKnown RBP eCLIP13.51□□□□□ -0.25
PAX6-231ENST00000606377 ACIN1Q9UKV3 1341 aaKnown RBP13.51□□□□□ -0.25
PAX6-231ENST00000606377 TSPY4P0CV99 314 aa13.51□□□□□ -0.25
PAX6-231ENST00000606377 TSPY10P0CW01 314 aa13.51□□□□□ -0.25
PAX6-231ENST00000606377 SENP3Q9H4L4 574 aaPredicted RBP13.51□□□□□ -0.25
PAX6-231ENST00000606377 MTUS2Q5JR59 1369 aa13.5□□□□□ -0.25
PAX6-231ENST00000606377 FKBP8Q14318 412 aa13.49□□□□□ -0.25
PAX6-231ENST00000606377 CCDC180Q9P1Z9 1646 aa13.49□□□□□ -0.25
PAX6-231ENST00000606377 SCAF1Q9H7N4 1312 aaKnown RBP13.49□□□□□ -0.25
PAX6-231ENST00000606377 TMC1Q8TDI8 760 aa13.46□□□□□ -0.26
PAX6-231ENST00000606377 KCNH8Q96L42 1107 aa13.46□□□□□ -0.26
PAX6-231ENST00000606377 RB1CC1Q8TDY2 1594 aa13.44□□□□□ -0.26
PAX6-231ENST00000606377 HSP90AA1P07900 732 aaKnown RBP13.44□□□□□ -0.26
PAX6-231ENST00000606377 WDR43Q15061 677 aaKnown RBP eCLIP13.43□□□□□ -0.26
PAX6-231ENST00000606377 PLEKHG5O94827 1062 aa13.43□□□□□ -0.26
PAX6-231ENST00000606377 RRP7BPQ9NSQ0 103 aa13.42□□□□□ -0.26
PAX6-231ENST00000606377 DCAF1Q9Y4B6 1507 aa13.42□□□□□ -0.26
PAX6-231ENST00000606377 ZBTB7CA1YPR0 619 aa13.41□□□□□ -0.26
PAX6-231ENST00000606377 HIRIP3Q9BW71 556 aaPredicted RBP13.4□□□□□ -0.26
PAX6-231ENST00000606377 CLIP1P30622 1438 aa13.39□□□□□ -0.27
PAX6-231ENST00000606377 A0A0G2JS52 829 aa13.39□□□□□ -0.27
PAX6-231ENST00000606377 UPF2Q9HAU5 1272 aaKnown RBP13.39□□□□□ -0.27
PAX6-231ENST00000606377 PPP1R15AO75807 674 aaPredicted RBP13.36□□□□□ -0.27
PAX6-231ENST00000606377 MRS2Q9HD23 443 aa13.36□□□□□ -0.27
PAX6-231ENST00000606377 C14orf37Q86TY3 774 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms